Wall clock time and date at job start Sun Mar 7 2021 09:33:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45206 * 109.47226 * 2 1 4 4 C 1.34224 * 117.00068 * 179.97438 * 3 2 1 5 5 O 1.20827 * 120.00202 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99813 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84791 * 50.33783 * 6 4 3 8 8 C 1.53788 * 113.61276 * 181.52990 * 6 4 3 9 9 C 1.53787 * 87.07835 * 139.98039 * 8 6 4 10 10 F 1.39893 * 113.61159 * 220.01971 * 9 8 6 11 11 C 1.53001 * 113.60928 * 89.11781 * 9 8 6 12 12 N 1.46503 * 109.46721 * 179.97438 * 11 9 8 13 13 C 1.34771 * 119.99998 * 180.02562 * 12 11 9 14 14 O 1.21616 * 120.00153 * 359.97438 * 13 12 11 15 15 C 1.47380 * 120.00201 * 179.97438 * 13 12 11 16 16 C 1.36422 * 127.19108 * 359.68710 * 15 13 12 17 17 O 1.33653 * 108.39798 * 179.89345 * 16 15 13 18 18 C 1.34215 * 110.90659 * 0.38775 * 17 16 15 19 19 C 1.50699 * 125.43828 * 179.76644 * 18 17 16 20 20 O 1.42900 * 109.46905 * 244.99550 * 19 18 17 21 21 Si 1.86304 * 109.46826 * 4.99278 * 19 18 17 22 22 C 1.34176 * 109.12486 * 359.75721 * 18 17 16 23 23 C 1.53779 * 113.61558 * 279.13914 * 6 4 3 24 24 H 1.09002 * 109.47153 * 299.99431 * 1 2 3 25 25 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.47261 * 59.99603 * 1 2 3 27 27 H 1.08996 * 109.47853 * 120.00540 * 2 1 3 28 28 H 1.09002 * 109.47153 * 240.00569 * 2 1 3 29 29 H 1.08997 * 113.61485 * 254.52846 * 8 6 4 30 30 H 1.08997 * 113.61114 * 25.34723 * 8 6 4 31 31 H 1.08994 * 109.47184 * 299.99525 * 11 9 8 32 32 H 1.08992 * 109.47662 * 60.00040 * 11 9 8 33 33 H 0.97002 * 120.00121 * 359.97438 * 12 11 9 34 34 H 1.08002 * 125.79890 * 0.02562 * 16 15 13 35 35 H 1.09000 * 109.47448 * 124.99291 * 19 18 17 36 36 H 0.96703 * 113.99740 * 179.97438 * 20 19 18 37 37 H 1.48508 * 109.99874 * 178.68107 * 21 19 18 38 38 H 1.48493 * 110.00253 * 300.00348 * 21 19 18 39 39 H 1.07998 * 127.02233 * 179.97438 * 22 18 17 40 40 H 1.09005 * 113.61001 * 334.56595 * 23 6 4 41 41 H 1.08992 * 113.61675 * 105.46916 * 23 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9375 0.0012 7 1 3.4897 3.5734 0.7744 8 6 5.4578 2.9684 -0.0359 9 6 5.3321 4.1531 -1.0084 10 9 6.2598 4.1198 -2.0549 11 6 5.2688 5.5138 -0.3116 12 7 5.1510 6.5724 -1.3175 13 6 5.0792 7.8621 -0.9332 14 8 5.1118 8.1472 0.2486 15 6 4.9613 8.9271 -1.9451 16 6 4.9178 8.7760 -3.3002 17 8 4.8053 9.9861 -3.8562 18 6 4.7805 10.9444 -2.9169 19 6 4.6673 12.4238 -3.1806 20 8 5.8660 13.0762 -2.7569 21 14 4.4146 12.7119 -5.0038 22 6 4.8722 10.3749 -1.7054 23 6 3.9498 3.5927 -1.3898 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5139 -0.8900 27 1 1.8934 -0.5139 0.8899 28 1 1.8933 -0.5137 -0.8900 29 1 5.9123 3.2334 0.9187 30 1 5.9016 2.0793 -0.4837 31 1 4.4033 5.5431 0.3502 32 1 6.1771 5.6663 0.2711 33 1 5.1254 6.3450 -2.2602 34 1 4.9641 7.8377 -3.8330 35 1 3.8190 12.8276 -2.6279 36 1 5.8638 14.0330 -2.8972 37 1 4.2697 14.1652 -5.2730 38 1 5.5644 12.1659 -5.7685 39 1 4.8797 10.8775 -0.7495 40 1 3.9807 2.8752 -2.2098 41 1 3.1888 4.3609 -1.5266 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:33:03 Heat of formation + Delta-G solvation = -151.732240 kcal Electronic energy + Delta-G solvation = -27334.758831 eV Core-core repulsion = 22906.023864 eV Total energy + Delta-G solvation = -4428.734967 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.125 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -48.87889 -43.70817 -41.88246 -40.54342 -39.42098 -38.11412 -37.52265 -35.59505 -33.95415 -32.78252 -32.09500 -29.66374 -27.36521 -27.02345 -26.42418 -24.50996 -23.89786 -22.28821 -22.17506 -21.06671 -20.29300 -19.31234 -18.98759 -18.80012 -18.04391 -17.68726 -17.49573 -17.23165 -17.13555 -16.63721 -16.50745 -16.17635 -15.92857 -15.80549 -15.61785 -15.35226 -14.82352 -14.63184 -14.36182 -14.12316 -14.04689 -14.00663 -13.77666 -13.70253 -13.66707 -13.05332 -12.82973 -12.80988 -12.64472 -12.54708 -12.24789 -12.10862 -11.67233 -11.58214 -11.40943 -11.12792 -10.88516 -10.70076 -10.29893 -9.79450 -5.03635 0.21983 0.86840 1.06043 1.09559 1.38786 1.52056 1.68929 1.84203 1.91422 2.31447 2.70906 2.91765 2.94868 3.09633 3.19276 3.33943 3.45999 3.54925 3.74368 3.85493 3.89883 3.94319 3.96851 4.08750 4.14393 4.23998 4.29795 4.34783 4.40510 4.46868 4.55160 4.59425 4.61920 4.68434 4.75394 4.78952 4.94784 4.97570 5.14138 5.24170 5.38960 5.86121 6.24487 6.30377 6.65696 7.10925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.129 4.129 9 C 0.083 3.917 10 F -0.189 7.189 11 C 0.121 3.879 12 N -0.727 5.727 13 C 0.593 3.407 14 O -0.528 6.528 15 C -0.238 4.238 16 C 0.037 3.963 17 O -0.164 6.164 18 C -0.010 4.010 19 C -0.039 4.039 20 O -0.533 6.533 21 Si 0.701 3.299 22 C -0.120 4.120 23 C -0.136 4.136 24 H 0.068 0.932 25 H 0.082 0.918 26 H 0.068 0.932 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.098 0.902 30 H 0.117 0.883 31 H 0.095 0.905 32 H 0.089 0.911 33 H 0.403 0.597 34 H 0.215 0.785 35 H 0.098 0.902 36 H 0.389 0.611 37 H -0.253 1.253 38 H -0.251 1.251 39 H 0.162 0.838 40 H 0.105 0.895 41 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.671 0.178 -2.959 6.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.317 3.683 5 O -0.388 6.388 6 C -0.128 4.128 7 H 0.154 0.846 8 C -0.167 4.167 9 C 0.064 3.936 10 F -0.169 7.169 11 C -0.003 4.003 12 N -0.381 5.381 13 C 0.381 3.619 14 O -0.405 6.405 15 C -0.243 4.243 16 C -0.034 4.034 17 O -0.060 6.060 18 C -0.058 4.058 19 C -0.147 4.147 20 O -0.342 6.342 21 Si 0.600 3.400 22 C -0.140 4.140 23 C -0.174 4.174 24 H 0.087 0.913 25 H 0.101 0.899 26 H 0.087 0.913 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.117 0.883 30 H 0.135 0.865 31 H 0.114 0.886 32 H 0.107 0.893 33 H 0.238 0.762 34 H 0.232 0.768 35 H 0.116 0.884 36 H 0.238 0.762 37 H -0.177 1.177 38 H -0.175 1.175 39 H 0.180 0.820 40 H 0.124 0.876 41 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -4.973 -0.086 -2.985 5.801 hybrid contribution 0.764 0.296 0.301 0.873 sum -4.209 0.209 -2.683 4.996 Atomic orbital electron populations 1.21827 0.92222 1.03338 1.03709 1.23116 0.95683 0.79644 1.02846 1.86508 1.24090 1.32942 1.83618 1.23210 0.80841 0.91900 0.72392 1.90706 1.60529 1.42759 1.44826 1.22331 0.97217 0.91987 1.01274 0.84637 1.23613 0.93581 0.98375 1.01085 1.22501 0.88403 0.95810 0.86910 1.92895 1.67609 1.97414 1.58960 1.21641 1.04814 0.82905 0.90981 1.45612 1.76442 1.05547 1.10457 1.17203 0.75827 0.81232 0.87686 1.90832 1.49379 1.82662 1.17638 1.21411 1.14999 0.94717 0.93172 1.24483 0.99184 0.87516 0.92223 1.83670 1.70531 1.14537 1.37287 1.21071 1.08619 0.89659 0.86474 1.23840 0.90463 0.86535 1.13893 1.86577 1.37251 1.25463 1.84895 0.94518 0.89172 0.82651 0.73692 1.22478 1.02056 0.90809 0.98613 1.23660 0.96531 1.01036 0.96162 0.91305 0.89937 0.91336 0.90984 0.91033 0.88315 0.86455 0.88649 0.89251 0.76235 0.76824 0.88395 0.76193 1.17712 1.17519 0.82021 0.87619 0.88201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.26 10.22 -39.24 -0.40 -0.66 16 4 C 0.47 0.43 7.48 36.01 0.27 0.70 16 5 O -0.50 -1.97 15.66 -18.75 -0.29 -2.26 16 6 C -0.11 0.24 3.90 -90.95 -0.35 -0.11 16 7 H 0.14 -0.56 7.66 -51.93 -0.40 -0.96 16 8 C -0.13 0.24 6.88 -25.91 -0.18 0.06 16 9 C 0.08 -0.18 1.84 -89.71 -0.16 -0.34 16 10 F -0.19 -0.01 16.82 2.25 0.04 0.03 16 11 C 0.12 -0.20 5.24 -4.04 -0.02 -0.22 16 12 N -0.73 0.78 5.46 -61.40 -0.34 0.45 16 13 C 0.59 1.35 7.81 -12.54 -0.10 1.25 16 14 O -0.53 -3.28 16.98 5.26 0.09 -3.19 16 15 C -0.24 -0.33 6.31 -103.27 -0.65 -0.98 16 16 C 0.04 -0.05 11.61 30.08 0.35 0.30 16 17 O -0.16 -0.07 8.90 7.65 0.07 0.00 16 18 C -0.01 -0.01 6.22 -35.74 -0.22 -0.23 16 19 C -0.04 0.03 2.96 36.01 0.11 0.14 16 20 O -0.53 -0.27 12.86 -35.23 -0.45 -0.72 16 21 Si 0.70 -1.06 32.09 -169.99 -5.46 -6.52 16 22 C -0.12 -0.28 10.90 -37.46 -0.41 -0.69 16 23 C -0.14 0.42 7.10 -25.83 -0.18 0.24 16 24 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 25 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 30 H 0.12 -0.04 7.45 -51.93 -0.39 -0.43 16 31 H 0.10 -0.23 7.34 -51.93 -0.38 -0.61 16 32 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.40 -1.39 7.16 -40.82 -0.29 -1.68 16 34 H 0.22 -1.26 7.47 -52.49 -0.39 -1.65 16 35 H 0.10 -0.31 7.96 -51.93 -0.41 -0.72 16 36 H 0.39 -1.54 8.74 45.56 0.40 -1.14 16 37 H -0.25 0.04 7.11 56.52 0.40 0.44 16 38 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 39 H 0.16 0.39 8.06 -52.49 -0.42 -0.03 16 40 H 0.11 -0.27 8.09 -51.93 -0.42 -0.69 16 41 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 LS Contribution 362.92 15.07 5.47 5.47 Total: 0.00 -11.33 362.92 -7.50 -18.83 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -5.28 Total: -12.46 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -0.95 Total: 1.03 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.34 Total: 0.45 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -0.99 Total: -6.84 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.04 Total: 0.03 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.46 Total: -6.52 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -11.33 -7.50 -18.83 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.899 kcal (2) G-P(sol) polarization free energy of solvation -11.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.230 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.833 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds