Wall clock time and date at job start Sun Mar 7 2021 09:33:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45205 * 109.46745 * 2 1 4 4 C 1.34231 * 116.99661 * 180.02562 * 3 2 1 5 5 O 1.20818 * 120.00531 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99726 * 180.02562 * 4 3 2 7 7 H 1.09006 * 112.84959 * 311.19710 * 6 4 3 8 8 C 1.54049 * 113.62090 * 82.50507 * 6 4 3 9 9 C 1.53782 * 86.98845 * 139.97973 * 8 6 4 10 10 F 1.39899 * 113.61522 * 219.98317 * 9 8 6 11 11 C 1.52998 * 113.61347 * 89.15769 * 9 8 6 12 12 N 1.46501 * 109.46852 * 85.86917 * 11 9 8 13 13 C 1.34772 * 120.00326 * 179.97438 * 12 11 9 14 14 O 1.21281 * 120.00086 * 0.02562 * 13 12 11 15 15 C 1.50701 * 120.00298 * 180.02562 * 13 12 11 16 16 C 1.52994 * 109.47158 * 180.02562 * 15 13 12 17 17 O 1.42900 * 109.47389 * 180.02562 * 16 15 13 18 18 C 1.35899 * 117.00511 * 180.02562 * 17 16 15 19 19 C 1.38726 * 120.05721 * 180.02562 * 18 17 16 20 20 C 1.38153 * 119.94564 * 180.02562 * 19 18 17 21 21 C 1.38269 * 120.05022 * 0.02562 * 20 19 18 22 22 C 1.50700 * 119.93900 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.47341 * 300.00123 * 22 21 20 24 24 Si 1.86300 * 109.46849 * 180.02562 * 22 21 20 25 25 C 1.38264 * 120.11486 * 0.25533 * 21 20 19 26 26 C 1.38138 * 120.05431 * 359.44549 * 25 21 20 27 27 C 1.53784 * 113.61614 * 180.02562 * 6 4 3 28 28 H 1.09003 * 109.46975 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.46937 * 299.99155 * 1 2 3 30 30 H 1.08993 * 109.47505 * 59.99639 * 1 2 3 31 31 H 1.09005 * 109.47139 * 240.00455 * 2 1 3 32 32 H 1.08993 * 109.47505 * 120.00361 * 2 1 3 33 33 H 1.09000 * 113.61417 * 25.47473 * 8 6 4 34 34 H 1.08996 * 113.69864 * 254.49501 * 8 6 4 35 35 H 1.08990 * 109.47628 * 325.86685 * 11 9 8 36 36 H 1.09001 * 109.46992 * 205.86444 * 11 9 8 37 37 H 0.96999 * 119.99945 * 359.97438 * 12 11 9 38 38 H 1.08996 * 109.47386 * 60.00199 * 15 13 12 39 39 H 1.09001 * 109.46860 * 299.99825 * 15 13 12 40 40 H 1.09007 * 109.47542 * 59.99595 * 16 15 13 41 41 H 1.09003 * 109.47466 * 299.99915 * 16 15 13 42 42 H 1.07999 * 120.03394 * 359.97438 * 19 18 17 43 43 H 1.07995 * 119.97802 * 179.97438 * 20 19 18 44 44 H 1.09000 * 109.46989 * 60.00454 * 22 21 20 45 45 H 0.96693 * 114.00306 * 299.99773 * 23 22 21 46 46 H 1.48506 * 110.00048 * 58.68772 * 24 22 21 47 47 H 1.48502 * 109.99996 * 180.02562 * 24 22 21 48 48 H 1.08002 * 119.97450 * 179.70367 * 25 21 20 49 49 H 1.08003 * 120.02825 * 180.25290 * 26 25 21 50 50 H 1.09002 * 113.61272 * 105.46575 * 27 6 4 51 51 H 1.09004 * 113.68671 * 334.57742 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5869 -0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4706 3.5820 -0.7552 8 6 3.9870 3.5775 1.3997 9 6 5.3567 4.1422 0.9876 10 9 6.3114 4.0984 2.0094 11 6 5.2762 5.5104 0.3078 12 7 5.2665 6.5624 1.3274 13 6 5.2001 7.8572 0.9592 14 8 5.1479 8.1515 -0.2162 15 6 5.1907 8.9393 2.0080 16 6 5.1100 10.3076 1.3283 17 8 5.1017 11.3338 2.3227 18 6 5.0323 12.6180 1.8836 19 6 5.0207 13.6641 2.7947 20 6 4.9496 14.9688 2.3458 21 6 4.8894 15.2321 0.9897 22 6 4.8113 16.6562 0.5028 23 8 3.6355 17.2754 1.0281 24 14 4.7426 16.6730 -1.3588 25 6 4.8949 14.1910 0.0799 26 6 4.9722 12.8850 0.5235 27 6 5.4581 2.9683 -0.0013 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8901 30 1 -0.3634 0.5138 -0.8899 31 1 1.8933 -0.5138 -0.8901 32 1 1.8934 -0.5138 0.8899 33 1 4.0404 2.8505 2.2101 34 1 3.2310 4.3445 1.5671 35 1 4.3625 5.5692 -0.2835 36 1 6.1398 5.6439 -0.3437 37 1 5.3078 6.3271 2.2675 38 1 6.1044 8.8803 2.5992 39 1 4.3270 8.8062 2.6596 40 1 4.1959 10.3664 0.7372 41 1 5.9733 10.4410 0.6764 42 1 5.0665 13.4589 3.8540 43 1 4.9402 15.7835 3.0545 44 1 5.6916 17.2039 0.8392 45 1 2.8122 16.8397 0.7687 46 1 3.5639 15.9026 -1.8305 47 1 4.6660 18.0718 -1.8516 48 1 4.8430 14.3991 -0.9786 49 1 4.9805 12.0723 -0.1877 50 1 5.8884 3.2441 -0.9641 51 1 5.9144 2.0754 0.4261 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:33:30 Heat of formation + Delta-G solvation = -187.489075 kcal Electronic energy + Delta-G solvation = -33601.781271 eV Core-core repulsion = 28576.656774 eV Total energy + Delta-G solvation = -5025.124497 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.172 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -48.82753 -41.92005 -41.37805 -40.78385 -39.47482 -39.14015 -37.63565 -37.29324 -35.60713 -33.42449 -32.70895 -32.05040 -31.48241 -29.57593 -27.20983 -26.97154 -26.28039 -25.19376 -23.93867 -23.39922 -22.26053 -22.20049 -21.47453 -20.30402 -19.49367 -19.22529 -18.44337 -18.16435 -17.82977 -17.72580 -17.50523 -17.30991 -16.91592 -16.58573 -16.47732 -16.34089 -16.11245 -15.95724 -15.79802 -15.49049 -15.32348 -14.85657 -14.71587 -14.60545 -14.51777 -14.37641 -14.29099 -14.10353 -13.82375 -13.66468 -13.51253 -13.46517 -13.01264 -12.86210 -12.80694 -12.68203 -12.53700 -12.45263 -12.28140 -12.21115 -12.04959 -11.76360 -11.60161 -11.59782 -11.52390 -11.44842 -11.10643 -10.59783 -10.25832 -10.02426 -9.20395 -4.92471 0.29303 0.32088 0.99319 1.32522 1.50000 1.55384 1.59296 1.64874 1.94855 2.40054 2.66612 2.86697 3.06120 3.09425 3.23581 3.43830 3.47036 3.57547 3.72793 3.82639 3.84292 3.89888 3.92892 3.94791 4.01380 4.03527 4.16203 4.25293 4.27707 4.29725 4.36069 4.45574 4.47858 4.56441 4.58509 4.64750 4.67071 4.69755 4.71805 4.77471 4.80726 4.82531 4.87558 4.99099 5.08242 5.12124 5.19408 5.24433 5.30166 5.39230 5.50379 5.73510 6.32050 6.37619 6.49868 6.59221 7.07709 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.472 3.528 5 O -0.538 6.538 6 C -0.105 4.105 7 H 0.161 0.839 8 C -0.128 4.128 9 C 0.090 3.910 10 F -0.202 7.202 11 C 0.119 3.881 12 N -0.718 5.718 13 C 0.525 3.475 14 O -0.576 6.576 15 C -0.134 4.134 16 C 0.072 3.928 17 O -0.322 6.322 18 C 0.124 3.876 19 C -0.159 4.159 20 C -0.060 4.060 21 C -0.159 4.159 22 C -0.075 4.075 23 O -0.549 6.549 24 Si 0.759 3.241 25 C -0.080 4.080 26 C -0.209 4.209 27 C -0.133 4.133 28 H 0.095 0.905 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.119 0.881 35 H 0.106 0.894 36 H 0.082 0.918 37 H 0.418 0.582 38 H 0.125 0.875 39 H 0.128 0.872 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.141 0.859 43 H 0.139 0.861 44 H 0.125 0.875 45 H 0.385 0.615 46 H -0.286 1.286 47 H -0.302 1.302 48 H 0.144 0.856 49 H 0.142 0.858 50 H 0.111 0.889 51 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.833 -2.610 0.913 3.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.274 6.274 4 C 0.317 3.683 5 O -0.428 6.428 6 C -0.123 4.123 7 H 0.178 0.822 8 C -0.166 4.166 9 C 0.071 3.929 10 F -0.182 7.182 11 C -0.005 4.005 12 N -0.371 5.371 13 C 0.313 3.687 14 O -0.456 6.456 15 C -0.173 4.173 16 C -0.004 4.004 17 O -0.236 6.236 18 C 0.079 3.921 19 C -0.178 4.178 20 C -0.078 4.078 21 C -0.160 4.160 22 C -0.184 4.184 23 O -0.357 6.357 24 Si 0.665 3.335 25 C -0.097 4.097 26 C -0.227 4.227 27 C -0.171 4.171 28 H 0.114 0.886 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.086 0.914 32 H 0.086 0.914 33 H 0.116 0.884 34 H 0.137 0.863 35 H 0.124 0.876 36 H 0.100 0.900 37 H 0.255 0.745 38 H 0.143 0.857 39 H 0.146 0.854 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.159 0.841 43 H 0.157 0.843 44 H 0.143 0.857 45 H 0.234 0.766 46 H -0.212 1.212 47 H -0.231 1.231 48 H 0.161 0.839 49 H 0.160 0.840 50 H 0.129 0.871 51 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.667 -2.211 -0.134 2.772 hybrid contribution -0.866 -0.692 0.774 1.352 sum -2.533 -2.903 0.640 3.906 Atomic orbital electron populations 1.21827 0.90679 1.04264 1.03797 1.23264 0.96930 0.79284 1.02515 1.86521 1.24085 1.33504 1.83336 1.23841 0.80619 0.92745 0.71123 1.90687 1.61200 1.44228 1.46640 1.22531 0.96780 0.90564 1.02452 0.82154 1.23661 0.96529 1.01203 0.95199 1.22451 0.87777 0.95654 0.86989 1.92871 1.66518 1.97415 1.61382 1.21684 1.05164 0.82806 0.90873 1.45706 1.74956 1.05010 1.11407 1.20535 0.74877 0.83827 0.89497 1.90754 1.51073 1.83184 1.20588 1.21432 1.08208 0.89806 0.97898 1.22477 1.02789 0.85275 0.89816 1.85958 1.88403 1.12720 1.36497 1.19177 0.96073 0.84016 0.92883 1.20669 1.06293 0.90727 1.00085 1.20970 0.95576 0.95849 0.95360 1.20254 1.05849 0.95620 0.94263 1.25103 0.90760 0.91428 1.11098 1.86559 1.16729 1.57330 1.75063 0.94154 0.87963 0.78131 0.73272 1.20996 0.97253 0.91759 0.99708 1.21423 1.08174 0.98553 0.94586 1.23628 0.93847 0.98009 1.01638 0.88638 0.91170 0.91203 0.91386 0.91393 0.88376 0.86278 0.87596 0.89957 0.74489 0.85730 0.85385 0.91374 0.91370 0.84122 0.84300 0.85677 0.76560 1.21226 1.23073 0.83902 0.84047 0.87091 0.88391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.72 10.29 71.98 0.74 1.46 16 2 C 0.05 -0.02 6.19 71.98 0.45 0.42 16 3 O -0.36 -0.48 10.22 -51.43 -0.53 -1.00 16 4 C 0.47 0.89 7.49 71.24 0.53 1.43 16 5 O -0.54 -4.75 15.65 21.99 0.34 -4.41 16 6 C -0.10 0.59 3.91 -10.92 -0.04 0.54 16 7 H 0.16 -1.72 7.70 -2.38 -0.02 -1.74 16 8 C -0.13 0.96 7.08 31.21 0.22 1.18 16 9 C 0.09 -0.53 1.88 -10.25 -0.02 -0.55 16 10 F -0.20 0.18 16.67 44.97 0.75 0.93 16 11 C 0.12 -0.75 5.26 86.38 0.45 -0.29 16 12 N -0.72 4.56 5.45 -463.08 -2.53 2.03 16 13 C 0.53 -1.16 7.83 87.66 0.69 -0.47 16 14 O -0.58 -3.38 15.98 -3.03 -0.05 -3.43 16 15 C -0.13 0.82 6.07 29.85 0.18 1.00 16 16 C 0.07 -0.08 4.03 71.98 0.29 0.21 16 17 O -0.32 -0.66 10.14 -92.42 -0.94 -1.60 16 18 C 0.12 0.40 6.69 22.51 0.15 0.55 16 19 C -0.16 -0.38 9.99 22.37 0.22 -0.15 16 20 C -0.06 -0.10 9.61 22.26 0.21 0.11 16 21 C -0.16 -0.16 5.39 -19.85 -0.11 -0.27 16 22 C -0.07 0.00 2.82 71.24 0.20 0.20 16 23 O -0.55 -1.66 12.76 -148.98 -1.90 -3.56 16 24 Si 0.76 -0.72 29.78 68.60 2.04 1.32 16 25 C -0.08 -0.04 8.66 22.25 0.19 0.16 16 26 C -0.21 -0.36 9.04 22.37 0.20 -0.16 16 27 C -0.13 0.59 6.89 31.14 0.21 0.81 16 28 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 29 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 30 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 31 H 0.07 0.01 8.13 -2.38 -0.02 -0.01 16 32 H 0.07 0.00 8.13 -2.39 -0.02 -0.02 16 33 H 0.10 -0.53 8.10 -2.39 -0.02 -0.55 16 34 H 0.12 -1.33 8.10 -2.39 -0.02 -1.35 16 35 H 0.11 -0.87 7.37 -2.39 -0.02 -0.89 16 36 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 37 H 0.42 -4.21 8.08 -92.71 -0.75 -4.96 16 38 H 0.12 -1.11 8.14 -2.39 -0.02 -1.13 16 39 H 0.13 -1.26 8.14 -2.39 -0.02 -1.28 16 40 H 0.07 -0.02 7.62 -2.38 -0.02 -0.04 16 41 H 0.07 0.00 7.62 -2.39 -0.02 -0.02 16 42 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 43 H 0.14 -0.01 8.06 -2.91 -0.02 -0.04 16 44 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 45 H 0.39 -0.88 8.70 -74.06 -0.64 -1.52 16 46 H -0.29 -0.88 7.11 99.48 0.71 -0.17 16 47 H -0.30 -2.02 7.11 99.48 0.71 -1.31 16 48 H 0.14 -0.46 4.87 -2.91 -0.01 -0.48 16 49 H 0.14 -0.06 6.30 -2.91 -0.02 -0.07 16 50 H 0.11 -0.80 8.10 -2.39 -0.02 -0.82 16 51 H 0.10 0.01 7.44 -2.39 -0.02 -0.01 16 Total: 0.00 -23.63 429.18 1.60 -22.03 By element: Atomic # 1 Polarization: -18.10 SS G_CDS: -0.38 Total: -18.48 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: 4.78 Total: 6.16 kcal Atomic # 7 Polarization: 4.56 SS G_CDS: -2.53 Total: 2.03 kcal Atomic # 8 Polarization: -10.93 SS G_CDS: -3.07 Total: -14.00 kcal Atomic # 9 Polarization: 0.18 SS G_CDS: 0.75 Total: 0.93 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 2.04 Total: 1.32 kcal Total: -23.63 1.60 -22.03 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.458 kcal (2) G-P(sol) polarization free energy of solvation -23.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.599 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.031 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds