Wall clock time and date at job start Sun Mar 7 2021 09:04:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36761 * 125.80222 * 2 1 4 4 C 1.47258 * 126.94463 * 359.97438 * 3 2 1 5 5 O 1.21625 * 119.99832 * 0.02562 * 4 3 2 6 6 N 1.34776 * 120.00219 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00215 * 180.02562 * 6 4 3 8 8 C 1.53006 * 109.47352 * 179.97438 * 7 6 4 9 9 F 1.39901 * 112.84568 * 50.33215 * 8 7 6 10 10 C 1.53781 * 113.61570 * 181.52938 * 8 7 6 11 11 C 1.53780 * 87.07624 * 139.98161 * 10 8 7 12 12 H 1.09010 * 113.61089 * 219.92895 * 11 10 8 13 13 C 1.53004 * 113.61246 * 89.12100 * 11 10 8 14 14 O 1.42907 * 109.46802 * 174.99462 * 13 11 10 15 15 C 1.53780 * 113.61448 * 279.14082 * 8 7 6 16 16 C 1.46692 * 106.11577 * 180.24331 * 3 2 1 17 17 C 1.34488 * 106.33037 * 359.56976 * 16 3 2 18 18 C 1.50706 * 125.57513 * 180.14940 * 17 16 3 19 19 O 1.42896 * 109.47022 * 245.33421 * 18 17 16 20 20 Si 1.86298 * 109.46820 * 5.33207 * 18 17 16 21 21 N 1.34658 * 125.79592 * 179.97438 * 2 1 3 22 22 H 1.08991 * 109.47489 * 89.99948 * 1 2 3 23 23 H 1.08997 * 109.47009 * 210.00333 * 1 2 3 24 24 H 1.09001 * 109.46576 * 330.00013 * 1 2 3 25 25 H 0.97003 * 120.00269 * 0.02562 * 6 4 3 26 26 H 1.09004 * 109.46989 * 60.00336 * 7 6 4 27 27 H 1.08991 * 109.47390 * 300.00098 * 7 6 4 28 28 H 1.08994 * 113.60887 * 254.53194 * 10 8 7 29 29 H 1.09002 * 113.61213 * 25.35044 * 10 8 7 30 30 H 1.08997 * 109.46817 * 294.99127 * 13 11 10 31 31 H 1.08999 * 109.47271 * 54.99683 * 13 11 10 32 32 H 0.96695 * 113.99325 * 179.97438 * 14 13 11 33 33 H 1.09000 * 113.61461 * 334.56153 * 15 8 7 34 34 H 1.08995 * 113.61894 * 105.46890 * 15 8 7 35 35 H 1.08001 * 126.83699 * 179.73963 * 16 3 2 36 36 H 1.08996 * 109.46897 * 125.33005 * 18 17 16 37 37 H 0.96702 * 114.00328 * 59.99684 * 19 18 17 38 38 H 1.48493 * 110.00103 * 180.02562 * 20 18 17 39 39 H 1.48504 * 110.00283 * 301.32359 * 20 18 17 40 40 H 0.97000 * 124.85640 * 0.04410 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5155 -0.0005 5 8 0.6840 2.7838 -0.0006 6 7 2.7851 3.5053 -0.0010 7 6 2.3506 4.9044 -0.0009 8 6 3.5769 5.8193 -0.0009 9 9 4.5045 5.4846 -0.9933 10 6 3.2284 7.3166 0.0368 11 6 4.4073 7.4860 1.0096 12 1 4.2046 8.1811 1.8245 13 6 5.7419 7.7600 0.3133 14 8 6.7476 8.0172 1.2955 15 6 4.2045 6.0082 1.3903 16 6 3.6883 0.6150 -0.0060 17 6 3.6096 -0.7275 0.0006 18 6 4.7819 -1.6745 0.0012 19 8 4.7950 -2.4170 -1.2197 20 14 6.3644 -0.7035 0.1545 21 7 2.2947 -1.0922 0.0005 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8899 0.5139 24 1 -0.3632 0.8900 0.5139 25 1 3.7312 3.2913 -0.0013 26 1 1.7525 5.0990 0.8893 27 1 1.7518 5.0989 -0.8906 28 1 3.3735 7.8227 -0.9175 29 1 2.2573 7.5277 0.4846 30 1 6.0272 6.8913 -0.2800 31 1 5.6403 8.6278 -0.3385 32 1 7.6219 8.1991 0.9247 33 1 3.5013 5.8612 2.2101 34 1 5.1364 5.4598 1.5271 35 1 4.5891 1.2108 -0.0115 36 1 4.6939 -2.3611 0.8431 37 1 4.8714 -1.8688 -2.0127 38 1 7.5282 -1.6258 0.1556 39 1 6.4808 0.2590 -0.9704 40 1 1.9733 -2.0074 0.0003 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_9865296.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:50 Heat of formation + Delta-G solvation = -99.951959 kcal Electronic energy + Delta-G solvation = -24588.398864 eV Core-core repulsion = 20706.536253 eV Total energy + Delta-G solvation = -3881.862611 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.88834 -42.47179 -40.28584 -39.62242 -37.93480 -37.18057 -35.42843 -32.91957 -32.30509 -30.16277 -29.00015 -27.20462 -26.99341 -25.40780 -23.42282 -22.54074 -21.48683 -20.77247 -20.07005 -19.22891 -18.50497 -17.61468 -17.36471 -17.06747 -16.82035 -16.60968 -16.47837 -16.00988 -15.83278 -15.40963 -15.38640 -15.16336 -15.06422 -14.78755 -14.39131 -14.06950 -13.95931 -13.80723 -13.58816 -13.49088 -13.41762 -13.26642 -13.00909 -12.49449 -12.24817 -11.93459 -11.84694 -11.56671 -11.34341 -10.92804 -10.84659 -10.70157 -10.09350 -9.85976 -9.18324 -5.01800 0.77919 1.07875 1.20227 1.55685 1.81596 2.06649 2.42223 2.63303 2.91598 3.06567 3.17910 3.23209 3.27405 3.42802 3.51052 3.83561 3.85357 4.06574 4.15832 4.17960 4.33282 4.34553 4.41598 4.45911 4.47652 4.55010 4.60720 4.64447 4.68001 4.70670 4.79102 4.85555 4.94094 5.04002 5.17415 5.21920 5.48790 5.65589 5.85420 6.24459 6.36253 6.63908 6.64154 7.42624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.122 3.878 3 C -0.237 4.237 4 C 0.596 3.404 5 O -0.547 6.547 6 N -0.726 5.726 7 C 0.116 3.884 8 C 0.077 3.923 9 F -0.185 7.185 10 C -0.141 4.141 11 C -0.111 4.111 12 H 0.096 0.904 13 C 0.085 3.915 14 O -0.573 6.573 15 C -0.146 4.146 16 C -0.157 4.157 17 C -0.012 4.012 18 C -0.056 4.056 19 O -0.534 6.534 20 Si 0.711 3.289 21 N -0.536 5.536 22 H 0.080 0.920 23 H 0.066 0.934 24 H 0.104 0.896 25 H 0.403 0.597 26 H 0.090 0.910 27 H 0.079 0.921 28 H 0.087 0.913 29 H 0.110 0.890 30 H 0.058 0.942 31 H 0.050 0.950 32 H 0.382 0.618 33 H 0.104 0.896 34 H 0.086 0.914 35 H 0.149 0.851 36 H 0.118 0.882 37 H 0.380 0.620 38 H -0.255 1.255 39 H -0.254 1.254 40 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.614 0.660 1.428 2.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.003 3.997 3 C -0.246 4.246 4 C 0.385 3.615 5 O -0.426 6.426 6 N -0.378 5.378 7 C -0.009 4.009 8 C 0.058 3.942 9 F -0.165 7.165 10 C -0.179 4.179 11 C -0.129 4.129 12 H 0.114 0.886 13 C 0.007 3.993 14 O -0.379 6.379 15 C -0.183 4.183 16 C -0.181 4.181 17 C -0.121 4.121 18 C -0.166 4.166 19 O -0.341 6.341 20 Si 0.610 3.390 21 N -0.131 5.131 22 H 0.099 0.901 23 H 0.085 0.915 24 H 0.122 0.878 25 H 0.238 0.762 26 H 0.108 0.892 27 H 0.098 0.902 28 H 0.105 0.895 29 H 0.129 0.871 30 H 0.076 0.924 31 H 0.068 0.932 32 H 0.230 0.770 33 H 0.123 0.877 34 H 0.105 0.895 35 H 0.167 0.833 36 H 0.136 0.864 37 H 0.228 0.772 38 H -0.179 1.179 39 H -0.179 1.179 40 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 0.987 0.317 1.834 2.107 hybrid contribution 0.474 -0.714 -1.689 1.894 sum 1.461 -0.397 0.145 1.521 Atomic orbital electron populations 1.20644 0.86587 1.04566 1.03818 1.20447 0.93854 0.85372 1.00027 1.19931 0.92726 0.91900 1.20045 1.17273 0.85101 0.83970 0.75150 1.90760 1.16522 1.84354 1.51009 1.45576 1.10216 1.05281 1.76696 1.21749 0.94940 0.80041 1.04136 1.22239 0.88029 0.96032 0.87863 1.92845 1.67162 1.93418 1.63088 1.23555 0.99833 0.93142 1.01407 1.22288 0.93580 0.97792 0.99286 0.88580 1.22073 0.87364 0.99855 0.90012 1.86449 1.21639 1.93812 1.35971 1.23682 1.02571 0.96703 0.95355 1.21787 0.96128 0.92630 1.07592 1.20720 0.84969 0.94772 1.11654 1.24816 1.02856 0.99062 0.89842 1.86595 1.95373 1.36577 1.15540 0.94434 0.74093 0.80377 0.90085 1.41591 1.05469 1.08794 1.57253 0.90132 0.91490 0.87761 0.76220 0.89230 0.90244 0.89458 0.87147 0.92366 0.93215 0.77033 0.87712 0.89523 0.83346 0.86427 0.77231 1.17923 1.17854 0.74360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.02 9.88 36.01 0.36 0.33 16 2 C 0.12 0.15 7.17 -81.88 -0.59 -0.43 16 3 C -0.24 -0.50 6.29 -103.35 -0.65 -1.15 16 4 C 0.60 1.92 7.81 -12.59 -0.10 1.82 16 5 O -0.55 -3.27 14.81 5.26 0.08 -3.19 16 6 N -0.73 -0.56 5.47 -61.44 -0.34 -0.89 16 7 C 0.12 -0.02 5.35 -4.04 -0.02 -0.04 16 8 C 0.08 -0.08 1.63 -89.80 -0.15 -0.23 16 9 F -0.18 -0.15 15.08 2.25 0.03 -0.11 16 10 C -0.14 0.30 7.13 -25.92 -0.18 0.11 16 11 C -0.11 0.12 4.20 -89.72 -0.38 -0.26 16 12 H 0.10 -0.07 8.14 -51.92 -0.42 -0.49 16 13 C 0.08 -0.05 6.65 37.16 0.25 0.20 16 14 O -0.57 -0.27 13.66 -35.23 -0.48 -0.75 16 15 C -0.15 0.22 7.08 -25.83 -0.18 0.04 16 16 C -0.16 -0.02 9.03 -37.50 -0.34 -0.36 16 17 C -0.01 0.00 6.47 -81.86 -0.53 -0.53 16 18 C -0.06 0.07 3.08 36.01 0.11 0.18 16 19 O -0.53 -0.09 12.88 -35.23 -0.45 -0.55 16 20 Si 0.71 -1.39 30.58 -169.99 -5.20 -6.59 16 21 N -0.54 0.20 5.90 -5.42 -0.03 0.17 16 22 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 23 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 24 H 0.10 0.21 6.47 -51.93 -0.34 -0.13 16 25 H 0.40 -0.28 7.35 -40.82 -0.30 -0.58 16 26 H 0.09 -0.05 7.98 -51.93 -0.41 -0.47 16 27 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 28 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 29 H 0.11 -0.38 8.10 -51.93 -0.42 -0.80 16 30 H 0.06 -0.02 6.31 -51.93 -0.33 -0.35 16 31 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 32 H 0.38 -1.37 9.12 45.56 0.42 -0.95 16 33 H 0.10 -0.25 7.99 -51.93 -0.41 -0.67 16 34 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 35 H 0.15 -0.28 5.88 -52.49 -0.31 -0.59 16 36 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 37 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 38 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 39 H -0.25 0.00 7.11 56.52 0.40 0.40 16 40 H 0.42 -0.98 8.96 -40.82 -0.37 -1.34 16 LS Contribution 336.10 15.07 5.06 5.06 Total: 0.00 -8.72 336.10 -8.37 -17.08 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -4.64 Total: -9.93 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -2.40 Total: -0.31 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -0.37 Total: -0.72 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.86 Total: -4.48 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.03 Total: -0.11 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.20 Total: -6.59 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -8.72 -8.37 -17.08 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_9865296.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.868 kcal (2) G-P(sol) polarization free energy of solvation -8.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.084 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds