Wall clock time and date at job start Sun Mar 7 2021 09:34:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45200 * 109.46767 * 2 1 4 4 C 1.34230 * 116.99904 * 179.97438 * 3 2 1 5 5 O 1.20821 * 120.00141 * 0.02562 * 4 3 2 6 6 C 1.50707 * 120.00135 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85024 * 48.79842 * 6 4 3 8 8 C 1.53774 * 113.61486 * 179.97438 * 6 4 3 9 9 C 1.53782 * 87.08121 * 89.11764 * 8 6 4 10 10 F 1.39898 * 113.61092 * 270.79834 * 9 8 6 11 11 C 1.52995 * 113.61864 * 139.98045 * 9 8 6 12 12 N 1.46501 * 109.47636 * 181.52486 * 11 9 8 13 13 C 1.34770 * 120.00122 * 179.97438 * 12 11 9 14 14 O 1.21282 * 120.00256 * 0.02562 * 13 12 11 15 15 C 1.50703 * 120.00010 * 180.02562 * 13 12 11 16 16 F 1.39900 * 109.46716 * 59.99962 * 15 13 12 17 17 F 1.39900 * 109.47171 * 300.00315 * 15 13 12 18 18 O 1.42902 * 109.47357 * 180.02562 * 15 13 12 19 19 C 1.35898 * 116.99694 * 180.02562 * 18 15 13 20 20 C 1.38735 * 120.05254 * 179.97438 * 19 18 15 21 21 C 1.38144 * 119.94607 * 179.97438 * 20 19 18 22 22 C 1.38266 * 120.05233 * 0.02562 * 21 20 19 23 23 C 1.50708 * 119.94156 * 179.97438 * 22 21 20 24 24 O 1.42901 * 109.46774 * 120.00182 * 23 22 21 25 25 Si 1.86295 * 109.47138 * 359.97438 * 23 22 21 26 26 C 1.38269 * 120.11595 * 359.95530 * 22 21 20 27 27 C 1.38142 * 120.04935 * 0.04230 * 26 22 21 28 28 C 1.53780 * 87.17430 * 25.38877 * 9 8 6 29 29 H 1.09010 * 109.46553 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.47309 * 299.99715 * 1 2 3 31 31 H 1.09000 * 109.46977 * 60.00380 * 1 2 3 32 32 H 1.09001 * 109.47562 * 239.99931 * 2 1 3 33 33 H 1.08995 * 109.47421 * 119.99479 * 2 1 3 34 34 H 1.08996 * 113.61509 * 334.56675 * 8 6 4 35 35 H 1.08998 * 113.61088 * 203.66091 * 8 6 4 36 36 H 1.09008 * 109.47036 * 61.52892 * 11 9 8 37 37 H 1.09001 * 109.47480 * 301.52938 * 11 9 8 38 38 H 0.96998 * 119.99602 * 359.97438 * 12 11 9 39 39 H 1.08002 * 120.02704 * 359.70561 * 20 19 18 40 40 H 1.08001 * 119.97447 * 179.97438 * 21 20 19 41 41 H 1.08998 * 109.47022 * 239.99836 * 23 22 21 42 42 H 0.96702 * 113.99901 * 299.99382 * 24 23 22 43 43 H 1.48493 * 110.00085 * 180.02562 * 25 23 22 44 44 H 1.48509 * 109.99954 * 301.32068 * 25 23 22 45 45 H 1.07992 * 119.97577 * 180.02562 * 26 22 21 46 46 H 1.08005 * 120.02748 * 179.97438 * 27 26 22 47 47 H 1.08994 * 113.61298 * 89.16351 * 28 9 8 48 48 H 1.09001 * 113.61310 * 220.06205 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9376 0.0012 7 1 3.4707 3.5814 0.7570 8 6 5.4581 2.9683 0.0024 9 6 5.3814 2.9433 -1.5334 10 9 5.3613 1.6525 -2.0724 11 6 6.4049 3.8550 -2.2131 12 7 6.2285 3.7895 -3.6660 13 6 7.0248 4.5160 -4.4749 14 8 7.8878 5.2236 -4.0002 15 6 6.8430 4.4490 -5.9694 16 9 5.5505 4.8693 -6.3012 17 9 7.0310 3.1324 -6.4035 18 8 7.7990 5.3005 -6.6043 19 6 7.7700 5.3563 -7.9618 20 6 8.6695 6.1631 -8.6434 21 6 8.6383 6.2178 -10.0234 22 6 7.7113 5.4695 -10.7253 23 6 7.6792 5.5315 -12.2307 24 8 7.9121 4.2272 -12.7661 25 14 9.0028 6.6961 -12.8327 26 6 6.8140 4.6643 -10.0484 27 6 6.8412 4.6062 -8.6684 28 6 3.9865 3.5762 -1.3981 29 1 -0.3633 -1.0278 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5137 0.8900 34 1 5.9123 2.0753 0.4315 35 1 5.8759 3.8916 0.4036 36 1 7.4118 3.5274 -1.9542 37 1 6.2585 4.8810 -1.8752 38 1 5.5385 3.2232 -4.0457 39 1 9.3906 6.7514 -8.0954 40 1 9.3381 6.8461 -10.5545 41 1 6.7036 5.8900 -12.5589 42 1 8.7640 3.8450 -12.5144 43 1 8.9812 6.7664 -14.3158 44 1 8.7895 8.0484 -12.2574 45 1 6.0912 4.0805 -10.5988 46 1 6.1399 3.9774 -8.1400 47 1 4.0013 4.6659 -1.3805 48 1 3.2544 3.1732 -2.0980 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_4549640.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:34:11 Heat of formation + Delta-G solvation = -266.170585 kcal Electronic energy + Delta-G solvation = -38555.478459 eV Core-core repulsion = 32743.571743 eV Total energy + Delta-G solvation = -5811.906716 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.137 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -50.94246 -48.94025 -48.91871 -41.83709 -41.46453 -41.10135 -39.38084 -39.14317 -37.55419 -37.26276 -36.11675 -32.72677 -32.31274 -32.23566 -30.79114 -28.61101 -27.12015 -26.51504 -25.88781 -24.48899 -23.79301 -22.81383 -22.44764 -22.35632 -20.77125 -20.52203 -20.08959 -19.74705 -18.74534 -18.45948 -17.99455 -17.80078 -17.61677 -17.39885 -17.11097 -17.08507 -16.64331 -16.52535 -16.27090 -16.14506 -15.98289 -15.78169 -15.54411 -15.39873 -15.37011 -15.16321 -15.14907 -14.88411 -14.76415 -14.65737 -14.44936 -14.39642 -14.15737 -13.97944 -13.69097 -13.50982 -13.38734 -13.08823 -13.03718 -12.93723 -12.68014 -12.51153 -12.45534 -12.15924 -11.90098 -11.80996 -11.60314 -11.54079 -11.48421 -11.44737 -10.68726 -10.47346 -10.20786 -9.59071 -4.98799 -0.01211 0.15895 0.38935 0.56642 1.05341 1.31254 1.56145 1.62213 1.65574 1.92686 1.97565 2.44642 2.63141 2.91091 3.05702 3.07056 3.17375 3.30125 3.48504 3.49735 3.57056 3.59764 3.73121 3.76726 3.93196 4.00980 4.09521 4.16653 4.23440 4.27473 4.32285 4.37932 4.48555 4.49419 4.58012 4.58975 4.68303 4.73601 4.83733 4.84772 4.85886 4.86405 4.92114 5.06483 5.09649 5.13501 5.30249 5.33120 5.41845 5.66516 5.82549 6.29806 6.64497 6.75960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.055 3.945 3 O -0.360 6.360 4 C 0.467 3.533 5 O -0.529 6.529 6 C -0.115 4.115 7 H 0.157 0.843 8 C -0.124 4.124 9 C 0.064 3.936 10 F -0.199 7.199 11 C 0.112 3.888 12 N -0.689 5.689 13 C 0.521 3.479 14 O -0.498 6.498 15 C 0.433 3.567 16 F -0.172 7.172 17 F -0.175 7.175 18 O -0.301 6.301 19 C 0.084 3.916 20 C -0.126 4.126 21 C -0.077 4.077 22 C -0.141 4.141 23 C -0.072 4.072 24 O -0.556 6.556 25 Si 0.777 3.223 26 C -0.061 4.061 27 C -0.199 4.199 28 C -0.126 4.126 29 H 0.095 0.905 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.063 0.937 33 H 0.067 0.933 34 H 0.080 0.920 35 H 0.158 0.842 36 H 0.089 0.911 37 H 0.129 0.871 38 H 0.419 0.581 39 H 0.156 0.844 40 H 0.162 0.838 41 H 0.109 0.891 42 H 0.396 0.604 43 H -0.299 1.299 44 H -0.281 1.281 45 H 0.139 0.861 46 H 0.133 0.867 47 H 0.157 0.843 48 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.085 2.429 3.184 4.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.018 4.018 3 O -0.277 6.277 4 C 0.310 3.690 5 O -0.418 6.418 6 C -0.133 4.133 7 H 0.175 0.825 8 C -0.162 4.162 9 C 0.045 3.955 10 F -0.180 7.180 11 C -0.010 4.010 12 N -0.343 5.343 13 C 0.299 3.701 14 O -0.372 6.372 15 C 0.355 3.645 16 F -0.153 7.153 17 F -0.156 7.156 18 O -0.218 6.218 19 C 0.041 3.959 20 C -0.145 4.145 21 C -0.095 4.095 22 C -0.142 4.142 23 C -0.182 4.182 24 O -0.364 6.364 25 Si 0.683 3.317 26 C -0.079 4.079 27 C -0.218 4.218 28 C -0.163 4.163 29 H 0.113 0.887 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.082 0.918 33 H 0.085 0.915 34 H 0.099 0.901 35 H 0.176 0.824 36 H 0.108 0.892 37 H 0.146 0.854 38 H 0.257 0.743 39 H 0.174 0.826 40 H 0.179 0.821 41 H 0.127 0.873 42 H 0.246 0.754 43 H -0.228 1.228 44 H -0.207 1.207 45 H 0.157 0.843 46 H 0.151 0.849 47 H 0.175 0.825 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -1.591 3.468 2.964 4.831 hybrid contribution -1.341 -1.465 -0.262 2.003 sum -2.932 2.003 2.702 4.462 Atomic orbital electron populations 1.21823 0.90573 1.04256 1.03815 1.23221 0.96950 0.79366 1.02277 1.86492 1.24173 1.33356 1.83629 1.23773 0.80672 0.92928 0.71590 1.90700 1.61057 1.44208 1.45802 1.22183 0.97797 0.90148 1.03214 0.82546 1.23651 0.93364 1.07102 0.92043 1.22517 0.98269 0.78912 0.95815 1.92910 1.97393 1.40329 1.87332 1.22235 1.00123 1.02227 0.76450 1.45632 1.35704 1.45196 1.07746 1.19230 0.83491 0.82326 0.85035 1.90864 1.32787 1.39097 1.74409 1.21796 0.75654 0.75137 0.91900 1.93194 1.38943 1.89609 1.93587 1.93199 1.94546 1.36842 1.91024 1.86633 1.53254 1.62091 1.19774 1.19263 0.97932 0.98718 0.79988 1.20679 0.99591 1.00050 0.94155 1.21115 0.97644 0.97969 0.92722 1.20513 0.97536 0.99264 0.96850 1.25188 1.09383 0.93215 0.90389 1.86471 1.44164 1.31082 1.74665 0.93703 0.85093 0.76181 0.76714 1.20945 0.97733 0.96810 0.92384 1.21651 1.00831 1.02816 0.96470 1.23786 0.94157 1.04325 0.94035 0.88661 0.91054 0.91231 0.91832 0.91469 0.90107 0.82378 0.89243 0.85353 0.74343 0.82642 0.82071 0.87318 0.75415 1.22758 1.20729 0.84285 0.84919 0.82544 0.89551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.57 10.29 71.98 0.74 1.31 16 2 C 0.06 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -0.95 10.22 -51.42 -0.53 -1.48 16 4 C 0.47 1.45 6.93 71.24 0.49 1.94 16 5 O -0.53 -5.50 14.47 21.98 0.32 -5.19 16 6 C -0.11 0.72 4.46 -10.95 -0.05 0.67 16 7 H 0.16 -1.88 8.14 -2.39 -0.02 -1.90 16 8 C -0.12 0.89 6.93 31.12 0.22 1.11 16 9 C 0.06 -0.31 1.63 -10.27 -0.02 -0.33 16 10 F -0.20 -0.81 15.18 44.97 0.68 -0.13 16 11 C 0.11 -0.66 5.35 86.38 0.46 -0.19 16 12 N -0.69 1.69 5.47 -463.06 -2.53 -0.84 16 13 C 0.52 1.86 7.34 87.66 0.64 2.51 16 14 O -0.50 -4.63 16.50 16.00 0.26 -4.37 16 15 C 0.43 1.98 2.05 71.24 0.15 2.12 16 16 F -0.17 -0.53 15.29 44.97 0.69 0.16 16 17 F -0.17 -0.79 15.29 44.97 0.69 -0.10 16 18 O -0.30 -2.35 9.60 -73.37 -0.70 -3.05 16 19 C 0.08 0.49 6.48 22.51 0.15 0.63 16 20 C -0.13 -0.24 9.99 22.37 0.22 -0.01 16 21 C -0.08 0.09 8.66 22.25 0.19 0.29 16 22 C -0.14 -0.05 5.39 -19.85 -0.11 -0.15 16 23 C -0.07 0.08 2.82 71.24 0.20 0.28 16 24 O -0.56 0.07 12.77 -148.98 -1.90 -1.83 16 25 Si 0.78 -2.45 29.78 68.60 2.04 -0.40 16 26 C -0.06 -0.16 9.60 22.25 0.21 0.06 16 27 C -0.20 -0.93 8.26 22.36 0.18 -0.74 16 28 C -0.13 1.16 7.12 31.18 0.22 1.39 16 29 H 0.09 -0.61 8.14 -2.38 -0.02 -0.63 16 30 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.06 0.15 8.13 -2.39 -0.02 0.13 16 33 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 34 H 0.08 -0.12 7.43 -2.39 -0.02 -0.14 16 35 H 0.16 -2.34 8.10 -2.39 -0.02 -2.36 16 36 H 0.09 -0.38 8.14 -2.38 -0.02 -0.39 16 37 H 0.13 -1.35 7.98 -2.39 -0.02 -1.37 16 38 H 0.42 -1.97 8.23 -92.71 -0.76 -2.73 16 39 H 0.16 -0.21 8.06 -2.91 -0.02 -0.23 16 40 H 0.16 -1.06 4.87 -2.91 -0.01 -1.07 16 41 H 0.11 -0.01 7.96 -2.39 -0.02 -0.02 16 42 H 0.40 -3.17 8.70 -74.06 -0.64 -3.82 16 43 H -0.30 -1.39 7.11 99.48 0.71 -0.68 16 44 H -0.28 -0.28 7.11 99.48 0.71 0.43 16 45 H 0.14 0.14 8.06 -2.91 -0.02 0.12 16 46 H 0.13 0.53 5.10 -2.91 -0.01 0.52 16 47 H 0.16 -2.48 7.99 -2.39 -0.02 -2.50 16 48 H 0.09 -0.62 8.09 -2.39 -0.02 -0.64 16 Total: 0.00 -26.73 415.83 3.05 -23.68 By element: Atomic # 1 Polarization: -17.50 SS G_CDS: -0.32 Total: -17.82 kcal Atomic # 6 Polarization: 7.01 SS G_CDS: 4.36 Total: 11.36 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -2.53 Total: -0.84 kcal Atomic # 8 Polarization: -13.36 SS G_CDS: -2.55 Total: -15.91 kcal Atomic # 9 Polarization: -2.12 SS G_CDS: 2.06 Total: -0.07 kcal Atomic # 14 Polarization: -2.45 SS G_CDS: 2.04 Total: -0.40 kcal Total: -26.73 3.05 -23.68 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_4549640.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -242.494 kcal (2) G-P(sol) polarization free energy of solvation -26.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -269.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -266.171 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds