Wall clock time and date at job start Sun Mar 7 2021 09:04:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35962 * 117.00037 * 2 1 4 4 C 1.39452 * 120.12156 * 179.97438 * 3 2 1 5 5 O 1.34778 * 133.24387 * 0.06524 * 4 3 2 6 6 C 1.34922 * 110.84444 * 179.97438 * 5 4 3 7 7 C 1.46991 * 125.13977 * 180.02562 * 6 5 4 8 8 O 1.21659 * 119.99940 * 180.02562 * 7 6 5 9 9 N 1.34769 * 120.00253 * 0.02562 * 7 6 5 10 10 C 1.46500 * 120.00241 * 180.02562 * 9 7 6 11 11 C 1.53006 * 109.46998 * 180.02562 * 10 9 7 12 12 F 1.39901 * 112.84917 * 48.80659 * 11 10 9 13 13 C 1.53781 * 113.61135 * 179.97438 * 11 10 9 14 14 C 1.53782 * 87.08011 * 139.98001 * 13 11 10 15 15 H 1.08994 * 113.61984 * 219.93302 * 14 13 11 16 16 C 1.53007 * 113.61241 * 89.11500 * 14 13 11 17 17 O 1.42891 * 109.47170 * 175.00040 * 16 14 13 18 18 C 1.53772 * 113.61475 * 277.49649 * 11 10 9 19 19 C 1.35816 * 109.71797 * 0.26687 * 6 5 4 20 20 C 1.40603 * 119.13626 * 180.02562 * 4 3 2 21 21 C 1.39779 * 120.12228 * 359.97438 * 20 4 3 22 22 C 1.50702 * 120.09451 * 180.02562 * 21 20 4 23 23 O 1.42897 * 109.47199 * 285.00007 * 22 21 20 24 24 Si 1.86303 * 109.47011 * 165.00070 * 22 21 20 25 25 C 1.36635 * 119.81063 * 0.02562 * 21 20 4 26 26 C 1.38257 * 120.12194 * 0.02562 * 3 2 1 27 27 H 1.08991 * 109.46933 * 60.00334 * 1 2 3 28 28 H 1.09006 * 109.47041 * 180.02562 * 1 2 3 29 29 H 1.08995 * 109.46802 * 299.99976 * 1 2 3 30 30 H 0.97010 * 119.99849 * 0.02562 * 9 7 6 31 31 H 1.09000 * 109.47175 * 60.00333 * 10 9 7 32 32 H 1.09001 * 109.47297 * 299.99840 * 10 9 7 33 33 H 1.09000 * 113.61578 * 254.52872 * 13 11 10 34 34 H 1.09007 * 113.61310 * 25.35225 * 13 11 10 35 35 H 1.09001 * 109.47026 * 295.00253 * 16 14 13 36 36 H 1.09006 * 109.46795 * 54.99990 * 16 14 13 37 37 H 0.96697 * 114.00263 * 180.02562 * 17 16 14 38 38 H 1.09000 * 113.61922 * 334.57064 * 18 11 10 39 39 H 1.08999 * 113.61689 * 105.47008 * 18 11 10 40 40 H 1.08002 * 126.95475 * 179.69637 * 19 6 5 41 41 H 1.09003 * 109.47118 * 45.00279 * 22 21 20 42 42 H 0.96702 * 114.00108 * 180.02562 * 23 22 21 43 43 H 1.48502 * 109.99978 * 60.00036 * 24 22 21 44 44 H 1.48491 * 110.00107 * 181.31809 * 24 22 21 45 45 H 1.07992 * 119.75121 * 179.97438 * 25 21 20 46 46 H 1.07998 * 119.65793 * 359.97301 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4142 0.3573 0.0000 6 6 5.6318 0.9386 0.0004 7 6 6.9131 0.2184 -0.0006 8 8 7.9596 0.8388 0.0004 9 7 6.9287 -1.1292 -0.0024 10 6 8.2058 -1.8471 -0.0028 11 6 7.9436 -3.3545 -0.0057 12 9 7.0146 -3.7424 -0.9772 13 6 9.2262 -4.2028 -0.0069 14 6 8.5117 -5.1425 0.9787 15 1 9.1575 -5.5132 1.7746 16 6 7.7125 -6.2541 0.2958 17 8 7.1842 -7.1384 1.2862 18 6 7.6559 -3.9323 1.3899 19 6 5.4945 2.2898 0.0072 20 6 4.0554 2.5509 0.0011 21 6 3.2766 3.7116 0.0005 22 6 3.9382 5.0656 0.0005 23 8 4.4601 5.3408 1.3020 24 14 2.6867 6.3684 -0.4548 25 6 1.9136 3.6151 0.0000 26 6 1.2958 2.3726 0.0005 27 1 -0.3633 0.5137 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 6.0943 -1.6239 -0.0036 31 1 8.7739 -1.5785 0.8879 32 1 8.7748 -1.5759 -0.8921 33 1 9.4437 -4.6641 -0.9703 34 1 10.0882 -3.6917 0.4219 35 1 6.8931 -5.8153 -0.2737 36 1 8.3654 -6.8104 -0.3769 37 1 6.6652 -7.8695 0.9241 38 1 8.0880 -3.3478 2.2022 39 1 6.6061 -4.1753 1.5541 40 1 6.2875 3.0230 0.0137 41 1 4.7509 5.0729 -0.7259 42 1 4.9007 6.1984 1.3759 43 1 1.5734 6.3687 0.5279 44 1 3.3338 7.7044 -0.4894 45 1 1.3128 4.5124 0.0000 46 1 0.2175 2.3119 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:29 Heat of formation + Delta-G solvation = -133.173857 kcal Electronic energy + Delta-G solvation = -33036.212523 eV Core-core repulsion = 28196.292408 eV Total energy + Delta-G solvation = -4839.920115 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.140 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -48.97634 -43.80033 -41.07398 -40.48859 -39.81327 -39.02526 -37.26657 -37.22451 -35.88696 -33.71032 -32.10886 -31.42292 -30.20478 -28.57190 -27.24377 -26.99826 -26.23042 -24.74378 -24.05152 -22.86158 -21.99666 -21.74348 -20.31562 -19.82715 -18.97340 -18.69155 -18.58858 -18.37010 -17.81857 -17.56837 -17.24354 -17.02083 -16.82739 -16.59678 -16.35436 -16.20465 -15.88844 -15.69346 -15.59795 -15.36493 -15.03197 -14.69244 -14.57585 -14.31267 -14.23727 -14.01397 -13.95238 -13.77852 -13.51754 -13.40258 -13.25079 -13.18871 -12.55647 -12.50569 -12.39773 -12.08098 -11.93350 -11.80028 -11.74490 -11.44500 -11.34843 -11.06550 -10.82749 -10.51055 -10.47772 -9.87859 -9.04294 -4.90374 -0.72319 0.05651 0.56211 1.12508 1.28578 1.61651 1.76493 1.81356 1.93596 2.10095 2.32903 2.96960 3.03350 3.08449 3.20000 3.21026 3.35653 3.45826 3.52404 3.68620 3.77880 3.86359 3.90971 3.95261 4.10847 4.18229 4.30081 4.34316 4.35276 4.39491 4.40117 4.41426 4.49757 4.53547 4.63712 4.67281 4.74227 4.79383 4.82583 4.83464 4.88436 4.93366 5.00240 5.09230 5.19902 5.25743 5.30383 5.52898 6.05237 6.23126 6.58163 6.67435 6.81071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.333 6.333 3 C 0.137 3.863 4 C 0.021 3.979 5 O -0.183 6.183 6 C -0.037 4.037 7 C 0.606 3.394 8 O -0.539 6.539 9 N -0.706 5.706 10 C 0.110 3.890 11 C 0.076 3.924 12 F -0.196 7.196 13 C -0.129 4.129 14 C -0.116 4.116 15 H 0.096 0.904 16 C 0.082 3.918 17 O -0.594 6.594 18 C -0.146 4.146 19 C -0.106 4.106 20 C -0.098 4.098 21 C -0.064 4.064 22 C -0.092 4.092 23 O -0.557 6.557 24 Si 0.778 3.222 25 C -0.090 4.090 26 C -0.165 4.165 27 H 0.078 0.922 28 H 0.116 0.884 29 H 0.072 0.928 30 H 0.415 0.585 31 H 0.107 0.893 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.131 0.869 35 H 0.052 0.948 36 H 0.060 0.940 37 H 0.397 0.603 38 H 0.116 0.884 39 H 0.073 0.927 40 H 0.178 0.822 41 H 0.087 0.913 42 H 0.395 0.605 43 H -0.281 1.281 44 H -0.286 1.286 45 H 0.162 0.838 46 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.912 -0.293 -2.994 4.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.090 3.910 4 C -0.027 4.027 5 O -0.085 6.085 6 C -0.087 4.087 7 C 0.392 3.608 8 O -0.418 6.418 9 N -0.356 5.356 10 C -0.013 4.013 11 C 0.058 3.942 12 F -0.176 7.176 13 C -0.167 4.167 14 C -0.134 4.134 15 H 0.114 0.886 16 C 0.004 3.996 17 O -0.402 6.402 18 C -0.184 4.184 19 C -0.127 4.127 20 C -0.099 4.099 21 C -0.064 4.064 22 C -0.200 4.200 23 O -0.367 6.367 24 Si 0.681 3.319 25 C -0.107 4.107 26 C -0.183 4.183 27 H 0.097 0.903 28 H 0.134 0.866 29 H 0.091 0.909 30 H 0.251 0.749 31 H 0.125 0.875 32 H 0.105 0.895 33 H 0.111 0.889 34 H 0.149 0.851 35 H 0.070 0.930 36 H 0.078 0.922 37 H 0.247 0.753 38 H 0.135 0.865 39 H 0.092 0.908 40 H 0.195 0.805 41 H 0.105 0.895 42 H 0.245 0.755 43 H -0.208 1.208 44 H -0.213 1.213 45 H 0.179 0.821 46 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -3.486 0.134 -2.270 4.162 hybrid contribution 0.069 -0.270 0.402 0.489 sum -3.418 -0.136 -1.868 3.897 Atomic orbital electron populations 1.23496 0.75283 1.06052 1.03198 1.86147 1.24371 1.25751 1.88454 1.17968 0.86142 0.86821 1.00021 1.19201 0.88260 0.87101 1.08143 1.84018 1.12808 1.35112 1.76559 1.21924 0.83986 0.92800 1.09978 1.16574 0.85126 0.82351 0.76782 1.90893 1.31121 1.68068 1.51763 1.45735 1.11310 1.05258 1.73339 1.22080 0.85370 0.88621 1.05270 1.22311 0.90762 0.92815 0.88335 1.92834 1.67787 1.92018 1.64958 1.23586 0.95965 0.95637 1.01490 1.22304 0.97855 0.93724 0.99542 0.88601 1.22141 0.96897 0.90674 0.89874 1.86403 1.73447 1.43326 1.37062 1.23708 1.02045 0.97196 0.95455 1.22861 0.95198 0.94340 1.00285 1.19598 0.92608 0.92696 1.05032 1.18667 0.93076 0.92277 1.02391 1.25149 1.06209 1.00640 0.87967 1.86570 1.77343 1.42542 1.30260 0.93943 0.76616 0.73756 0.87557 1.20842 0.93022 0.98794 0.98065 1.21353 1.01856 0.89462 1.05654 0.90320 0.86573 0.90914 0.74876 0.87545 0.89506 0.88884 0.85102 0.92980 0.92214 0.75297 0.86529 0.90781 0.80452 0.89532 0.75474 1.20769 1.21328 0.82123 0.80164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.33 -1.54 10.50 -93.12 -0.98 -2.52 16 3 C 0.14 0.75 6.70 22.57 0.15 0.90 16 4 C 0.02 0.20 7.35 23.14 0.17 0.37 16 5 O -0.18 -1.92 10.28 -13.38 -0.14 -2.06 16 6 C -0.04 -0.35 7.07 24.00 0.17 -0.18 16 7 C 0.61 5.35 7.80 86.54 0.67 6.03 16 8 O -0.54 -7.28 16.83 -4.22 -0.07 -7.35 16 9 N -0.71 -2.64 5.46 -466.78 -2.55 -5.19 16 10 C 0.11 -0.02 5.36 86.38 0.46 0.44 16 11 C 0.08 -0.11 1.65 -10.27 -0.02 -0.13 16 12 F -0.20 -0.60 15.01 44.97 0.68 0.08 16 13 C -0.13 0.62 7.13 31.12 0.22 0.84 16 14 C -0.12 0.18 4.20 -10.25 -0.04 0.14 16 15 H 0.10 -0.11 8.14 -2.39 -0.02 -0.13 16 16 C 0.08 0.00 6.66 71.98 0.48 0.48 16 17 O -0.59 -1.39 13.66 -148.98 -2.03 -3.43 16 18 C -0.15 0.23 7.07 31.13 0.22 0.45 16 19 C -0.11 -0.93 10.68 23.79 0.25 -0.68 16 20 C -0.10 -0.82 6.16 -20.24 -0.12 -0.95 16 21 C -0.06 -0.27 5.30 -19.87 -0.11 -0.37 16 22 C -0.09 -0.06 2.70 71.24 0.19 0.13 16 23 O -0.56 -1.96 12.86 -148.98 -1.92 -3.88 16 24 Si 0.78 -2.63 30.20 68.60 2.07 -0.56 16 25 C -0.09 -0.03 8.62 22.02 0.19 0.16 16 26 C -0.16 0.06 9.03 22.40 0.20 0.26 16 27 H 0.08 -0.68 7.66 -2.39 -0.02 -0.70 16 28 H 0.12 -0.90 8.14 -2.38 -0.02 -0.92 16 29 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 30 H 0.41 1.14 7.90 -92.70 -0.73 0.41 16 31 H 0.11 -0.23 7.94 -2.39 -0.02 -0.25 16 32 H 0.09 0.01 8.14 -2.39 -0.02 0.00 16 33 H 0.09 -0.48 8.10 -2.39 -0.02 -0.50 16 34 H 0.13 -1.14 8.10 -2.38 -0.02 -1.16 16 35 H 0.05 0.05 6.31 -2.39 -0.02 0.04 16 36 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 37 H 0.40 -2.29 9.12 -74.06 -0.68 -2.97 16 38 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 39 H 0.07 0.09 8.10 -2.39 -0.02 0.07 16 40 H 0.18 1.15 8.06 -2.91 -0.02 1.13 16 41 H 0.09 -0.17 7.96 -2.39 -0.02 -0.18 16 42 H 0.39 -1.86 8.74 -74.06 -0.65 -2.51 16 43 H -0.28 -0.36 6.75 99.48 0.67 0.31 16 44 H -0.29 -0.31 7.11 99.48 0.71 0.39 16 45 H 0.16 -0.71 4.85 -2.91 -0.01 -0.72 16 46 H 0.18 -1.39 6.26 -2.91 -0.02 -1.41 16 Total: 0.00 -24.61 389.24 -1.71 -26.31 By element: Atomic # 1 Polarization: -9.36 SS G_CDS: -0.98 Total: -10.34 kcal Atomic # 6 Polarization: 4.72 SS G_CDS: 4.21 Total: 8.93 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -2.55 Total: -5.19 kcal Atomic # 8 Polarization: -14.09 SS G_CDS: -5.14 Total: -19.23 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.68 Total: 0.08 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: 2.07 Total: -0.56 kcal Total: -24.61 -1.71 -26.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.861 kcal (2) G-P(sol) polarization free energy of solvation -24.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.174 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds