Wall clock time and date at job start Sun Mar 7 2021 09:04:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33825 * 122.45040 * 2 1 4 4 C 1.50696 * 124.52226 * 0.03976 * 3 2 1 5 5 O 1.42902 * 109.47275 * 330.00620 * 4 3 2 6 6 Si 1.86298 * 109.47507 * 209.99943 * 4 3 2 7 7 S 1.70616 * 110.95442 * 180.02562 * 3 2 1 8 8 C 1.75838 * 91.56389 * 0.02562 * 7 3 2 9 9 C 1.46580 * 125.45795 * 179.97438 * 8 7 3 10 10 O 1.21696 * 120.00155 * 180.02562 * 9 8 7 11 11 N 1.34777 * 120.00053 * 0.02930 * 9 8 7 12 12 C 1.46500 * 120.00148 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47195 * 179.97438 * 12 11 9 14 14 F 1.39897 * 112.84853 * 316.20183 * 13 12 11 15 15 C 1.53782 * 113.68757 * 87.46615 * 13 12 11 16 16 C 1.53780 * 87.07780 * 139.99118 * 15 13 12 17 17 H 1.09004 * 113.69037 * 220.00629 * 16 15 13 18 18 C 1.52999 * 113.61263 * 89.11550 * 16 15 13 19 19 O 1.42903 * 109.47256 * 87.50448 * 18 16 15 20 20 C 1.53776 * 87.08254 * 334.56594 * 16 15 13 21 21 C 1.36645 * 109.08078 * 0.26306 * 8 7 3 22 22 H 1.08996 * 109.47208 * 89.99287 * 1 2 3 23 23 H 1.08996 * 109.47295 * 210.00385 * 1 2 3 24 24 H 1.09001 * 109.47139 * 330.00238 * 1 2 3 25 25 H 1.09003 * 109.46756 * 90.00114 * 4 3 2 26 26 H 0.96699 * 113.99694 * 179.97438 * 5 4 3 27 27 H 1.48502 * 109.99333 * 60.00273 * 6 4 3 28 28 H 1.48492 * 110.00232 * 181.31983 * 6 4 3 29 29 H 0.97001 * 119.99606 * 359.97438 * 11 9 8 30 30 H 1.09003 * 109.46810 * 60.00192 * 12 11 9 31 31 H 1.08992 * 109.47295 * 300.00230 * 12 11 9 32 32 H 1.08997 * 113.61384 * 25.44226 * 15 13 12 33 33 H 1.08997 * 113.61292 * 254.53939 * 15 13 12 34 34 H 1.08997 * 109.47286 * 327.50008 * 18 16 15 35 35 H 1.09008 * 109.47201 * 207.49789 * 18 16 15 36 36 H 0.96700 * 114.00311 * 180.02562 * 19 18 16 37 37 H 1.09006 * 113.61047 * 139.98212 * 20 16 15 38 38 H 1.09000 * 113.61971 * 270.79888 * 20 16 15 39 39 H 1.08002 * 123.34773 * 179.73729 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6356 2.5162 0.0009 5 8 0.3749 2.4984 -0.6719 6 14 2.7920 3.6831 -0.8776 7 16 3.8970 0.7893 -0.0007 8 6 3.5937 -0.9428 -0.0018 9 6 4.6231 -1.9863 -0.0033 10 8 4.3001 -3.1596 -0.0045 11 7 5.9273 -1.6463 -0.0034 12 6 6.9561 -2.6893 -0.0044 13 6 8.3412 -2.0393 -0.0050 14 9 8.4372 -0.9658 -0.8969 15 6 8.8749 -1.7210 1.4017 16 6 10.2506 -2.1913 0.9006 17 1 10.8065 -2.7772 1.6326 18 6 11.0883 -1.0757 0.2726 19 8 11.8394 -0.4127 1.2916 20 6 9.4951 -3.0483 -0.1288 21 6 2.2446 -1.1600 -0.0075 22 1 -0.3633 0.0001 -1.0276 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8900 0.5138 25 1 1.4941 2.8501 1.0288 26 1 -0.0631 3.3597 -0.7091 27 1 2.9930 3.2387 -2.2802 28 1 2.2371 5.0603 -0.8558 29 1 6.1846 -0.7111 -0.0029 30 1 6.8452 -3.3081 -0.8948 31 1 6.8457 -3.3094 0.8851 32 1 8.4543 -2.3551 2.1821 33 1 8.8405 -0.6607 1.6522 34 1 10.4296 -0.3589 -0.2178 35 1 11.7710 -1.5033 -0.4618 36 1 12.3947 0.3084 0.9648 37 1 9.9615 -3.0595 -1.1139 38 1 9.2453 -4.0458 0.2326 39 1 1.8019 -2.1451 -0.0134 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:34 Heat of formation + Delta-G solvation = -105.158708 kcal Electronic energy + Delta-G solvation = -24086.703904 eV Core-core repulsion = 20230.967528 eV Total energy + Delta-G solvation = -3855.736376 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.098 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -48.97688 -40.84504 -39.99339 -39.56544 -37.58758 -37.20266 -35.59112 -32.43032 -30.40124 -30.14399 -27.50200 -27.16257 -25.82675 -24.20949 -22.87392 -21.75823 -20.33447 -20.01021 -19.19730 -18.76929 -18.40515 -17.64772 -17.23794 -16.92549 -16.81148 -16.36897 -16.21975 -15.94124 -15.59776 -15.41397 -15.12026 -14.76214 -14.65410 -14.41827 -14.21127 -14.12932 -13.78921 -13.55547 -13.31658 -13.17838 -13.10281 -12.91932 -12.57252 -12.50021 -12.12558 -11.95924 -11.89108 -11.63877 -11.40947 -11.11794 -10.87045 -10.83678 -10.25862 -9.60125 -9.34286 -5.22774 -0.57083 0.30195 0.72630 1.03101 1.37156 1.47848 1.82262 1.93897 2.21212 2.86999 2.98564 3.07368 3.08787 3.16864 3.37660 3.58812 3.77110 3.80295 4.12398 4.13130 4.26553 4.30014 4.36314 4.41675 4.43718 4.49564 4.52050 4.58025 4.62822 4.73592 4.80860 4.91792 4.93405 4.96802 5.08702 5.12887 5.24712 5.44704 5.51680 6.25026 6.31112 6.62171 7.08035 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.090 4.090 3 C -0.196 4.196 4 C -0.033 4.033 5 O -0.524 6.524 6 Si 0.658 3.342 7 S 0.205 5.795 8 C -0.265 4.265 9 C 0.596 3.404 10 O -0.525 6.525 11 N -0.726 5.726 12 C 0.114 3.886 13 C 0.077 3.923 14 F -0.183 7.183 15 C -0.146 4.146 16 C -0.111 4.111 17 H 0.097 0.903 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.141 4.141 21 C -0.045 4.045 22 H 0.071 0.929 23 H 0.060 0.940 24 H 0.078 0.922 25 H 0.088 0.912 26 H 0.382 0.618 27 H -0.242 1.242 28 H -0.242 1.242 29 H 0.403 0.597 30 H 0.084 0.916 31 H 0.093 0.907 32 H 0.105 0.895 33 H 0.087 0.913 34 H 0.058 0.942 35 H 0.050 0.950 36 H 0.383 0.617 37 H 0.088 0.912 38 H 0.111 0.889 39 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.491 3.816 1.486 4.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.103 4.103 3 C -0.315 4.315 4 C -0.144 4.144 5 O -0.332 6.332 6 Si 0.556 3.444 7 S 0.473 5.527 8 C -0.384 4.384 9 C 0.382 3.618 10 O -0.402 6.402 11 N -0.378 5.378 12 C -0.010 4.010 13 C 0.058 3.942 14 F -0.164 7.164 15 C -0.184 4.184 16 C -0.129 4.129 17 H 0.115 0.885 18 C 0.007 3.993 19 O -0.379 6.379 20 C -0.179 4.179 21 C -0.079 4.079 22 H 0.090 0.910 23 H 0.079 0.921 24 H 0.096 0.904 25 H 0.106 0.894 26 H 0.230 0.770 27 H -0.166 1.166 28 H -0.165 1.165 29 H 0.238 0.762 30 H 0.102 0.898 31 H 0.111 0.889 32 H 0.123 0.877 33 H 0.105 0.895 34 H 0.077 0.923 35 H 0.068 0.932 36 H 0.230 0.770 37 H 0.107 0.893 38 H 0.129 0.871 39 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.559 3.396 1.094 5.039 hybrid contribution -2.065 0.429 -0.670 2.213 sum 1.494 3.825 0.424 4.128 Atomic orbital electron populations 1.20511 0.88649 1.02500 1.02791 1.18701 0.98547 0.90526 1.02496 1.23298 0.98376 0.98576 1.11223 1.24016 0.91470 0.97542 1.01386 1.86687 1.31683 1.35565 1.79270 0.95520 0.86039 0.78669 0.84197 1.82676 1.02077 0.98587 1.69310 1.24508 0.97867 0.96756 1.19300 1.16890 0.81352 0.87444 0.76089 1.90862 1.81560 1.18128 1.49677 1.45669 1.05284 1.10445 1.76429 1.21861 0.84029 0.90538 1.04562 1.22250 0.95153 0.86420 0.90395 1.92841 1.96911 1.56981 1.69640 1.23687 0.95670 1.04079 0.94964 1.22252 0.95295 0.96715 0.98662 0.88506 1.22072 0.93766 0.93974 0.89502 1.86448 1.62624 1.52384 1.36422 1.23570 0.94451 0.98577 1.01306 1.20710 0.90856 1.00139 0.96166 0.90986 0.92098 0.90366 0.89433 0.76952 1.16569 1.16493 0.76229 0.89773 0.88853 0.87672 0.89464 0.92336 0.93161 0.76987 0.89339 0.87081 0.82679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.09 8.70 36.00 0.31 0.23 16 2 C -0.09 -0.18 5.75 -106.45 -0.61 -0.79 16 3 C -0.20 -0.19 5.57 -35.86 -0.20 -0.39 16 4 C -0.03 0.03 2.75 36.00 0.10 0.13 16 5 O -0.52 0.29 9.81 -35.23 -0.35 -0.06 16 6 Si 0.66 -0.90 31.31 -169.99 -5.32 -6.22 16 7 S 0.21 -0.04 19.80 -107.50 -2.13 -2.17 16 8 C -0.26 -0.62 6.45 -36.79 -0.24 -0.86 16 9 C 0.60 2.00 7.78 -12.90 -0.10 1.90 16 10 O -0.52 -3.49 16.84 5.19 0.09 -3.40 16 11 N -0.73 -0.49 5.45 -61.65 -0.34 -0.83 16 12 C 0.11 -0.05 5.43 -4.04 -0.02 -0.07 16 13 C 0.08 -0.11 1.73 -89.81 -0.16 -0.26 16 14 F -0.18 -0.04 14.79 2.25 0.03 -0.01 16 15 C -0.15 0.26 7.07 -25.92 -0.18 0.07 16 16 C -0.11 0.15 4.20 -89.81 -0.38 -0.23 16 17 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 18 C 0.08 -0.07 6.65 37.16 0.25 0.18 16 19 O -0.57 -0.13 13.66 -35.23 -0.48 -0.61 16 20 C -0.14 0.34 7.12 -25.92 -0.18 0.16 16 21 C -0.05 -0.12 9.80 -40.44 -0.40 -0.51 16 22 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 23 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 24 H 0.08 0.05 6.41 -51.93 -0.33 -0.28 16 25 H 0.09 -0.25 7.96 -51.93 -0.41 -0.66 16 26 H 0.38 -1.71 8.74 45.56 0.40 -1.31 16 27 H -0.24 -0.53 7.11 56.52 0.40 -0.13 16 28 H -0.24 0.00 7.11 56.52 0.40 0.41 16 29 H 0.40 -0.32 7.14 -40.82 -0.29 -0.62 16 30 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.09 -0.09 7.85 -51.93 -0.41 -0.50 16 32 H 0.10 -0.28 7.90 -51.93 -0.41 -0.69 16 33 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 34 H 0.06 -0.05 6.31 -51.93 -0.33 -0.37 16 35 H 0.05 -0.08 8.14 -51.92 -0.42 -0.50 16 36 H 0.38 -1.46 9.12 45.56 0.42 -1.05 16 37 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 38 H 0.11 -0.42 8.10 -51.93 -0.42 -0.84 16 39 H 0.16 0.36 8.06 -52.49 -0.42 -0.06 16 LS Contribution 339.36 15.07 5.11 5.11 Total: 0.00 -8.52 339.36 -9.55 -18.07 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -4.36 Total: -9.43 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -1.81 Total: -0.46 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.34 Total: -0.83 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.74 Total: -4.07 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.32 Total: -6.22 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.13 Total: -2.17 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.52 -9.55 -18.07 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.085 kcal (2) G-P(sol) polarization free energy of solvation -8.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds