Wall clock time and date at job start Sun Mar 7 2021 09:31:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45200 * 109.46951 * 2 1 4 4 C 1.34225 * 116.99934 * 180.02562 * 3 2 1 5 5 O 1.20830 * 119.99979 * 359.97438 * 4 3 2 6 6 C 1.50702 * 120.00022 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.84694 * 311.18904 * 6 4 3 8 8 C 1.54047 * 113.69805 * 82.46331 * 6 4 3 9 9 C 1.53781 * 86.98475 * 139.99035 * 8 6 4 10 10 F 1.39903 * 113.61134 * 219.97883 * 9 8 6 11 11 C 1.52993 * 113.61636 * 89.16372 * 9 8 6 12 12 N 1.46506 * 109.47556 * 85.85942 * 11 9 8 13 13 C 1.34777 * 120.00264 * 179.97438 * 12 11 9 14 14 O 1.21691 * 119.99781 * 0.28326 * 13 12 11 15 15 C 1.46426 * 119.99830 * 179.97438 * 13 12 11 16 16 C 1.34807 * 119.99543 * 180.02562 * 15 13 12 17 17 C 1.47216 * 119.99573 * 180.02562 * 16 15 13 18 18 C 1.39828 * 120.16819 * 359.72831 * 17 16 15 19 19 C 1.37894 * 119.82293 * 179.76680 * 18 17 16 20 20 C 1.38406 * 120.17042 * 0.48402 * 19 18 17 21 21 C 1.50697 * 119.82522 * 179.74198 * 20 19 18 22 22 O 1.42909 * 109.46805 * 120.02696 * 21 20 19 23 23 Si 1.86300 * 109.47643 * 0.02791 * 21 20 19 24 24 C 1.38399 * 120.34303 * 359.77262 * 20 19 18 25 25 C 1.37889 * 120.17412 * 359.97438 * 24 20 19 26 26 C 1.53776 * 87.17483 * 334.57004 * 9 8 6 27 27 H 1.08998 * 109.47554 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.47203 * 299.99100 * 1 2 3 29 29 H 1.08997 * 109.47862 * 59.99187 * 1 2 3 30 30 H 1.09001 * 109.46711 * 240.00866 * 2 1 3 31 31 H 1.08997 * 109.47316 * 120.00280 * 2 1 3 32 32 H 1.09003 * 113.61237 * 25.48418 * 8 6 4 33 33 H 1.09002 * 113.69777 * 254.50621 * 8 6 4 34 34 H 1.09004 * 109.46862 * 325.86139 * 11 9 8 35 35 H 1.09000 * 109.47250 * 205.86162 * 11 9 8 36 36 H 0.96999 * 119.99689 * 0.02562 * 12 11 9 37 37 H 1.07999 * 120.00128 * 0.02562 * 15 13 12 38 38 H 1.07999 * 120.00329 * 0.02562 * 16 15 13 39 39 H 1.08001 * 120.09261 * 359.97438 * 18 17 16 40 40 H 1.08002 * 119.91778 * 180.23174 * 19 18 17 41 41 H 1.08996 * 109.47562 * 240.02166 * 21 20 19 42 42 H 0.96703 * 113.99853 * 299.99839 * 22 21 20 43 43 H 1.48501 * 109.99718 * 58.67732 * 23 21 20 44 44 H 1.48491 * 110.00127 * 179.97438 * 23 21 20 45 45 H 1.08006 * 119.91163 * 179.97438 * 24 20 19 46 46 H 1.07996 * 120.09053 * 179.97438 * 25 24 20 47 47 H 1.08999 * 113.61696 * 140.02205 * 26 9 8 48 48 H 1.09003 * 113.61590 * 270.84367 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5818 -0.7553 8 6 3.9870 3.5795 1.3988 9 6 5.3568 4.1435 0.9858 10 9 6.3113 4.1013 2.0078 11 6 5.2764 5.5107 0.3041 12 7 5.2666 6.5643 1.3220 13 6 5.2003 7.8585 0.9518 14 8 5.1435 8.1517 -0.2279 15 6 5.1899 8.9114 1.9693 16 6 5.1232 10.2059 1.5990 17 6 5.1133 11.2645 2.6219 18 6 5.1673 10.9311 3.9788 19 6 5.1626 11.9286 4.9308 20 6 5.0944 13.2565 4.5467 21 6 5.0838 14.3401 5.5939 22 8 6.2097 15.1990 5.4019 23 14 5.1729 13.5684 7.2872 24 6 5.0352 13.5943 3.2058 25 6 5.0444 12.6085 2.2417 26 6 5.4582 2.9682 -0.0007 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5137 0.8901 29 1 -0.3635 0.5139 -0.8898 30 1 1.8933 -0.5137 -0.8901 31 1 1.8934 -0.5139 0.8899 32 1 4.0402 2.8537 2.2102 33 1 3.2309 4.3469 1.5649 34 1 4.3627 5.5686 -0.2875 35 1 6.1401 5.6432 -0.3476 36 1 5.3085 6.3304 2.2625 37 1 5.2358 8.6510 3.0164 38 1 5.0769 10.4664 0.5519 39 1 5.2161 9.8952 4.2803 40 1 5.2081 11.6729 5.9792 41 1 4.1653 14.9205 5.5070 42 1 7.0632 14.7488 5.4658 43 1 6.4053 12.7486 7.4074 44 1 5.1638 14.6267 8.3287 45 1 4.9818 14.6327 2.9138 46 1 4.9978 12.8736 1.1958 47 1 5.8890 3.2423 -0.9636 48 1 5.9142 2.0760 0.4285 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:31:17 Heat of formation + Delta-G solvation = -130.903109 kcal Electronic energy + Delta-G solvation = -30814.270671 eV Core-core repulsion = 26137.593596 eV Total energy + Delta-G solvation = -4676.677075 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.156 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -48.81986 -41.90722 -40.93153 -40.45867 -39.40932 -37.91287 -37.61810 -35.59297 -35.07491 -32.70248 -32.21489 -31.41268 -29.63657 -27.37853 -27.12974 -26.29550 -24.16709 -23.94904 -23.54596 -22.25078 -21.96076 -20.82802 -20.01798 -19.20244 -18.87870 -18.22733 -18.06432 -17.71925 -17.40740 -16.85045 -16.74470 -16.58207 -16.37180 -16.19035 -15.94747 -15.91858 -15.50337 -15.29501 -15.09734 -14.80850 -14.69155 -14.48679 -14.36433 -14.12513 -13.95621 -13.78818 -13.65833 -13.52610 -13.26377 -13.03628 -12.99834 -12.67381 -12.53377 -12.44175 -12.27304 -12.20204 -12.09181 -11.61449 -11.58908 -11.51376 -11.43922 -11.34312 -11.12160 -10.61821 -10.25103 -9.96341 -9.23496 -4.91831 -0.54120 0.41306 0.89208 1.00193 1.31464 1.56266 1.60616 1.97295 2.01528 2.22838 2.82381 2.87554 3.06015 3.10110 3.24394 3.39544 3.46532 3.58058 3.70432 3.82029 3.83826 3.96067 3.96544 4.02694 4.15708 4.19806 4.23267 4.26201 4.30948 4.37766 4.46857 4.49010 4.56527 4.58833 4.65893 4.69331 4.77939 4.83540 4.86541 4.88925 4.99232 5.09016 5.10962 5.13182 5.16713 5.28042 5.40192 5.40293 5.49286 5.61782 5.91756 6.44320 6.46744 6.60265 7.14213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.473 3.527 5 O -0.538 6.538 6 C -0.105 4.105 7 H 0.160 0.840 8 C -0.127 4.127 9 C 0.090 3.910 10 F -0.201 7.201 11 C 0.119 3.881 12 N -0.714 5.714 13 C 0.547 3.453 14 O -0.586 6.586 15 C -0.210 4.210 16 C -0.018 4.018 17 C -0.082 4.082 18 C -0.095 4.095 19 C -0.122 4.122 20 C -0.110 4.110 21 C -0.087 4.087 22 O -0.549 6.549 23 Si 0.770 3.230 24 C -0.107 4.107 25 C -0.102 4.102 26 C -0.133 4.133 27 H 0.095 0.905 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.100 0.900 33 H 0.119 0.881 34 H 0.105 0.895 35 H 0.079 0.921 36 H 0.418 0.582 37 H 0.162 0.838 38 H 0.125 0.875 39 H 0.157 0.843 40 H 0.149 0.851 41 H 0.125 0.875 42 H 0.386 0.614 43 H -0.281 1.281 44 H -0.307 1.307 45 H 0.129 0.871 46 H 0.137 0.863 47 H 0.109 0.891 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.873 -1.712 3.065 6.006 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.274 6.274 4 C 0.318 3.682 5 O -0.428 6.428 6 C -0.124 4.124 7 H 0.177 0.823 8 C -0.165 4.165 9 C 0.072 3.928 10 F -0.182 7.182 11 C -0.006 4.006 12 N -0.366 5.366 13 C 0.337 3.663 14 O -0.468 6.468 15 C -0.230 4.230 16 C -0.038 4.038 17 C -0.082 4.082 18 C -0.112 4.112 19 C -0.139 4.139 20 C -0.110 4.110 21 C -0.196 4.196 22 O -0.358 6.358 23 Si 0.676 3.324 24 C -0.126 4.126 25 C -0.120 4.120 26 C -0.171 4.171 27 H 0.114 0.886 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.086 0.914 32 H 0.118 0.882 33 H 0.137 0.863 34 H 0.123 0.877 35 H 0.098 0.902 36 H 0.255 0.745 37 H 0.180 0.820 38 H 0.143 0.857 39 H 0.175 0.825 40 H 0.166 0.834 41 H 0.143 0.857 42 H 0.235 0.765 43 H -0.207 1.207 44 H -0.236 1.236 45 H 0.147 0.853 46 H 0.155 0.845 47 H 0.128 0.872 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.726 -1.499 2.925 5.756 hybrid contribution 1.429 -0.074 -0.241 1.451 sum -3.297 -1.573 2.684 4.533 Atomic orbital electron populations 1.21828 0.90654 1.04269 1.03813 1.23268 0.96951 0.79270 1.02519 1.86520 1.24052 1.33525 1.83322 1.23811 0.80627 0.92681 0.71115 1.90688 1.61212 1.44191 1.46660 1.22520 0.96735 0.90610 1.02495 0.82261 1.23659 0.96410 1.01174 0.95223 1.22426 0.87892 0.95499 0.87013 1.92869 1.66533 1.97412 1.61342 1.21673 1.04989 0.82960 0.90953 1.45616 1.74701 1.04969 1.11267 1.18652 0.75505 0.83448 0.88647 1.90830 1.52018 1.83523 1.20473 1.22970 1.07590 0.92177 1.00265 1.22371 0.90490 0.92083 0.98833 1.19130 1.02623 0.92967 0.93456 1.21658 0.97388 1.00977 0.91208 1.21181 1.00521 0.91850 1.00398 1.20541 1.00361 0.94908 0.95202 1.25312 0.92232 0.95049 1.06988 1.86581 1.17228 1.38272 1.93676 0.94086 0.86990 0.79396 0.71973 1.21072 0.99234 0.99978 0.92267 1.21615 0.97940 0.91905 1.00531 1.23619 0.93900 0.97978 1.01612 0.88623 0.91128 0.91225 0.91414 0.91352 0.88184 0.86297 0.87707 0.90230 0.74515 0.82027 0.85739 0.82540 0.83380 0.85737 0.76465 1.20705 1.23558 0.85330 0.84506 0.87220 0.88266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.69 10.29 71.98 0.74 1.43 16 2 C 0.05 -0.01 6.19 71.98 0.45 0.44 16 3 O -0.36 -0.62 10.22 -51.37 -0.53 -1.14 16 4 C 0.47 1.13 7.49 71.24 0.53 1.67 16 5 O -0.54 -4.97 15.65 21.95 0.34 -4.63 16 6 C -0.10 0.50 3.91 -10.92 -0.04 0.45 16 7 H 0.16 -1.53 7.69 -2.39 -0.02 -1.55 16 8 C -0.13 0.84 7.09 31.21 0.22 1.07 16 9 C 0.09 -0.42 1.88 -10.27 -0.02 -0.44 16 10 F -0.20 -0.01 16.67 44.97 0.75 0.74 16 11 C 0.12 -0.49 5.26 86.38 0.45 -0.03 16 12 N -0.71 2.56 5.45 -467.34 -2.55 0.01 16 13 C 0.55 0.99 7.74 86.37 0.67 1.66 16 14 O -0.59 -6.11 16.23 -4.32 -0.07 -6.18 16 15 C -0.21 0.59 9.41 23.62 0.22 0.82 16 16 C -0.02 0.01 9.46 23.84 0.23 0.24 16 17 C -0.08 0.11 5.87 -20.15 -0.12 0.00 16 18 C -0.09 0.42 9.41 22.57 0.21 0.63 16 19 C -0.12 0.52 8.65 22.23 0.19 0.71 16 20 C -0.11 0.19 5.40 -19.79 -0.11 0.09 16 21 C -0.09 0.17 2.82 71.23 0.20 0.37 16 22 O -0.55 -0.93 12.76 -148.98 -1.90 -2.84 16 23 Si 0.77 -2.78 29.77 68.60 2.04 -0.74 16 24 C -0.11 0.03 9.59 22.23 0.21 0.24 16 25 C -0.10 0.06 9.80 22.57 0.22 0.28 16 26 C -0.13 0.46 6.89 31.12 0.21 0.68 16 27 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 28 H 0.07 -0.34 8.14 -2.38 -0.02 -0.36 16 29 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 30 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 31 H 0.07 0.01 8.13 -2.39 -0.02 0.00 16 32 H 0.10 -0.50 8.10 -2.39 -0.02 -0.52 16 33 H 0.12 -1.22 8.10 -2.39 -0.02 -1.24 16 34 H 0.10 -0.62 7.37 -2.38 -0.02 -0.64 16 35 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.42 -3.33 8.06 -92.71 -0.75 -4.08 16 37 H 0.16 -1.57 6.07 -2.91 -0.02 -1.59 16 38 H 0.12 0.23 7.52 -2.91 -0.02 0.21 16 39 H 0.16 -1.58 6.17 -2.91 -0.02 -1.60 16 40 H 0.15 -1.25 4.85 -2.91 -0.01 -1.26 16 41 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 42 H 0.39 -1.46 8.70 -74.06 -0.64 -2.11 16 43 H -0.28 0.05 7.11 99.48 0.71 0.76 16 44 H -0.31 -1.50 7.11 99.48 0.71 -0.79 16 45 H 0.13 -0.08 8.06 -2.91 -0.02 -0.10 16 46 H 0.14 -0.37 8.06 -2.91 -0.02 -0.40 16 47 H 0.11 -0.66 8.10 -2.39 -0.02 -0.68 16 48 H 0.10 0.07 7.44 -2.39 -0.02 0.05 16 Total: 0.00 -24.24 409.20 2.23 -22.01 By element: Atomic # 1 Polarization: -17.19 SS G_CDS: -0.34 Total: -17.53 kcal Atomic # 6 Polarization: 5.82 SS G_CDS: 4.48 Total: 10.29 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.55 Total: 0.01 kcal Atomic # 8 Polarization: -12.64 SS G_CDS: -2.15 Total: -14.79 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.75 Total: 0.74 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.04 Total: -0.74 kcal Total: -24.24 2.23 -22.01 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.889 kcal (2) G-P(sol) polarization free energy of solvation -24.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.014 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.903 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds