Wall clock time and date at job start Sun Mar 7 2021 09:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45192 * 109.47043 * 2 1 4 4 C 1.34229 * 117.00207 * 179.97438 * 3 2 1 5 5 O 1.20821 * 119.99821 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99926 * 179.97438 * 4 3 2 7 7 H 1.08994 * 112.91064 * 48.75165 * 6 4 3 8 8 C 1.53787 * 113.61150 * 180.02562 * 6 4 3 9 9 C 1.53779 * 87.07963 * 139.98062 * 8 6 4 10 10 F 1.39904 * 113.61465 * 220.01404 * 9 8 6 11 11 C 1.53000 * 113.61424 * 89.20141 * 9 8 6 12 12 N 1.46503 * 109.47079 * 180.02562 * 11 9 8 13 13 C 1.34780 * 119.99932 * 180.02562 * 12 11 9 14 14 O 1.21625 * 119.99640 * 359.97438 * 13 12 11 15 15 C 1.47264 * 119.99956 * 179.97438 * 13 12 11 16 16 C 1.36770 * 126.93721 * 0.02562 * 15 13 12 17 17 N 1.34661 * 108.39130 * 179.97438 * 16 15 13 18 18 C 1.46507 * 124.85180 * 180.02562 * 17 16 15 19 19 C 1.36444 * 110.30234 * 359.97438 * 17 16 15 20 20 C 1.50696 * 125.57492 * 180.02562 * 19 17 16 21 21 O 1.42898 * 109.47247 * 330.00232 * 20 19 17 22 22 Si 1.86303 * 109.47199 * 209.99864 * 20 19 17 23 23 C 1.34491 * 108.85343 * 359.75337 * 19 17 16 24 24 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 25 25 H 1.09000 * 109.47423 * 299.99782 * 1 2 3 26 26 H 1.08996 * 109.47324 * 60.00548 * 1 2 3 27 27 H 1.09008 * 109.46622 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46889 * 239.99436 * 2 1 3 29 29 H 1.09002 * 109.46652 * 119.99417 * 2 1 3 30 30 H 1.08997 * 113.61028 * 254.53022 * 8 6 4 31 31 H 1.09000 * 113.61529 * 25.43161 * 8 6 4 32 32 H 1.09006 * 109.47043 * 299.99654 * 11 9 8 33 33 H 1.09002 * 109.47439 * 59.99700 * 11 9 8 34 34 H 0.96999 * 119.99954 * 359.97438 * 12 11 9 35 35 H 1.07993 * 125.80713 * 359.97438 * 16 15 13 36 36 H 1.08995 * 109.47300 * 89.96903 * 18 17 16 37 37 H 1.08994 * 109.47382 * 209.97545 * 18 17 16 38 38 H 1.09003 * 109.46612 * 329.97282 * 18 17 16 39 39 H 1.09000 * 109.47222 * 90.00468 * 20 19 17 40 40 H 0.96704 * 113.99584 * 299.99755 * 21 20 19 41 41 H 1.48497 * 109.99975 * 179.97438 * 22 20 19 42 42 H 1.48500 * 110.00448 * 301.32196 * 22 20 19 43 43 H 1.08000 * 126.83584 * 180.25894 * 23 19 17 44 44 H 1.09002 * 113.61557 * 270.88569 * 24 9 8 45 45 H 1.09004 * 113.61501 * 139.97990 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5830 0.7542 8 6 5.4582 2.9682 0.0001 9 6 5.3564 4.1421 -0.9880 10 9 6.3095 4.0976 -2.0112 11 6 5.2783 5.5105 -0.3081 12 7 5.1839 6.5579 -1.3280 13 6 5.1044 7.8520 -0.9597 14 8 5.1105 8.1500 0.2195 15 6 5.0100 8.9049 -1.9849 16 6 4.9908 8.7318 -3.3415 17 7 4.8953 9.9426 -3.9230 18 6 4.8460 10.1756 -5.3686 19 6 4.8498 10.9215 -2.9736 20 6 4.7425 12.4002 -3.2434 21 8 5.3687 12.7034 -4.4915 22 14 5.5893 13.3437 -1.8783 23 6 4.9105 10.3505 -1.7574 24 6 3.9863 3.5764 -1.3973 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3633 -1.0278 0.0005 28 1 1.8933 -0.5139 -0.8899 29 1 1.8933 -0.5138 0.8901 30 1 5.8893 3.2436 0.9625 31 1 5.9128 2.0749 -0.4284 32 1 4.3976 5.5478 0.3332 33 1 6.1731 5.6687 0.2940 34 1 5.1793 6.3201 -2.2684 35 1 5.0434 7.7851 -3.8584 36 1 3.8089 10.1634 -5.7034 37 1 5.2898 11.1448 -5.5958 38 1 5.4028 9.3917 -5.8820 39 1 3.6916 12.6866 -3.2851 40 1 6.3076 12.4744 -4.5263 41 1 5.4910 14.8034 -2.1330 42 1 4.9679 13.0128 -0.5708 43 1 4.8920 10.8560 -0.8031 44 1 4.0385 2.8494 -2.2078 45 1 3.2292 4.3429 -1.5629 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_13287730.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:32:22 Heat of formation + Delta-G solvation = -119.932927 kcal Electronic energy + Delta-G solvation = -29427.328116 eV Core-core repulsion = 24942.153113 eV Total energy + Delta-G solvation = -4485.175002 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.152 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.81538 -42.49743 -41.84909 -40.27776 -39.32226 -37.92849 -37.48852 -35.38575 -33.83070 -32.76584 -31.67305 -29.59682 -27.71291 -27.28402 -26.73818 -25.93060 -24.05043 -23.38822 -22.22010 -21.12772 -20.68282 -20.24345 -19.25978 -18.99964 -18.01410 -17.66304 -17.47825 -17.17977 -16.99002 -16.84935 -16.50831 -16.37497 -15.88494 -15.70252 -15.62075 -15.43251 -15.28771 -14.92729 -14.77940 -14.49428 -14.31854 -14.08122 -13.94855 -13.72882 -13.64890 -13.48037 -13.40660 -13.10626 -13.02457 -12.77240 -12.59345 -12.51793 -12.26458 -12.14346 -11.97404 -11.61031 -11.56530 -11.37787 -10.86553 -10.78829 -10.14037 -9.58597 -9.23980 -5.02215 0.73738 1.02624 1.08382 1.37407 1.54765 1.63290 1.83257 1.99891 2.12303 2.64559 2.78159 2.98875 3.03919 3.10670 3.14859 3.39075 3.51155 3.75981 3.77007 3.78948 3.91305 3.95758 4.01849 4.15182 4.16845 4.20593 4.25255 4.32675 4.35607 4.41792 4.45278 4.52647 4.58191 4.61301 4.67093 4.70760 4.76595 4.89974 4.96978 4.97720 5.01259 5.34467 5.40997 5.65682 5.94137 6.12064 6.27562 6.54616 6.68153 7.38107 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.475 3.525 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.129 4.129 9 C 0.084 3.916 10 F -0.189 7.189 11 C 0.122 3.878 12 N -0.731 5.731 13 C 0.595 3.405 14 O -0.540 6.540 15 C -0.228 4.228 16 C 0.053 3.947 17 N -0.423 5.423 18 C 0.049 3.951 19 C -0.020 4.020 20 C -0.043 4.043 21 O -0.542 6.542 22 Si 0.716 3.284 23 C -0.135 4.135 24 C -0.137 4.137 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.098 0.902 31 H 0.117 0.883 32 H 0.092 0.908 33 H 0.088 0.912 34 H 0.401 0.599 35 H 0.171 0.829 36 H 0.073 0.927 37 H 0.114 0.886 38 H 0.082 0.918 39 H 0.118 0.882 40 H 0.381 0.619 41 H -0.252 1.252 42 H -0.251 1.251 43 H 0.152 0.848 44 H 0.104 0.896 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.579 -0.104 -4.378 4.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.317 3.683 5 O -0.389 6.389 6 C -0.128 4.128 7 H 0.153 0.847 8 C -0.167 4.167 9 C 0.065 3.935 10 F -0.170 7.170 11 C -0.003 4.003 12 N -0.384 5.384 13 C 0.384 3.616 14 O -0.417 6.417 15 C -0.238 4.238 16 C -0.084 4.084 17 N -0.097 5.097 18 C -0.092 4.092 19 C -0.129 4.129 20 C -0.153 4.153 21 O -0.348 6.348 22 Si 0.615 3.385 23 C -0.159 4.159 24 C -0.174 4.174 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.101 0.899 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.117 0.883 31 H 0.135 0.865 32 H 0.110 0.890 33 H 0.106 0.894 34 H 0.236 0.764 35 H 0.188 0.812 36 H 0.092 0.908 37 H 0.132 0.868 38 H 0.101 0.899 39 H 0.135 0.865 40 H 0.229 0.771 41 H -0.177 1.177 42 H -0.175 1.175 43 H 0.170 0.830 44 H 0.123 0.877 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -1.068 0.683 -3.404 3.632 hybrid contribution -0.576 -0.947 -0.895 1.425 sum -1.644 -0.264 -4.299 4.610 Atomic orbital electron populations 1.21827 0.92253 1.03319 1.03701 1.23111 0.95666 0.79686 1.02830 1.86510 1.24138 1.32902 1.83627 1.23223 0.80809 0.91925 0.72352 1.90700 1.60524 1.42767 1.44863 1.22330 0.97275 0.91990 1.01228 0.84665 1.23620 0.93442 0.98585 1.01047 1.22466 0.87692 0.95932 0.87395 1.92890 1.65988 1.97393 1.60689 1.21586 1.04608 0.83118 0.90963 1.45628 1.77050 1.05686 1.10036 1.17357 0.75254 0.81151 0.87868 1.90800 1.50229 1.82377 1.18311 1.20211 1.18227 0.93766 0.91605 1.21952 1.04359 0.89350 0.92713 1.43496 1.54085 1.05099 1.07038 1.22584 1.04067 1.05857 0.76687 1.20756 1.12392 0.91384 0.88394 1.24841 1.02691 0.91816 0.95937 1.86450 1.28234 1.86152 1.33962 0.94049 0.90355 0.78227 0.75832 1.21721 1.05924 0.91801 0.96474 1.23625 0.96746 1.01073 0.95983 0.91309 0.91359 0.89947 0.91051 0.90981 0.88324 0.86515 0.88966 0.89411 0.76405 0.81210 0.90826 0.86753 0.89923 0.86482 0.77075 1.17668 1.17477 0.83014 0.87724 0.88289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.41 10.22 -39.26 -0.40 -0.81 16 4 C 0.47 0.63 7.48 36.01 0.27 0.90 16 5 O -0.50 -2.13 15.65 -18.75 -0.29 -2.42 16 6 C -0.11 0.18 3.91 -90.95 -0.36 -0.17 16 7 H 0.14 -0.47 7.66 -51.93 -0.40 -0.87 16 8 C -0.13 0.19 6.89 -25.92 -0.18 0.01 16 9 C 0.08 -0.13 1.83 -89.81 -0.16 -0.30 16 10 F -0.19 -0.10 16.82 2.25 0.04 -0.06 16 11 C 0.12 -0.11 5.25 -4.04 -0.02 -0.13 16 12 N -0.73 0.16 5.46 -61.43 -0.34 -0.18 16 13 C 0.59 1.80 7.81 -12.59 -0.10 1.70 16 14 O -0.54 -3.73 16.97 5.26 0.09 -3.64 16 15 C -0.23 -0.42 6.29 -103.35 -0.65 -1.07 16 16 C 0.05 -0.05 10.83 -16.84 -0.18 -0.23 16 17 N -0.42 0.43 3.09 -119.90 -0.37 0.06 16 18 C 0.05 -0.17 10.71 59.85 0.64 0.47 16 19 C -0.02 0.00 6.13 -81.87 -0.50 -0.50 16 20 C -0.04 0.05 2.98 36.00 0.11 0.16 16 21 O -0.54 1.15 9.95 -35.23 -0.35 0.80 16 22 Si 0.72 -0.97 31.31 -169.99 -5.32 -6.30 16 23 C -0.14 -0.28 9.50 -37.50 -0.36 -0.63 16 24 C -0.14 0.33 7.09 -25.92 -0.18 0.14 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.25 8.14 -51.92 -0.42 -0.67 16 28 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 30 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 31 H 0.12 0.00 7.44 -51.93 -0.39 -0.38 16 32 H 0.09 -0.14 7.35 -51.93 -0.38 -0.52 16 33 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.40 -0.92 7.13 -40.82 -0.29 -1.21 16 35 H 0.17 -0.70 7.45 -52.49 -0.39 -1.09 16 36 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.11 -0.45 4.94 -51.93 -0.26 -0.70 16 38 H 0.08 -0.43 8.13 -51.93 -0.42 -0.85 16 39 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 40 H 0.38 -2.13 8.38 45.56 0.38 -1.75 16 41 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 42 H -0.25 -0.37 6.77 56.52 0.38 0.01 16 43 H 0.15 0.38 6.68 -52.49 -0.35 0.03 16 44 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 45 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 LS Contribution 380.90 15.07 5.74 5.74 Total: 0.00 -10.52 380.90 -8.61 -19.13 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -6.34 Total: -13.56 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -1.06 Total: 1.24 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.71 Total: -0.11 kcal Atomic # 8 Polarization: -5.12 SS G_CDS: -0.96 Total: -6.08 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.06 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.32 Total: -6.30 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -10.52 -8.61 -19.13 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_13287730.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.805 kcal (2) G-P(sol) polarization free energy of solvation -10.516 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.321 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds