Wall clock time and date at job start Sun Mar 7 2021 09:32:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45192 * 109.47327 * 2 1 4 4 C 1.34233 * 117.00369 * 180.02562 * 3 2 1 5 5 O 1.20822 * 119.99583 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00053 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.91004 * 311.24954 * 6 4 3 8 8 C 1.53962 * 113.66521 * 82.55365 * 6 4 3 9 9 C 1.53782 * 87.11063 * 139.88647 * 8 6 4 10 10 F 1.39903 * 113.68719 * 220.07917 * 9 8 6 11 11 C 1.52994 * 113.61379 * 89.18901 * 9 8 6 12 12 N 1.46498 * 109.47472 * 87.49745 * 11 9 8 13 13 C 1.34777 * 120.00084 * 179.97438 * 12 11 9 14 14 O 1.21551 * 120.00113 * 359.97438 * 13 12 11 15 15 C 1.47845 * 119.99799 * 180.02562 * 13 12 11 16 16 C 1.39517 * 120.55969 * 0.02562 * 15 13 12 17 17 N 1.31697 * 120.56576 * 179.97438 * 16 15 13 18 18 C 1.31919 * 121.87820 * 0.02562 * 17 16 15 19 19 C 1.38353 * 121.08374 * 0.02562 * 18 17 16 20 20 C 1.50701 * 120.35100 * 180.02562 * 19 18 17 21 21 O 1.42908 * 109.46536 * 244.99450 * 20 19 18 22 22 Si 1.86303 * 109.46965 * 4.98941 * 20 19 18 23 23 C 1.38354 * 119.30131 * 359.69184 * 19 18 17 24 24 C 1.53781 * 87.08260 * 334.63747 * 9 8 6 25 25 H 1.09001 * 109.47158 * 300.00129 * 1 2 3 26 26 H 1.08995 * 109.46824 * 59.99745 * 1 2 3 27 27 H 1.08997 * 109.47348 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47158 * 239.99871 * 2 1 3 29 29 H 1.09006 * 109.46796 * 119.99733 * 2 1 3 30 30 H 1.08997 * 113.53543 * 25.33321 * 8 6 4 31 31 H 1.08998 * 113.73879 * 254.46919 * 8 6 4 32 32 H 1.09001 * 109.47094 * 207.50242 * 11 9 8 33 33 H 1.09007 * 109.46785 * 327.49852 * 11 9 8 34 34 H 0.96993 * 119.99775 * 0.02562 * 12 11 9 35 35 H 1.07997 * 119.71724 * 0.02562 * 16 15 13 36 36 H 1.08008 * 119.45943 * 180.02562 * 18 17 16 37 37 H 1.08995 * 109.47566 * 124.99494 * 20 19 18 38 38 H 0.96702 * 113.99748 * 59.99678 * 21 20 19 39 39 H 1.48495 * 109.99905 * 58.68663 * 22 20 19 40 40 H 1.48503 * 109.99563 * 180.02562 * 22 20 19 41 41 H 1.08002 * 120.85850 * 180.29921 * 23 19 18 42 42 H 1.09002 * 113.61445 * 139.98212 * 24 9 8 43 43 H 1.09002 * 113.61408 * 270.79943 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4710 3.5822 -0.7560 8 6 3.9886 3.5787 1.3969 9 6 5.3594 4.1421 0.9866 10 9 6.3143 4.0967 2.0080 11 6 5.2811 5.5105 0.3068 12 7 5.3103 6.5638 1.3245 13 6 5.2527 7.8589 0.9559 14 8 5.1769 8.1530 -0.2211 15 6 5.2828 8.9218 1.9830 16 6 5.3712 8.5976 3.3371 17 7 5.3985 9.5444 4.2521 18 6 5.3437 10.8232 3.9332 19 6 5.2540 11.2269 2.6129 20 6 5.1930 12.6925 2.2672 21 8 3.9259 12.9903 1.6771 22 14 5.4103 13.7053 3.8157 23 6 5.2279 10.2712 1.6129 24 6 5.4583 2.9680 -0.0017 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 1.8934 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8901 30 1 4.0401 2.8516 2.2073 31 1 3.2334 4.3465 1.5645 32 1 6.1304 5.6312 -0.3657 33 1 4.3541 5.5808 -0.2624 34 1 5.3719 6.3291 2.2637 35 1 5.4185 7.5613 3.6374 36 1 5.3693 11.5674 4.7156 37 1 5.9879 12.9328 1.5613 38 1 3.1707 12.8005 2.2506 39 1 6.7103 13.3815 4.4561 40 1 5.3514 15.1526 3.4883 41 1 5.1631 10.5583 0.5737 42 1 5.8893 3.2428 -0.9645 43 1 5.9130 2.0744 0.4260 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_13287814.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:32:33 Heat of formation + Delta-G solvation = -133.024590 kcal Electronic energy + Delta-G solvation = -28658.602707 eV Core-core repulsion = 24200.171486 eV Total energy + Delta-G solvation = -4458.431221 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.136 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -48.92535 -42.00579 -41.83549 -40.42534 -39.46517 -38.00923 -37.54205 -35.79964 -33.81679 -33.28885 -32.77481 -29.77676 -27.39812 -27.36320 -26.98110 -25.19768 -24.01336 -23.87836 -22.29851 -21.71975 -20.54440 -19.40080 -19.17927 -18.32748 -18.14571 -17.92573 -17.77343 -17.65652 -17.01095 -16.71725 -16.65403 -16.47230 -16.04351 -16.02974 -15.67070 -15.39862 -14.94401 -14.85535 -14.70487 -14.42376 -14.35614 -14.24947 -14.05196 -13.78671 -13.68178 -13.59206 -13.06836 -12.82524 -12.79350 -12.66394 -12.56494 -12.30621 -12.17809 -11.70599 -11.59239 -11.47076 -11.41086 -11.09633 -10.66962 -10.62638 -10.47753 -10.30422 -5.18216 -0.64066 -0.07344 1.04034 1.09519 1.49906 1.50600 1.62599 1.70466 1.86470 2.56745 2.67926 2.85560 2.87950 2.99852 3.06779 3.26295 3.29599 3.34720 3.55178 3.62144 3.68941 3.72593 3.88944 3.93332 3.93458 4.04019 4.04663 4.12996 4.23166 4.28224 4.35836 4.37990 4.39314 4.49177 4.56771 4.67141 4.74650 4.77615 4.85286 4.91753 4.96528 5.03192 5.24974 5.37763 6.14074 6.40020 6.57370 6.64179 6.91389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.475 3.525 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.136 4.136 9 C 0.082 3.918 10 F -0.188 7.188 11 C 0.119 3.881 12 N -0.724 5.724 13 C 0.569 3.431 14 O -0.525 6.525 15 C -0.189 4.189 16 C 0.141 3.859 17 N -0.477 5.477 18 C 0.131 3.869 19 C -0.180 4.180 20 C -0.064 4.064 21 O -0.536 6.536 22 Si 0.686 3.314 23 C 0.013 3.987 24 C -0.129 4.129 25 H 0.068 0.932 26 H 0.068 0.932 27 H 0.082 0.918 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.106 0.894 31 H 0.099 0.901 32 H 0.091 0.909 33 H 0.097 0.903 34 H 0.406 0.594 35 H 0.162 0.838 36 H 0.164 0.836 37 H 0.120 0.880 38 H 0.381 0.619 39 H -0.253 1.253 40 H -0.248 1.248 41 H 0.153 0.847 42 H 0.098 0.902 43 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.156 -0.465 2.723 4.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.317 3.683 5 O -0.388 6.388 6 C -0.128 4.128 7 H 0.153 0.847 8 C -0.174 4.174 9 C 0.064 3.936 10 F -0.168 7.168 11 C -0.005 4.005 12 N -0.377 5.377 13 C 0.355 3.645 14 O -0.402 6.402 15 C -0.194 4.194 16 C -0.017 4.017 17 N -0.184 5.184 18 C -0.025 4.025 19 C -0.182 4.182 20 C -0.175 4.175 21 O -0.341 6.341 22 Si 0.587 3.413 23 C -0.013 4.013 24 C -0.167 4.167 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.101 0.899 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.124 0.876 31 H 0.118 0.882 32 H 0.109 0.891 33 H 0.115 0.885 34 H 0.242 0.758 35 H 0.179 0.821 36 H 0.180 0.820 37 H 0.137 0.863 38 H 0.228 0.772 39 H -0.177 1.177 40 H -0.173 1.173 41 H 0.170 0.830 42 H 0.117 0.883 43 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -3.068 -0.047 2.693 4.082 hybrid contribution 0.349 -0.543 -0.882 1.093 sum -2.718 -0.590 1.811 3.319 Atomic orbital electron populations 1.21827 0.92213 1.03351 1.03711 1.23119 0.95691 0.79623 1.02852 1.86507 1.24080 1.32967 1.83610 1.23188 0.80850 0.91876 0.72409 1.90705 1.60535 1.42743 1.44811 1.22351 0.97206 0.92102 1.01188 0.84650 1.23670 0.96457 1.01167 0.96072 1.22461 0.87904 0.95731 0.87552 1.92896 1.65824 1.97340 1.60754 1.21695 1.05033 0.82924 0.90834 1.45678 1.75844 1.05300 1.10910 1.17966 0.76308 0.82037 0.88171 1.90836 1.48760 1.82535 1.18036 1.20962 1.08676 0.94816 0.94977 1.23056 0.91556 0.99395 0.87718 1.67730 1.12490 1.00860 1.37336 1.22897 0.92201 0.93198 0.94214 1.21439 1.04271 0.97975 0.94513 1.25029 0.89737 0.93778 1.09003 1.86554 1.14394 1.87751 1.45380 0.94879 0.86999 0.79918 0.79485 1.21635 0.88358 0.90217 1.01105 1.23628 0.93541 0.98555 1.00942 0.91334 0.91308 0.89923 0.90978 0.91019 0.87556 0.88199 0.89103 0.88529 0.75801 0.82115 0.81961 0.86271 0.77200 1.17722 1.17252 0.82970 0.88330 0.86401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.23 10.22 -39.27 -0.40 -0.63 16 4 C 0.47 0.37 7.49 36.01 0.27 0.64 16 5 O -0.50 -1.90 15.65 -18.75 -0.29 -2.20 16 6 C -0.11 0.27 3.92 -90.86 -0.36 -0.09 16 7 H 0.14 -0.60 7.73 -51.93 -0.40 -1.00 16 8 C -0.14 0.43 7.07 -25.82 -0.18 0.25 16 9 C 0.08 -0.20 1.91 -89.81 -0.17 -0.37 16 10 F -0.19 0.05 16.61 2.25 0.04 0.09 16 11 C 0.12 -0.27 5.27 -4.05 -0.02 -0.29 16 12 N -0.72 1.17 5.40 -61.25 -0.33 0.84 16 13 C 0.57 0.60 7.78 -12.33 -0.10 0.50 16 14 O -0.53 -2.40 16.42 5.32 0.09 -2.31 16 15 C -0.19 -0.04 5.89 -104.82 -0.62 -0.66 16 16 C 0.14 -0.12 10.71 -17.13 -0.18 -0.30 16 17 N -0.48 -0.17 10.35 -12.91 -0.13 -0.30 16 18 C 0.13 -0.13 9.84 -17.47 -0.17 -0.30 16 19 C -0.18 0.15 5.35 -104.54 -0.56 -0.41 16 20 C -0.06 0.09 2.82 36.01 0.10 0.19 16 21 O -0.54 0.44 12.84 -35.23 -0.45 -0.01 16 22 Si 0.69 -1.66 29.83 -169.99 -5.07 -6.73 16 23 C 0.01 0.01 9.38 -38.87 -0.36 -0.36 16 24 C -0.13 0.28 6.88 -25.92 -0.18 0.10 16 25 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 29 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 30 H 0.11 -0.28 8.09 -51.93 -0.42 -0.70 16 31 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 32 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.10 -0.29 7.40 -51.93 -0.38 -0.68 16 34 H 0.41 -1.38 6.09 -40.82 -0.25 -1.63 16 35 H 0.16 -0.59 6.42 -52.49 -0.34 -0.93 16 36 H 0.16 -0.54 4.91 -52.48 -0.26 -0.80 16 37 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 38 H 0.38 -1.83 8.70 45.56 0.40 -1.43 16 39 H -0.25 0.02 7.11 56.52 0.40 0.43 16 40 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 41 H 0.15 0.17 7.74 -52.49 -0.41 -0.24 16 42 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 43 H 0.12 -0.06 7.43 -51.93 -0.39 -0.45 16 LS Contribution 369.83 15.07 5.57 5.57 Total: 0.00 -10.24 369.83 -8.34 -18.58 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -5.43 Total: -12.73 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -1.92 Total: -0.16 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.46 Total: 0.53 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.06 Total: -5.15 kcal Atomic # 9 Polarization: 0.05 SS G_CDS: 0.04 Total: 0.09 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.07 Total: -6.73 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -10.24 -8.34 -18.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_13287814.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.445 kcal (2) G-P(sol) polarization free energy of solvation -10.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.337 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds