Wall clock time and date at job start Sun Mar 7 2021 09:04:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.46626 * 2 1 4 4 C 1.50701 * 109.47080 * 240.00031 * 2 1 3 5 5 C 1.32764 * 124.71132 * 299.99284 * 4 2 1 6 6 C 1.44426 * 113.08152 * 180.02562 * 5 4 2 7 7 C 1.47198 * 123.45872 * 179.97438 * 6 5 4 8 8 O 1.21636 * 120.00118 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99681 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99741 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.46889 * 179.97438 * 10 9 7 12 12 F 1.39900 * 112.90784 * 48.74893 * 11 10 9 13 13 C 1.53777 * 113.61002 * 179.97438 * 11 10 9 14 14 C 1.53781 * 87.08336 * 89.11664 * 13 11 10 15 15 H 1.09002 * 113.61228 * 270.88201 * 14 13 11 16 16 C 1.53000 * 113.61707 * 140.06298 * 14 13 11 17 17 O 1.42898 * 109.47043 * 176.53192 * 16 14 13 18 18 C 1.53775 * 113.61584 * 277.49246 * 11 10 9 19 19 C 1.36002 * 113.07929 * 0.24690 * 6 5 4 20 20 S 1.70448 * 110.81909 * 359.62458 * 19 6 5 21 21 H 0.96696 * 114.00150 * 60.00615 * 1 2 3 22 22 H 1.08993 * 109.46899 * 119.99828 * 2 1 3 23 23 H 1.48497 * 110.00044 * 59.99985 * 3 2 1 24 24 H 1.48500 * 109.99858 * 181.32058 * 3 2 1 25 25 H 1.08006 * 123.46173 * 0.02562 * 5 4 2 26 26 H 0.96995 * 120.00500 * 359.97438 * 9 7 6 27 27 H 1.09001 * 109.47319 * 59.99915 * 10 9 7 28 28 H 1.08995 * 109.46703 * 299.99823 * 10 9 7 29 29 H 1.08997 * 113.61941 * 334.56371 * 13 11 10 30 30 H 1.09005 * 113.61136 * 203.66536 * 13 11 10 31 31 H 1.09001 * 109.47043 * 296.52693 * 16 14 13 32 32 H 1.08992 * 109.47277 * 56.52863 * 16 14 13 33 33 H 0.96703 * 113.99884 * 180.02562 * 17 16 14 34 34 H 1.08993 * 113.61636 * 156.33278 * 18 11 10 35 35 H 1.09008 * 113.61006 * 25.43521 * 18 11 10 36 36 H 1.07999 * 124.58918 * 179.73514 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6690 -1.9763 -1.5326 6 6 2.2783 -2.4007 -2.7714 7 6 2.1365 -3.7584 -3.3222 8 8 1.4786 -4.5905 -2.7270 9 7 2.7365 -4.0796 -4.4855 10 6 2.5958 -5.4311 -5.0334 11 6 3.3678 -5.5302 -6.3506 12 9 4.6718 -5.0324 -6.2564 13 6 3.2843 -6.9166 -7.0106 14 6 2.0207 -6.4124 -7.7275 15 1 1.1024 -6.5830 -7.1655 16 6 1.9190 -6.8689 -9.1843 17 8 0.6803 -6.4212 -9.7384 18 6 2.5893 -4.9925 -7.5629 19 6 3.0012 -1.4188 -3.3738 20 16 2.9451 0.0206 -2.4627 21 1 -0.3933 0.4416 -0.7651 22 1 1.7923 -0.5138 0.8900 23 1 1.5613 2.4679 1.2085 24 1 3.5345 1.7704 -0.0322 25 1 1.0623 -2.6224 -0.9155 26 1 3.2614 -3.4162 -4.9599 27 1 1.5418 -5.6423 -5.2136 28 1 2.9950 -6.1546 -4.3226 29 1 3.0929 -7.7253 -6.3053 30 1 4.1135 -7.1296 -7.6854 31 1 2.7460 -6.4473 -9.7557 32 1 1.9646 -7.9570 -9.2281 33 1 0.5477 -6.6757 -10.6619 34 1 3.2284 -4.6796 -8.3884 35 1 1.8367 -4.2479 -7.3031 36 1 3.5368 -1.5349 -4.3045 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:35 Heat of formation + Delta-G solvation = -110.218228 kcal Electronic energy + Delta-G solvation = -21977.958139 eV Core-core repulsion = 18277.539986 eV Total energy + Delta-G solvation = -3700.418154 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.082 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.78248 -41.17276 -40.07065 -38.83212 -37.28159 -37.10194 -35.68506 -32.04982 -30.00140 -27.51958 -27.03915 -26.97319 -25.08614 -22.87372 -22.09816 -20.81234 -20.10723 -19.04386 -18.29707 -18.16778 -17.92366 -17.38010 -16.96663 -16.71619 -16.37385 -16.15241 -16.03928 -15.69873 -15.47129 -14.99881 -14.87495 -14.48864 -14.43884 -14.14274 -13.88219 -13.69065 -13.60577 -13.37525 -12.82163 -12.68612 -12.38041 -12.30570 -12.15086 -11.96277 -11.54867 -11.37593 -11.13752 -10.84011 -10.62133 -10.41056 -10.01514 -9.47893 -5.12677 -0.38438 0.35816 0.66920 0.77683 1.21995 1.59880 1.87273 1.91919 2.17944 2.99026 3.07032 3.21358 3.25360 3.38448 3.45160 3.64374 3.83542 3.89337 3.94589 4.22133 4.26050 4.33074 4.35483 4.40375 4.50447 4.58188 4.64803 4.66881 4.67907 4.71173 4.89410 4.95648 4.99728 5.12379 5.17615 5.31210 6.28187 6.68373 6.88021 6.99341 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.038 4.038 3 Si 0.740 3.260 4 C -0.248 4.248 5 C -0.075 4.075 6 C -0.184 4.184 7 C 0.578 3.422 8 O -0.580 6.580 9 N -0.712 5.712 10 C 0.120 3.880 11 C 0.079 3.921 12 F -0.205 7.205 13 C -0.134 4.134 14 C -0.110 4.110 15 H 0.097 0.903 16 C 0.084 3.916 17 O -0.597 6.597 18 C -0.141 4.141 19 C -0.192 4.192 20 S 0.257 5.743 21 H 0.397 0.603 22 H 0.114 0.886 23 H -0.273 1.273 24 H -0.254 1.254 25 H 0.134 0.866 26 H 0.414 0.586 27 H 0.092 0.908 28 H 0.076 0.924 29 H 0.095 0.905 30 H 0.113 0.887 31 H 0.060 0.940 32 H 0.060 0.940 33 H 0.398 0.602 34 H 0.105 0.895 35 H 0.081 0.919 36 H 0.200 0.800 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.621 3.236 -7.252 8.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.150 4.150 3 Si 0.642 3.358 4 C -0.365 4.365 5 C -0.104 4.104 6 C -0.202 4.202 7 C 0.365 3.635 8 O -0.461 6.461 9 N -0.364 5.364 10 C -0.004 4.004 11 C 0.061 3.939 12 F -0.186 7.186 13 C -0.172 4.172 14 C -0.128 4.128 15 H 0.116 0.884 16 C 0.007 3.993 17 O -0.406 6.406 18 C -0.179 4.179 19 C -0.330 4.330 20 S 0.523 5.477 21 H 0.247 0.753 22 H 0.132 0.868 23 H -0.198 1.198 24 H -0.179 1.179 25 H 0.151 0.849 26 H 0.251 0.749 27 H 0.110 0.890 28 H 0.095 0.905 29 H 0.114 0.886 30 H 0.131 0.869 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.247 0.753 34 H 0.124 0.876 35 H 0.100 0.900 36 H 0.217 0.783 Dipole moment (debyes) X Y Z Total from point charges 3.320 4.615 -5.477 7.894 hybrid contribution -0.246 -2.346 -0.208 2.368 sum 3.074 2.268 -5.685 6.850 Atomic orbital electron populations 1.86502 1.16941 1.82226 1.50359 1.24713 0.85219 1.10347 0.94691 0.94146 0.79471 0.74348 0.87874 1.24926 1.08655 0.98795 1.04087 1.20953 0.99159 0.95062 0.95202 1.20055 1.06772 0.94531 0.98813 1.17894 0.78260 0.87054 0.80294 1.90799 1.42514 1.51861 1.60906 1.45550 1.53252 1.14322 1.23321 1.21643 1.01313 0.84445 0.93015 1.22601 0.78242 0.98107 0.94974 1.92848 1.39313 1.89037 1.97383 1.23592 0.98718 0.95190 0.99730 1.22374 0.98212 0.95930 0.96328 0.88448 1.22181 0.86009 0.98535 0.92586 1.86436 1.39723 1.81182 1.33225 1.23714 0.99443 0.98024 0.96673 1.26166 1.02483 0.98564 1.05810 1.82901 1.44604 1.09605 1.10554 0.75279 0.86837 1.19825 1.17915 0.84869 0.74887 0.89019 0.90530 0.88619 0.86878 0.92172 0.92193 0.75251 0.87648 0.90016 0.78332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.67 12.85 -148.98 -1.91 -2.59 16 2 C -0.04 0.01 2.95 71.24 0.21 0.22 16 3 Si 0.74 -2.55 30.91 68.60 2.12 -0.43 16 4 C -0.25 -0.14 5.68 24.51 0.14 0.00 16 5 C -0.07 -0.42 9.91 22.67 0.22 -0.19 16 6 C -0.18 -0.75 5.98 -19.87 -0.12 -0.86 16 7 C 0.58 4.62 7.79 86.60 0.67 5.30 16 8 O -0.58 -9.70 16.80 -4.14 -0.07 -9.77 16 9 N -0.71 -1.13 5.44 -466.58 -2.54 -3.67 16 10 C 0.12 0.11 5.24 86.38 0.45 0.56 16 11 C 0.08 -0.18 1.83 -10.27 -0.02 -0.19 16 12 F -0.21 -0.27 16.82 44.97 0.76 0.49 16 13 C -0.13 0.66 7.12 31.12 0.22 0.88 16 14 C -0.11 0.38 3.66 -10.25 -0.04 0.35 16 15 H 0.10 -0.15 7.65 -2.39 -0.02 -0.16 16 16 C 0.08 -0.36 6.88 71.98 0.49 0.13 16 17 O -0.60 0.47 13.66 -148.98 -2.03 -1.56 16 18 C -0.14 0.50 7.09 31.14 0.22 0.72 16 19 C -0.19 0.59 10.38 67.30 0.70 1.28 16 20 S 0.26 -1.18 20.18 -56.49 -1.14 -2.32 16 21 H 0.40 -2.86 8.70 -74.06 -0.64 -3.51 16 22 H 0.11 0.14 7.96 -2.39 -0.02 0.12 16 23 H -0.27 -0.90 7.11 99.48 0.71 -0.19 16 24 H -0.25 0.12 7.11 99.48 0.71 0.83 16 25 H 0.13 1.27 8.06 -2.91 -0.02 1.24 16 26 H 0.41 -1.42 6.68 -92.71 -0.62 -2.04 16 27 H 0.09 0.13 7.34 -2.39 -0.02 0.11 16 28 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 29 H 0.10 -0.56 8.10 -2.39 -0.02 -0.58 16 30 H 0.11 -0.74 8.10 -2.38 -0.02 -0.76 16 31 H 0.06 -0.39 7.88 -2.39 -0.02 -0.41 16 32 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 33 H 0.40 -3.56 9.12 -74.06 -0.68 -4.24 16 34 H 0.11 -0.49 7.92 -2.39 -0.02 -0.51 16 35 H 0.08 -0.22 8.10 -2.38 -0.02 -0.24 16 36 H 0.20 -1.89 7.01 -2.91 -0.02 -1.91 16 Total: 0.00 -21.69 324.29 -2.41 -24.11 By element: Atomic # 1 Polarization: -11.68 SS G_CDS: -0.76 Total: -12.44 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 3.16 Total: 8.19 kcal Atomic # 7 Polarization: -1.13 SS G_CDS: -2.54 Total: -3.67 kcal Atomic # 8 Polarization: -9.90 SS G_CDS: -4.02 Total: -13.92 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.76 Total: 0.49 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: 2.12 Total: -0.43 kcal Atomic # 16 Polarization: -1.18 SS G_CDS: -1.14 Total: -2.32 kcal Total: -21.69 -2.41 -24.11 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.110 kcal (2) G-P(sol) polarization free energy of solvation -21.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds