Wall clock time and date at job start Sun Mar 7 2021 09:32:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45198 * 109.47632 * 2 1 4 4 C 1.34227 * 117.00195 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99971 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99987 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84908 * 311.19868 * 6 4 3 8 8 C 1.54054 * 113.61705 * 82.50585 * 6 4 3 9 9 C 1.53781 * 86.98176 * 139.97829 * 8 6 4 10 10 F 1.39903 * 113.61412 * 219.97889 * 9 8 6 11 11 C 1.52999 * 113.61599 * 89.16317 * 9 8 6 12 12 N 1.46495 * 109.47451 * 85.85815 * 11 9 8 13 13 C 1.34775 * 120.00141 * 180.02562 * 12 11 9 14 14 O 1.21572 * 120.00082 * 0.02562 * 13 12 11 15 15 C 1.47659 * 119.99802 * 180.02562 * 13 12 11 16 16 C 1.40163 * 119.97384 * 359.72119 * 15 13 12 17 17 C 1.36361 * 120.66827 * 180.29924 * 16 15 13 18 18 C 1.39326 * 120.23620 * 359.95730 * 17 16 15 19 19 N 1.37398 * 133.24870 * 180.02562 * 18 17 16 20 20 C 1.36874 * 109.97801 * 180.02562 * 19 18 17 21 21 C 1.34186 * 109.96924 * 359.97438 * 20 19 18 22 22 C 1.50699 * 126.54274 * 180.02562 * 21 20 19 23 23 O 1.42895 * 109.47257 * 254.97558 * 22 21 20 24 24 Si 1.86305 * 109.46829 * 14.97584 * 22 21 20 25 25 C 1.40911 * 119.64019 * 0.04757 * 18 17 16 26 26 C 1.39195 * 119.97252 * 180.02562 * 15 13 12 27 27 C 1.53780 * 113.61264 * 180.02562 * 6 4 3 28 28 H 1.09007 * 109.46808 * 300.00134 * 1 2 3 29 29 H 1.08998 * 109.46944 * 59.99369 * 1 2 3 30 30 H 1.08997 * 109.47577 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.46991 * 239.99739 * 2 1 3 32 32 H 1.09004 * 109.46837 * 120.00225 * 2 1 3 33 33 H 1.08999 * 113.61075 * 25.47965 * 8 6 4 34 34 H 1.08998 * 113.69283 * 254.49462 * 8 6 4 35 35 H 1.09008 * 109.46772 * 325.85990 * 11 9 8 36 36 H 1.08995 * 109.47570 * 205.86427 * 11 9 8 37 37 H 0.97002 * 120.00241 * 0.02562 * 12 11 9 38 38 H 1.08004 * 119.66931 * 0.26093 * 16 15 13 39 39 H 1.08000 * 119.87724 * 179.97438 * 17 16 15 40 40 H 0.96993 * 125.01571 * 359.95506 * 19 18 17 41 41 H 1.08003 * 125.01496 * 180.02562 * 20 19 18 42 42 H 1.09001 * 109.47063 * 134.97657 * 22 21 20 43 43 H 0.96700 * 114.00288 * 179.97438 * 23 22 21 44 44 H 1.48487 * 110.00112 * 300.00030 * 24 22 21 45 45 H 1.48498 * 109.99677 * 61.32017 * 24 22 21 46 46 H 1.07994 * 120.29940 * 359.74196 * 26 15 13 47 47 H 1.08997 * 113.61339 * 105.47464 * 27 6 4 48 48 H 1.08995 * 113.69416 * 334.57778 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9209 2.9373 0.0000 7 1 3.4717 3.5808 -0.7564 8 6 3.9860 3.5788 1.3991 9 6 5.3562 4.1428 0.9875 10 9 6.3099 4.1002 2.0103 11 6 5.2765 5.5104 0.3062 12 7 5.2659 6.5635 1.3244 13 6 5.1990 7.8578 0.9546 14 8 5.1470 8.1514 -0.2240 15 6 5.1889 8.9193 1.9811 16 6 5.2429 8.5799 3.3399 17 6 5.2283 9.5484 4.2998 18 6 5.1599 10.8925 3.9393 19 7 5.1304 12.0606 4.6621 20 6 5.0592 13.1331 3.8147 21 6 5.0410 12.7106 2.5412 22 6 4.9683 13.5760 1.3096 23 8 3.6525 13.5079 0.7565 24 14 5.3597 15.3394 1.7658 25 6 5.1050 11.2466 2.5765 26 6 5.1193 10.2558 1.5986 27 6 5.4584 2.9678 0.0001 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5139 0.8900 33 1 4.0386 2.8527 2.2103 34 1 3.2298 4.3461 1.5647 35 1 4.3633 5.5685 -0.2862 36 1 6.1407 5.6430 -0.3447 37 1 5.3070 6.3293 2.2649 38 1 5.2961 7.5409 3.6298 39 1 5.2700 9.2724 5.3431 40 1 5.1551 12.1170 5.6300 41 1 5.0238 14.1670 4.1251 42 1 5.6905 13.2222 0.5738 43 1 3.5326 14.0424 -0.0404 44 1 4.3823 15.8335 2.7684 45 1 6.7374 15.4286 2.3127 46 1 5.0767 10.5217 0.5527 47 1 5.8897 3.2425 -0.9625 48 1 5.9142 2.0755 0.4289 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:32:15 Heat of formation + Delta-G solvation = -110.180711 kcal Electronic energy + Delta-G solvation = -33459.771670 eV Core-core repulsion = 28590.341134 eV Total energy + Delta-G solvation = -4869.430536 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.152 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -48.82721 -42.50553 -41.84179 -40.72485 -39.46074 -37.85777 -37.51306 -37.38630 -35.53491 -33.39298 -32.75694 -31.24738 -30.67529 -29.24950 -27.30114 -26.68644 -26.42651 -24.46776 -23.88145 -23.51951 -22.21636 -21.52651 -20.72980 -20.27205 -19.21513 -19.10825 -18.54851 -18.30485 -17.98473 -17.67559 -17.49916 -16.99807 -16.75029 -16.48693 -16.08065 -15.95873 -15.66526 -15.54186 -15.32002 -15.14214 -15.03082 -14.78431 -14.77805 -14.68668 -14.33839 -14.17102 -13.97177 -13.82712 -13.72547 -13.62691 -13.48872 -13.02520 -12.76976 -12.70002 -12.61442 -12.52823 -12.51180 -12.20261 -12.02093 -11.86594 -11.61419 -11.55527 -11.37560 -10.92182 -10.80902 -10.20266 -10.19418 -9.35266 -8.85941 -5.02824 -0.07890 0.16485 1.09000 1.28130 1.40609 1.55493 1.65077 1.92137 1.93984 1.95427 1.98843 2.77164 2.93582 2.96704 3.02066 3.14207 3.39243 3.52204 3.57043 3.66058 3.77493 3.80908 3.92314 3.93812 3.96863 4.02151 4.11140 4.15963 4.23997 4.26339 4.34390 4.36984 4.44951 4.46008 4.49146 4.56622 4.59931 4.65518 4.71275 4.77268 4.77757 4.98538 5.00110 5.01225 5.23357 5.27048 5.34534 5.41875 5.48888 5.56775 5.94850 6.32362 6.43878 6.68914 6.73454 7.23128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.136 4.136 9 C 0.083 3.917 10 F -0.189 7.189 11 C 0.120 3.880 12 N -0.728 5.728 13 C 0.569 3.431 14 O -0.535 6.535 15 C -0.169 4.169 16 C -0.065 4.065 17 C -0.133 4.133 18 C 0.120 3.880 19 N -0.584 5.584 20 C 0.056 3.944 21 C -0.144 4.144 22 C -0.038 4.038 23 O -0.546 6.546 24 Si 0.687 3.313 25 C -0.102 4.102 26 C 0.011 3.989 27 C -0.129 4.129 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.082 0.918 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.105 0.895 34 H 0.099 0.901 35 H 0.094 0.906 36 H 0.089 0.911 37 H 0.404 0.596 38 H 0.129 0.871 39 H 0.129 0.871 40 H 0.422 0.578 41 H 0.170 0.830 42 H 0.073 0.927 43 H 0.380 0.620 44 H -0.253 1.253 45 H -0.256 1.256 46 H 0.140 0.860 47 H 0.098 0.902 48 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.879 2.672 1.786 3.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.317 3.683 5 O -0.389 6.389 6 C -0.128 4.128 7 H 0.154 0.846 8 C -0.174 4.174 9 C 0.064 3.936 10 F -0.169 7.169 11 C -0.004 4.004 12 N -0.382 5.382 13 C 0.358 3.642 14 O -0.413 6.413 15 C -0.174 4.174 16 C -0.085 4.085 17 C -0.153 4.153 18 C 0.012 3.988 19 N -0.186 5.186 20 C -0.071 4.071 21 C -0.151 4.151 22 C -0.150 4.150 23 O -0.352 6.352 24 Si 0.588 3.412 25 C -0.106 4.106 26 C -0.008 4.008 27 C -0.167 4.167 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.101 0.899 31 H 0.090 0.910 32 H 0.089 0.911 33 H 0.123 0.877 34 H 0.118 0.882 35 H 0.112 0.888 36 H 0.107 0.893 37 H 0.240 0.760 38 H 0.147 0.853 39 H 0.147 0.853 40 H 0.260 0.740 41 H 0.187 0.813 42 H 0.091 0.909 43 H 0.228 0.772 44 H -0.178 1.178 45 H -0.180 1.180 46 H 0.158 0.842 47 H 0.117 0.883 48 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -1.562 2.749 2.245 3.878 hybrid contribution 0.143 -0.898 1.232 1.531 sum -1.419 1.851 3.478 4.187 Atomic orbital electron populations 1.21825 0.92239 1.03318 1.03717 1.23111 0.95677 0.79677 1.02827 1.86511 1.24116 1.32912 1.83617 1.23219 0.80819 0.91916 0.72355 1.90701 1.60536 1.42763 1.44872 1.22378 0.97219 0.92011 1.01213 0.84634 1.23684 0.96659 1.01100 0.95964 1.22485 0.87767 0.95881 0.87431 1.92889 1.65952 1.97374 1.60711 1.21635 1.04804 0.83034 0.90975 1.45684 1.76541 1.05472 1.10467 1.18120 0.75672 0.82022 0.88395 1.90801 1.49575 1.82645 1.18260 1.19470 1.11665 0.93263 0.92965 1.20603 0.97630 0.98959 0.91303 1.19667 1.06856 0.88634 1.00153 1.18444 1.01579 0.87812 0.91002 1.41692 1.63944 1.03973 1.09031 1.21586 1.03818 0.92221 0.89427 1.19639 1.11248 0.91484 0.92712 1.23996 0.88134 1.08115 0.94722 1.86532 1.28708 1.73065 1.46894 0.94985 0.79856 0.78596 0.87773 1.18892 1.07267 0.92574 0.91897 1.20660 0.90928 0.89675 0.99532 1.23625 0.93491 0.98554 1.01000 0.91350 0.91296 0.89948 0.90986 0.91054 0.87665 0.88204 0.88783 0.89328 0.75951 0.85286 0.85307 0.74046 0.81316 0.90943 0.77237 1.17789 1.18019 0.84233 0.88330 0.86496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.66 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.44 10.22 -39.25 -0.40 -0.85 16 4 C 0.47 0.68 7.49 36.01 0.27 0.95 16 5 O -0.50 -2.19 15.65 -18.75 -0.29 -2.48 16 6 C -0.11 0.17 3.91 -90.81 -0.36 -0.18 16 7 H 0.14 -0.47 7.70 -51.93 -0.40 -0.87 16 8 C -0.14 0.30 7.09 -25.77 -0.18 0.12 16 9 C 0.08 -0.11 1.88 -89.79 -0.17 -0.28 16 10 F -0.19 -0.15 16.67 2.25 0.04 -0.11 16 11 C 0.12 -0.10 5.26 -4.04 -0.02 -0.12 16 12 N -0.73 -0.10 5.40 -61.31 -0.33 -0.43 16 13 C 0.57 1.77 7.76 -12.41 -0.10 1.68 16 14 O -0.54 -3.45 16.33 5.30 0.09 -3.37 16 15 C -0.17 -0.43 5.87 -104.97 -0.62 -1.04 16 16 C -0.07 -0.02 9.46 -39.54 -0.37 -0.39 16 17 C -0.13 -0.03 10.00 -39.85 -0.40 -0.43 16 18 C 0.12 0.22 7.27 -83.95 -0.61 -0.39 16 19 N -0.58 -0.01 6.05 -10.61 -0.06 -0.07 16 20 C 0.06 0.06 10.43 -16.73 -0.17 -0.11 16 21 C -0.14 -0.38 5.61 -102.69 -0.58 -0.96 16 22 C -0.04 -0.02 3.05 36.01 0.11 0.09 16 23 O -0.55 -0.57 12.86 -35.23 -0.45 -1.02 16 24 Si 0.69 -1.00 30.79 -169.99 -5.23 -6.24 16 25 C -0.10 -0.36 6.34 -105.16 -0.67 -1.02 16 26 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 27 C -0.13 0.17 6.89 -25.90 -0.18 -0.01 16 28 H 0.07 -0.12 8.14 -51.92 -0.42 -0.54 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 32 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 33 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 34 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 35 H 0.09 -0.15 7.37 -51.92 -0.38 -0.53 16 36 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.40 -0.67 6.08 -40.82 -0.25 -0.91 16 38 H 0.13 -0.33 6.36 -52.48 -0.33 -0.67 16 39 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 40 H 0.42 -1.37 8.96 -40.82 -0.37 -1.73 16 41 H 0.17 -0.15 6.30 -52.48 -0.33 -0.48 16 42 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 43 H 0.38 -1.54 8.74 45.56 0.40 -1.14 16 44 H -0.25 -0.24 7.04 56.52 0.40 0.16 16 45 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 46 H 0.14 0.57 7.64 -52.49 -0.40 0.17 16 47 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 48 H 0.12 0.02 7.44 -51.93 -0.39 -0.37 16 LS Contribution 408.32 15.07 6.15 6.15 Total: 0.00 -11.84 408.32 -10.59 -22.43 By element: Atomic # 1 Polarization: -6.18 SS G_CDS: -6.29 Total: -12.47 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -3.80 Total: -1.55 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.40 Total: -0.50 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -1.06 Total: -7.71 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.04 Total: -0.11 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.23 Total: -6.24 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -11.84 -10.59 -22.43 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.753 kcal (2) G-P(sol) polarization free energy of solvation -11.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds