Wall clock time and date at job start Sun Mar 7 2021 09:31:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45201 * 109.46712 * 2 1 4 4 C 1.34226 * 116.99888 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00302 * 0.02562 * 4 3 2 6 6 C 1.50705 * 120.00092 * 179.97438 * 4 3 2 7 7 H 1.08994 * 112.85018 * 311.19812 * 6 4 3 8 8 C 1.54055 * 113.69130 * 82.46699 * 6 4 3 9 9 C 1.53785 * 86.98428 * 139.98925 * 8 6 4 10 10 F 1.39898 * 113.61748 * 219.98369 * 9 8 6 11 11 C 1.53002 * 113.61426 * 89.15717 * 9 8 6 12 12 N 1.46507 * 109.46696 * 85.86387 * 11 9 8 13 13 C 1.34780 * 119.99889 * 180.02562 * 12 11 9 14 14 O 1.21627 * 119.99715 * 0.02562 * 13 12 11 15 15 C 1.47292 * 119.99860 * 180.02562 * 13 12 11 16 16 C 1.40365 * 120.04214 * 180.02562 * 15 13 12 17 17 O 1.35679 * 120.14223 * 359.97438 * 16 15 13 18 18 C 1.38319 * 119.72132 * 180.02562 * 16 15 13 19 19 C 1.39560 * 119.81602 * 0.02562 * 18 16 15 20 20 C 1.47568 * 119.95817 * 179.97438 * 19 18 16 21 21 C 1.36109 * 125.94735 * 179.97438 * 20 19 18 22 22 C 1.40795 * 106.73337 * 180.22729 * 21 20 19 23 23 C 1.34832 * 107.04954 * 359.62775 * 22 21 20 24 24 C 1.50703 * 125.65064 * 180.13041 * 23 22 21 25 25 O 1.42901 * 109.47038 * 65.26126 * 24 23 22 26 26 Si 1.86304 * 109.47232 * 185.25576 * 24 23 22 27 27 O 1.34226 * 108.69752 * 0.37982 * 23 22 21 28 28 C 1.39960 * 120.08988 * 0.24713 * 19 18 16 29 29 C 1.36390 * 120.27667 * 359.48943 * 28 19 18 30 30 C 1.53781 * 113.61403 * 180.02562 * 6 4 3 31 31 H 1.09000 * 109.47636 * 299.99904 * 1 2 3 32 32 H 1.09006 * 109.47183 * 60.00512 * 1 2 3 33 33 H 1.09001 * 109.46969 * 179.97438 * 1 2 3 34 34 H 1.08997 * 109.47141 * 240.00064 * 2 1 3 35 35 H 1.08995 * 109.46801 * 119.99217 * 2 1 3 36 36 H 1.09005 * 113.61517 * 25.49086 * 8 6 4 37 37 H 1.08995 * 113.69480 * 254.50608 * 8 6 4 38 38 H 1.09001 * 109.47286 * 325.86787 * 11 9 8 39 39 H 1.08998 * 109.47568 * 205.86114 * 11 9 8 40 40 H 0.96996 * 120.00061 * 0.02562 * 12 11 9 41 41 H 0.96701 * 113.99590 * 270.02696 * 17 16 15 42 42 H 1.08002 * 120.09391 * 180.02562 * 18 16 15 43 43 H 1.08002 * 126.62860 * 359.95803 * 21 20 19 44 44 H 1.08005 * 126.47533 * 179.75634 * 22 21 20 45 45 H 1.08997 * 109.47516 * 305.25880 * 24 23 22 46 46 H 0.96706 * 114.00024 * 59.99766 * 25 24 23 47 47 H 1.48504 * 109.99670 * 58.68431 * 26 24 23 48 48 H 1.48491 * 110.00131 * 180.02562 * 26 24 23 49 49 H 1.08004 * 119.86487 * 179.74666 * 28 19 18 50 50 H 1.08004 * 119.90723 * 180.23061 * 29 28 19 51 51 H 1.08994 * 113.61294 * 105.38917 * 30 6 4 52 52 H 1.09004 * 113.68791 * 334.49391 * 30 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9376 0.0000 7 1 3.4714 3.5811 -0.7564 8 6 3.9856 3.5811 1.3982 9 6 5.3558 4.1447 0.9859 10 9 6.3094 4.1036 2.0087 11 6 5.2760 5.5112 0.3025 12 7 5.2652 6.5659 1.3194 13 6 5.1982 7.8597 0.9477 14 8 5.1462 8.1516 -0.2318 15 6 5.1879 8.9200 1.9701 16 6 5.1176 10.2676 1.5841 17 8 5.0594 10.5976 0.2693 18 6 5.1089 11.2580 2.5496 19 6 5.1706 10.9111 3.9000 20 6 5.1621 11.9651 4.9328 21 6 5.2169 11.7660 6.2781 22 6 5.1789 13.0391 6.8782 23 6 5.1120 13.9443 5.8811 24 6 5.0553 15.4402 6.0551 25 8 6.2786 15.8991 6.6338 26 14 4.8116 16.2497 4.3949 27 8 5.0987 13.2921 4.7080 28 6 5.2463 9.5650 4.2760 29 6 5.2497 8.5852 3.3272 30 6 5.4581 2.9683 0.0001 31 1 -0.3634 0.5138 0.8900 32 1 -0.3634 0.5138 -0.8901 33 1 -0.3633 -1.0277 -0.0005 34 1 1.8934 -0.5138 -0.8900 35 1 1.8933 -0.5137 0.8900 36 1 4.0382 2.8562 2.2105 37 1 3.2294 4.3486 1.5627 38 1 4.3628 5.5684 -0.2899 39 1 6.1403 5.6430 -0.3485 40 1 5.3063 6.3330 2.2601 41 1 5.9247 10.7304 -0.1415 42 1 5.0545 12.2969 2.2594 43 1 5.2737 10.8151 6.7870 44 1 5.2015 13.2508 7.9371 45 1 4.2238 15.6985 6.7108 46 1 7.0628 15.7031 6.1028 47 1 3.5586 15.7567 3.7686 48 1 4.7546 17.7251 4.5528 49 1 5.2980 9.3009 5.3219 50 1 5.3045 7.5483 3.6241 51 1 5.8894 3.2416 -0.9629 52 1 5.9139 2.0765 0.4303 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_12807986.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:31:43 Heat of formation + Delta-G solvation = -163.941900 kcal Electronic energy + Delta-G solvation = -39073.706061 eV Core-core repulsion = 33501.779651 eV Total energy + Delta-G solvation = -5571.926410 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.155 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -48.81734 -43.73902 -41.91925 -41.53253 -39.93821 -39.23356 -38.08640 -37.81704 -37.60706 -35.59593 -34.24372 -33.45961 -32.69792 -31.33536 -30.68577 -29.39941 -27.27842 -27.11200 -26.28402 -24.36441 -24.05970 -23.85772 -22.44074 -22.23773 -21.95271 -21.32158 -20.48965 -19.70336 -19.21294 -18.81206 -18.50802 -18.06074 -17.74169 -17.69132 -17.45142 -17.29345 -16.76755 -16.70800 -16.47732 -16.26963 -16.17276 -15.95125 -15.73807 -15.60794 -15.33661 -15.25007 -14.79717 -14.63952 -14.39586 -14.35537 -14.26449 -13.98741 -13.93989 -13.86751 -13.67760 -13.59439 -13.57175 -13.41300 -13.00282 -12.82041 -12.70838 -12.67485 -12.53003 -12.44122 -12.25933 -12.20445 -11.89413 -11.59332 -11.50604 -11.43798 -11.12884 -10.97096 -10.73199 -10.58343 -10.24343 -9.93937 -9.01238 -5.05158 -0.79036 0.16117 0.64488 1.00214 1.13708 1.39921 1.45956 1.56315 1.74997 1.87536 1.89802 1.91684 2.64807 2.87074 3.02669 3.04715 3.09199 3.24411 3.29683 3.41951 3.47150 3.62295 3.67920 3.83690 3.88049 3.95522 3.99036 4.01396 4.02008 4.16877 4.22440 4.26202 4.30393 4.31774 4.41155 4.48219 4.55756 4.64698 4.66221 4.68626 4.71231 4.78062 4.80411 4.82895 4.87993 4.89475 5.06995 5.09094 5.10743 5.12750 5.22257 5.22666 5.39979 5.42675 5.54089 5.96953 6.36346 6.60210 6.60418 6.73400 7.08885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.054 3.946 3 O -0.358 6.358 4 C 0.473 3.527 5 O -0.537 6.537 6 C -0.106 4.106 7 H 0.159 0.841 8 C -0.129 4.129 9 C 0.091 3.909 10 F -0.200 7.200 11 C 0.120 3.880 12 N -0.715 5.715 13 C 0.561 3.439 14 O -0.556 6.556 15 C -0.179 4.179 16 C 0.164 3.836 17 O -0.494 6.494 18 C -0.152 4.152 19 C 0.026 3.974 20 C 0.006 3.994 21 C -0.173 4.173 22 C -0.184 4.184 23 C -0.053 4.053 24 C -0.024 4.024 25 O -0.540 6.540 26 Si 0.770 3.230 27 O -0.173 6.173 28 C -0.111 4.111 29 C -0.052 4.052 30 C -0.131 4.131 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.095 0.905 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.101 0.899 37 H 0.117 0.883 38 H 0.104 0.896 39 H 0.084 0.916 40 H 0.414 0.586 41 H 0.410 0.590 42 H 0.141 0.859 43 H 0.181 0.819 44 H 0.165 0.835 45 H 0.138 0.862 46 H 0.399 0.601 47 H -0.297 1.297 48 H -0.277 1.277 49 H 0.167 0.833 50 H 0.167 0.833 51 H 0.111 0.889 52 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.267 -1.581 3.251 3.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.318 3.682 5 O -0.427 6.427 6 C -0.125 4.125 7 H 0.176 0.824 8 C -0.166 4.166 9 C 0.072 3.928 10 F -0.180 7.180 11 C -0.004 4.004 12 N -0.369 5.369 13 C 0.349 3.651 14 O -0.435 6.435 15 C -0.183 4.183 16 C 0.118 3.882 17 O -0.307 6.307 18 C -0.170 4.170 19 C 0.025 3.975 20 C -0.043 4.043 21 C -0.192 4.192 22 C -0.203 4.203 23 C -0.103 4.103 24 C -0.135 4.135 25 O -0.348 6.348 26 Si 0.675 3.325 27 O -0.071 6.071 28 C -0.129 4.129 29 C -0.071 4.071 30 C -0.169 4.169 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.114 0.886 34 H 0.086 0.914 35 H 0.087 0.913 36 H 0.119 0.881 37 H 0.135 0.865 38 H 0.122 0.878 39 H 0.103 0.897 40 H 0.252 0.748 41 H 0.270 0.730 42 H 0.159 0.841 43 H 0.198 0.802 44 H 0.182 0.818 45 H 0.155 0.845 46 H 0.250 0.750 47 H -0.224 1.224 48 H -0.203 1.203 49 H 0.184 0.816 50 H 0.185 0.815 51 H 0.129 0.871 52 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.065 -0.904 2.179 2.588 hybrid contribution 0.323 -0.656 0.817 1.097 sum -0.742 -1.561 2.996 3.459 Atomic orbital electron populations 1.21831 0.90730 1.04260 1.03769 1.23263 0.96897 0.79276 1.02542 1.86522 1.24114 1.33524 1.83334 1.23812 0.80608 0.92694 0.71132 1.90686 1.61174 1.44172 1.46628 1.22525 0.96886 0.90587 1.02459 0.82370 1.23674 0.96469 1.01181 0.95320 1.22419 0.87855 0.95446 0.87043 1.92869 1.66504 1.97408 1.61210 1.21697 1.05180 0.82709 0.90811 1.45621 1.75224 1.04767 1.11287 1.18122 0.76111 0.82779 0.88057 1.90838 1.50282 1.83114 1.19298 1.20473 1.10013 0.92996 0.94798 1.18444 0.95018 0.90256 0.84489 1.84728 1.35556 1.90928 1.19502 1.21594 1.03231 1.00424 0.91758 1.17935 0.98534 0.91161 0.89831 1.20578 1.08704 0.80778 0.94289 1.22237 1.04779 1.00400 0.91804 1.21831 1.05664 0.91746 1.01085 1.23223 1.07717 0.96495 0.82847 1.24418 0.91522 0.86770 1.10787 1.86535 1.16244 1.80194 1.51865 0.93363 0.85813 0.76809 0.76522 1.83921 1.71608 1.18225 1.33339 1.21030 1.00373 0.89388 1.02071 1.21136 0.94815 1.01427 0.89699 1.23620 0.93744 0.97931 1.01643 0.91177 0.91273 0.88609 0.91379 0.91320 0.88059 0.86504 0.87816 0.89741 0.74777 0.72970 0.84069 0.80199 0.81753 0.84507 0.74979 1.22418 1.20340 0.81556 0.81550 0.87099 0.88160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.65 10.29 71.98 0.74 1.39 16 2 C 0.05 0.00 6.19 71.98 0.45 0.44 16 3 O -0.36 -0.68 10.22 -51.38 -0.53 -1.20 16 4 C 0.47 1.11 7.49 71.24 0.53 1.64 16 5 O -0.54 -4.84 15.65 21.96 0.34 -4.50 16 6 C -0.11 0.51 3.91 -10.92 -0.04 0.47 16 7 H 0.16 -1.50 7.69 -2.39 -0.02 -1.51 16 8 C -0.13 0.87 7.09 31.22 0.22 1.10 16 9 C 0.09 -0.47 1.88 -10.25 -0.02 -0.49 16 10 F -0.20 0.21 16.67 44.97 0.75 0.96 16 11 C 0.12 -0.54 5.26 86.38 0.45 -0.09 16 12 N -0.71 2.42 5.40 -466.47 -2.52 -0.10 16 13 C 0.56 1.72 7.75 86.62 0.67 2.39 16 14 O -0.56 -5.91 15.14 16.88 0.26 -5.66 16 15 C -0.18 -0.15 5.89 -19.97 -0.12 -0.27 16 16 C 0.16 0.57 6.71 22.81 0.15 0.72 16 17 O -0.49 -2.72 11.56 -68.97 -0.80 -3.52 16 18 C -0.15 -0.28 9.65 22.61 0.22 -0.06 16 19 C 0.03 -0.01 5.87 -20.08 -0.12 -0.13 16 20 C 0.01 0.01 7.02 24.24 0.17 0.18 16 21 C -0.17 0.29 10.26 22.40 0.23 0.52 16 22 C -0.18 0.05 10.78 22.11 0.24 0.29 16 23 C -0.05 -0.03 6.21 24.90 0.15 0.12 16 24 C -0.02 0.04 2.98 71.24 0.21 0.25 16 25 O -0.54 1.11 12.88 -148.98 -1.92 -0.81 16 26 Si 0.77 -0.90 32.11 68.60 2.20 1.30 16 27 O -0.17 -0.42 8.79 -6.02 -0.05 -0.47 16 28 C -0.11 0.58 9.48 22.26 0.21 0.79 16 29 C -0.05 0.29 9.47 22.24 0.21 0.50 16 30 C -0.13 0.53 6.89 31.14 0.21 0.74 16 31 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 32 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 33 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 34 H 0.07 0.04 8.13 -2.39 -0.02 0.02 16 35 H 0.07 0.02 8.13 -2.39 -0.02 0.00 16 36 H 0.10 -0.54 8.10 -2.38 -0.02 -0.56 16 37 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 38 H 0.10 -0.61 7.37 -2.39 -0.02 -0.63 16 39 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 40 H 0.41 -3.27 6.08 -92.71 -0.56 -3.83 16 41 H 0.41 -0.74 9.06 -74.06 -0.67 -1.41 16 42 H 0.14 0.19 7.90 -2.91 -0.02 0.17 16 43 H 0.18 -1.37 7.24 -2.91 -0.02 -1.39 16 44 H 0.16 -0.45 8.06 -2.91 -0.02 -0.48 16 45 H 0.14 -0.35 7.96 -2.39 -0.02 -0.37 16 46 H 0.40 -3.85 8.70 -74.05 -0.64 -4.49 16 47 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 48 H -0.28 -1.10 7.11 99.48 0.71 -0.39 16 49 H 0.17 -1.84 6.95 -2.91 -0.02 -1.86 16 50 H 0.17 -2.03 6.38 -2.91 -0.02 -2.05 16 51 H 0.11 -0.74 8.10 -2.39 -0.02 -0.76 16 52 H 0.10 0.00 7.44 -2.38 -0.02 -0.01 16 Total: 0.00 -28.70 447.68 1.70 -27.00 By element: Atomic # 1 Polarization: -22.70 SS G_CDS: -0.82 Total: -23.52 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: 4.78 Total: 10.51 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -2.52 Total: -0.10 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: -2.69 Total: -16.16 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.75 Total: 0.96 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.20 Total: 1.30 kcal Total: -28.70 1.70 -27.00 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_12807986.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.938 kcal (2) G-P(sol) polarization free energy of solvation -28.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds