Wall clock time and date at job start Sun Mar 7 2021 09:30:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45206 * 109.47564 * 2 1 4 4 C 1.34230 * 117.00115 * 179.97438 * 3 2 1 5 5 O 1.20823 * 119.99724 * 0.02562 * 4 3 2 6 6 C 1.50697 * 119.99616 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.85148 * 48.80853 * 6 4 3 8 8 C 1.53787 * 113.60917 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.07923 * 140.06705 * 8 6 4 10 10 F 1.39895 * 113.61242 * 220.01912 * 9 8 6 11 11 C 1.52998 * 113.61395 * 89.11282 * 9 8 6 12 12 N 1.46504 * 109.47013 * 179.97438 * 11 9 8 13 13 C 1.34776 * 120.00069 * 179.97438 * 12 11 9 14 14 O 1.21704 * 119.99788 * 0.02562 * 13 12 11 15 15 C 1.46675 * 120.00096 * 180.02562 * 13 12 11 16 16 C 1.37874 * 126.23066 * 179.71846 * 15 13 12 17 17 C 1.39841 * 107.08156 * 179.85118 * 16 15 13 18 18 C 1.50696 * 126.06689 * 180.14038 * 17 16 15 19 19 O 1.42906 * 109.47381 * 65.29954 * 18 17 16 20 20 Si 1.86303 * 109.47246 * 185.30133 * 18 17 16 21 21 C 1.35456 * 107.86305 * 0.41278 * 17 16 15 22 22 N 1.35530 * 108.87119 * 359.74770 * 21 17 16 23 23 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 24 24 H 1.08999 * 109.46807 * 300.00155 * 1 2 3 25 25 H 1.09003 * 109.46752 * 59.99610 * 1 2 3 26 26 H 1.08997 * 109.47484 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47305 * 239.99862 * 2 1 3 28 28 H 1.09007 * 109.47251 * 120.00374 * 2 1 3 29 29 H 1.09004 * 113.61202 * 254.61458 * 8 6 4 30 30 H 1.08994 * 113.61447 * 25.51889 * 8 6 4 31 31 H 1.09004 * 109.47533 * 300.00135 * 11 9 8 32 32 H 1.09004 * 109.47128 * 60.00451 * 11 9 8 33 33 H 0.96999 * 119.99633 * 0.02562 * 12 11 9 34 34 H 1.07995 * 126.46376 * 359.96199 * 16 15 13 35 35 H 1.08999 * 109.47246 * 305.30085 * 18 17 16 36 36 H 0.96698 * 113.99140 * 60.00210 * 19 18 17 37 37 H 1.48499 * 110.00112 * 180.02562 * 20 18 17 38 38 H 1.48501 * 109.99754 * 301.31603 * 20 18 17 39 39 H 1.08005 * 125.56042 * 179.70162 * 21 17 16 40 40 H 0.96999 * 125.67137 * 179.97438 * 22 21 17 41 41 H 1.09006 * 113.61307 * 270.88660 * 23 9 8 42 42 H 1.09007 * 113.61642 * 139.98417 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4710 3.5818 0.7553 8 6 5.4584 2.9679 0.0001 9 6 5.3567 4.1434 -0.9863 10 9 6.3097 4.1002 -2.0096 11 6 5.2766 5.5105 -0.3042 12 7 5.1836 6.5596 -1.3226 13 6 5.1016 7.8529 -0.9523 14 8 5.1054 8.1493 0.2281 15 6 5.0080 8.9032 -1.9719 16 6 4.9134 10.2588 -1.7390 17 6 4.8500 10.8865 -2.9871 18 6 4.7424 12.3699 -3.2296 19 8 5.9315 13.0154 -2.7697 20 14 4.5291 12.6872 -5.0530 21 6 4.8965 9.9241 -3.9391 22 7 4.9924 8.7145 -3.3353 23 6 3.9865 3.5783 -1.3963 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 1.8934 -0.5139 -0.8900 28 1 1.8934 -0.5139 0.8900 29 1 5.8896 3.2419 0.9630 30 1 5.9129 2.0753 -0.4298 31 1 4.3952 5.5461 0.3362 32 1 6.1706 5.6686 0.2990 33 1 5.1802 6.3233 -2.2634 34 1 4.8939 10.7446 -0.7747 35 1 3.8822 12.7650 -2.6890 36 1 6.7382 12.7124 -3.2084 37 1 4.4223 14.1467 -5.3055 38 1 5.6801 12.1252 -5.8043 39 1 4.8619 10.0930 -5.0053 40 1 5.0416 7.8583 -3.7885 41 1 4.0387 2.8525 -2.2079 42 1 3.2294 4.3451 -1.5608 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_10543058.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:30:13 Heat of formation + Delta-G solvation = -127.950323 kcal Electronic energy + Delta-G solvation = -27287.483122 eV Core-core repulsion = 22957.498078 eV Total energy + Delta-G solvation = -4329.985044 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.136 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.95600 -42.52801 -41.91721 -40.39767 -39.43785 -37.75816 -37.55835 -35.71086 -32.82903 -32.65772 -31.08763 -29.54195 -27.41510 -27.02700 -26.18948 -24.18264 -23.68460 -22.31923 -21.31377 -20.89862 -20.62988 -19.87249 -19.25002 -18.12057 -17.74902 -17.69361 -17.25162 -17.16565 -16.75633 -16.58303 -16.30090 -15.96295 -15.88100 -15.54131 -15.39110 -14.98671 -14.79340 -14.70637 -14.43062 -14.32950 -14.02235 -13.83579 -13.79802 -13.68269 -13.46660 -13.08945 -12.85092 -12.69293 -12.58563 -12.41556 -12.31605 -11.81693 -11.73391 -11.61111 -11.45850 -11.26851 -10.49210 -10.42962 -10.00926 -9.36327 -4.96418 0.35088 1.01906 1.31067 1.48503 1.49776 1.58536 1.74565 1.93479 2.00798 2.29968 2.65315 2.85278 2.88627 3.04464 3.27911 3.50310 3.66887 3.71781 3.85646 3.87299 3.91605 3.92243 3.99753 4.02792 4.21442 4.24580 4.30044 4.33654 4.38758 4.48427 4.55244 4.65458 4.71672 4.72989 4.87246 4.89285 4.94882 4.99247 5.06372 5.35768 5.53792 5.75090 6.12253 6.28591 6.53592 6.62077 6.99309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.128 4.128 9 C 0.082 3.918 10 F -0.190 7.190 11 C 0.120 3.880 12 N -0.732 5.732 13 C 0.594 3.406 14 O -0.521 6.521 15 C -0.060 4.060 16 C -0.072 4.072 17 C -0.209 4.209 18 C -0.040 4.040 19 O -0.530 6.530 20 Si 0.683 3.317 21 C 0.038 3.962 22 N -0.535 5.535 23 C -0.136 4.136 24 H 0.068 0.932 25 H 0.067 0.933 26 H 0.082 0.918 27 H 0.071 0.929 28 H 0.072 0.928 29 H 0.099 0.901 30 H 0.118 0.882 31 H 0.097 0.903 32 H 0.091 0.909 33 H 0.399 0.601 34 H 0.151 0.849 35 H 0.116 0.884 36 H 0.374 0.626 37 H -0.258 1.258 38 H -0.261 1.261 39 H 0.176 0.824 40 H 0.419 0.581 41 H 0.105 0.895 42 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.337 -2.821 -4.349 6.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.317 3.683 5 O -0.388 6.388 6 C -0.128 4.128 7 H 0.154 0.846 8 C -0.166 4.166 9 C 0.063 3.937 10 F -0.170 7.170 11 C -0.004 4.004 12 N -0.385 5.385 13 C 0.382 3.618 14 O -0.396 6.396 15 C -0.172 4.172 16 C -0.098 4.098 17 C -0.216 4.216 18 C -0.151 4.151 19 O -0.336 6.336 20 Si 0.584 3.416 21 C -0.099 4.099 22 N -0.131 5.131 23 C -0.174 4.174 24 H 0.087 0.913 25 H 0.087 0.913 26 H 0.101 0.899 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.117 0.883 30 H 0.136 0.864 31 H 0.115 0.885 32 H 0.109 0.891 33 H 0.233 0.767 34 H 0.169 0.831 35 H 0.134 0.866 36 H 0.222 0.778 37 H -0.183 1.183 38 H -0.186 1.186 39 H 0.193 0.807 40 H 0.256 0.744 41 H 0.124 0.876 42 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.203 -2.423 -3.855 6.197 hybrid contribution 1.263 -0.861 -0.407 1.582 sum -2.940 -3.284 -4.263 6.132 Atomic orbital electron populations 1.21827 0.92198 1.03360 1.03717 1.23123 0.95701 0.79607 1.02856 1.86509 1.24064 1.32982 1.83602 1.23188 0.80860 0.91871 0.72418 1.90706 1.60541 1.42734 1.44806 1.22322 0.97224 0.92114 1.01133 0.84621 1.23619 0.93541 0.98461 1.01014 1.22478 0.87834 0.95855 0.87521 1.92892 1.66023 1.97389 1.60666 1.21660 1.04975 0.82946 0.90770 1.45665 1.76796 1.05873 1.10122 1.17007 0.76213 0.80950 0.87659 1.90898 1.49751 1.81988 1.16966 1.20309 1.19402 0.95309 0.82166 1.21238 0.99828 0.90153 0.98628 1.19846 1.12953 0.95683 0.93104 1.24331 0.90361 0.88658 1.11741 1.86614 1.16551 1.65354 1.65111 0.95406 0.88633 0.82977 0.74547 1.21918 1.05653 0.83775 0.98572 1.41935 1.56523 1.08785 1.05865 1.23630 0.96511 1.01107 0.96165 0.91290 0.91343 0.89912 0.91036 0.90957 0.88257 0.86414 0.88534 0.89125 0.76717 0.83104 0.86649 0.77847 1.18302 1.18558 0.80693 0.74383 0.87618 0.88300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 10.29 37.16 0.38 0.74 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.19 10.22 -39.26 -0.40 -0.60 16 4 C 0.47 0.33 7.49 36.00 0.27 0.60 16 5 O -0.50 -1.85 15.65 -18.75 -0.29 -2.15 16 6 C -0.11 0.27 3.91 -90.96 -0.36 -0.09 16 7 H 0.14 -0.59 7.65 -51.93 -0.40 -0.99 16 8 C -0.13 0.28 6.89 -25.91 -0.18 0.10 16 9 C 0.08 -0.21 1.83 -89.81 -0.16 -0.37 16 10 F -0.19 0.07 16.82 2.25 0.04 0.10 16 11 C 0.12 -0.25 5.24 -4.04 -0.02 -0.27 16 12 N -0.73 1.21 5.46 -61.61 -0.34 0.87 16 13 C 0.59 0.92 7.79 -12.86 -0.10 0.82 16 14 O -0.52 -2.82 16.88 5.19 0.09 -2.74 16 15 C -0.06 -0.03 7.06 -81.98 -0.58 -0.61 16 16 C -0.07 -0.12 10.59 -39.12 -0.41 -0.54 16 17 C -0.21 0.04 5.43 -105.02 -0.57 -0.53 16 18 C -0.04 0.01 3.02 36.00 0.11 0.12 16 19 O -0.53 -0.89 12.88 -35.23 -0.45 -1.34 16 20 Si 0.68 -1.25 30.60 -169.99 -5.20 -6.46 16 21 C 0.04 -0.09 10.45 -16.91 -0.18 -0.27 16 22 N -0.53 1.46 5.99 -9.39 -0.06 1.40 16 23 C -0.14 0.46 7.09 -25.92 -0.18 0.27 16 24 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 25 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 27 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 30 H 0.12 -0.07 7.44 -51.93 -0.39 -0.46 16 31 H 0.10 -0.27 7.34 -51.93 -0.38 -0.65 16 32 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.40 -1.54 7.31 -40.82 -0.30 -1.83 16 34 H 0.15 0.39 8.06 -52.49 -0.42 -0.03 16 35 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 36 H 0.37 -0.46 8.70 45.56 0.40 -0.07 16 37 H -0.26 -0.52 7.11 56.52 0.40 -0.11 16 38 H -0.26 0.08 7.11 56.52 0.40 0.48 16 39 H 0.18 -0.91 6.21 -52.48 -0.33 -1.23 16 40 H 0.42 -2.45 8.19 -40.82 -0.33 -2.78 16 41 H 0.11 -0.30 8.10 -51.93 -0.42 -0.72 16 42 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 LS Contribution 363.98 15.07 5.49 5.49 Total: 0.00 -10.63 363.98 -8.44 -19.07 By element: Atomic # 1 Polarization: -8.27 SS G_CDS: -5.56 Total: -13.83 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -1.75 Total: 0.18 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -0.39 Total: 2.27 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -1.06 Total: -6.82 kcal Atomic # 9 Polarization: 0.07 SS G_CDS: 0.04 Total: 0.10 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.20 Total: -6.46 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -10.63 -8.44 -19.07 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_10543058.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.877 kcal (2) G-P(sol) polarization free energy of solvation -10.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.950 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds