Wall clock time and date at job start Sun Mar 7 2021 09:34:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45205 * 109.47333 * 2 1 4 4 C 1.34230 * 117.00122 * 180.02562 * 3 2 1 5 5 O 1.20820 * 119.99842 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99521 * 180.02562 * 4 3 2 7 7 H 1.08998 * 112.85197 * 48.80566 * 6 4 3 8 8 C 1.53787 * 113.60869 * 179.97438 * 6 4 3 9 9 C 1.53784 * 87.07923 * 139.98154 * 8 6 4 10 10 F 1.39895 * 113.61242 * 220.01912 * 9 8 6 11 11 C 1.52998 * 113.61395 * 89.11282 * 9 8 6 12 12 N 1.46504 * 109.47013 * 179.97438 * 11 9 8 13 13 C 1.34776 * 120.00069 * 179.97438 * 12 11 9 14 14 O 1.21288 * 120.00043 * 0.02562 * 13 12 11 15 15 C 1.50695 * 120.00149 * 180.02562 * 13 12 11 16 16 O 1.42904 * 109.47374 * 180.02562 * 15 13 12 17 17 C 1.35889 * 116.99924 * 179.97438 * 16 15 13 18 18 C 1.38758 * 120.02633 * 179.72134 * 17 16 15 19 19 C 1.50705 * 119.97227 * 0.02562 * 18 17 16 20 20 O 1.42901 * 109.46855 * 74.99934 * 19 18 17 21 21 Si 1.86296 * 109.47345 * 194.99803 * 19 18 17 22 22 C 1.38194 * 120.05701 * 179.77079 * 18 17 16 23 23 C 1.38156 * 120.10832 * 0.50876 * 22 18 17 24 24 C 1.38802 * 120.05342 * 359.74755 * 23 22 18 25 25 O 1.35896 * 120.02399 * 179.97438 * 24 23 22 26 26 C 1.42895 * 117.00334 * 0.02562 * 25 24 23 27 27 C 1.38613 * 119.94435 * 359.97438 * 24 23 22 28 28 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 29 29 H 1.09005 * 109.46371 * 299.99825 * 1 2 3 30 30 H 1.08996 * 109.47447 * 59.99776 * 1 2 3 31 31 H 1.09003 * 109.46561 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47032 * 240.00295 * 2 1 3 33 33 H 1.08999 * 109.47946 * 120.00209 * 2 1 3 34 34 H 1.09004 * 113.61202 * 254.52907 * 8 6 4 35 35 H 1.08994 * 113.61447 * 25.43338 * 8 6 4 36 36 H 1.09004 * 109.47533 * 300.00135 * 11 9 8 37 37 H 1.09004 * 109.47128 * 60.00451 * 11 9 8 38 38 H 0.96999 * 119.99633 * 0.02562 * 12 11 9 39 39 H 1.08999 * 109.47105 * 300.00088 * 15 13 12 40 40 H 1.08999 * 109.47392 * 60.00100 * 15 13 12 41 41 H 1.09004 * 109.47055 * 315.00218 * 19 18 17 42 42 H 0.96697 * 114.00159 * 59.99760 * 20 19 18 43 43 H 1.48491 * 110.00016 * 180.02562 * 21 19 18 44 44 H 1.48503 * 110.00219 * 301.32298 * 21 19 18 45 45 H 1.07996 * 119.94912 * 180.25452 * 22 18 17 46 46 H 1.07997 * 119.97664 * 179.72635 * 23 22 18 47 47 H 1.08997 * 109.47211 * 300.00269 * 26 25 24 48 48 H 1.09002 * 109.47144 * 60.00345 * 26 25 24 49 49 H 1.09003 * 109.46878 * 179.97438 * 26 25 24 50 50 H 1.07992 * 120.05140 * 180.02562 * 27 24 23 51 51 H 1.09006 * 113.61307 * 270.88660 * 28 9 8 52 52 H 1.08999 * 113.69146 * 139.99146 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.4715 3.5810 0.7564 8 6 5.4583 2.9681 -0.0001 9 6 5.3564 4.1429 -0.9872 10 9 6.3093 4.0992 -2.0105 11 6 5.2763 5.5106 -0.3060 12 7 5.1831 6.5590 -1.3251 13 6 5.1012 7.8525 -0.9556 14 8 5.1050 8.1487 0.2205 15 6 5.0048 8.9309 -2.0038 16 8 4.9300 10.2083 -1.3676 17 6 4.8385 11.2961 -2.1769 18 6 4.7567 12.5668 -1.6255 19 6 4.7698 12.7402 -0.1285 20 8 6.0974 12.5428 0.3621 21 14 4.1979 14.4600 0.3025 22 6 4.6684 13.6738 -2.4480 23 6 4.6508 13.5178 -3.8206 24 6 4.7271 12.2484 -4.3769 25 8 4.7092 12.0956 -5.7272 26 6 4.6107 13.2847 -6.5135 27 6 4.8215 11.1369 -3.5542 28 6 3.9862 3.5776 -1.3967 29 1 -0.3632 0.5138 0.8901 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3632 -1.0277 0.0005 32 1 1.8933 -0.5138 -0.8900 33 1 1.8935 -0.5138 0.8899 34 1 5.8895 3.2428 0.9626 35 1 5.9127 2.0753 -0.4294 36 1 4.3950 5.5465 0.3344 37 1 6.1704 5.6691 0.2971 38 1 5.1797 6.3220 -2.2657 39 1 5.8863 8.8952 -2.6439 40 1 4.1110 8.7723 -2.6072 41 1 4.1015 12.0100 0.3277 42 1 6.7471 13.1593 -0.0023 43 1 4.2069 14.6439 1.7759 44 1 5.0822 15.4654 -0.3399 45 1 4.6089 14.6623 -2.0171 46 1 4.5773 14.3841 -4.4613 47 1 3.6876 13.8086 -6.2658 48 1 5.4630 13.9309 -6.3032 49 1 4.6071 13.0215 -7.5712 50 1 4.8814 10.1485 -3.9852 51 1 4.0383 2.8512 -2.2078 52 1 3.2282 4.3431 -1.5621 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:34:29 Heat of formation + Delta-G solvation = -211.730534 kcal Electronic energy + Delta-G solvation = -37088.362488 eV Core-core repulsion = 31743.504610 eV Total energy + Delta-G solvation = -5344.857878 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.171 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -48.84442 -41.94626 -41.81137 -40.90159 -39.91747 -39.39203 -38.35876 -37.63017 -37.00151 -35.67476 -32.71694 -32.30887 -31.61809 -30.47626 -28.67958 -28.30695 -27.17480 -26.35837 -26.11970 -23.99072 -23.59306 -22.49122 -22.27267 -21.72959 -20.37111 -19.96603 -19.26897 -18.68703 -18.23418 -18.01955 -17.86526 -17.67656 -17.59108 -17.30506 -16.89947 -16.69198 -16.60745 -16.49101 -16.31164 -16.03479 -15.93044 -15.62744 -15.38455 -15.18799 -15.16192 -14.80629 -14.60642 -14.49298 -14.37435 -13.96831 -13.74879 -13.68140 -13.61634 -13.41136 -13.32971 -13.13418 -13.01120 -12.69260 -12.56883 -12.46785 -12.45514 -12.29666 -12.24083 -12.02373 -11.65237 -11.61736 -11.59902 -11.53426 -11.45488 -11.09564 -10.50206 -10.35256 -9.69544 -9.09711 -4.91595 0.20853 0.31431 0.99177 1.33275 1.34475 1.38635 1.55042 1.57177 1.97674 2.24170 2.49208 2.57632 2.84518 3.03794 3.05784 3.22777 3.42092 3.50926 3.55044 3.73000 3.81373 3.81700 3.95077 3.95809 4.01729 4.02811 4.07347 4.14799 4.17859 4.22437 4.29966 4.35267 4.41150 4.43109 4.45641 4.47568 4.53605 4.63767 4.66438 4.67686 4.76219 4.79703 4.82344 4.87981 5.03071 5.06924 5.11785 5.14246 5.24415 5.28731 5.39272 5.47711 6.10724 6.30248 6.39274 6.58353 6.59139 7.00623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.473 3.527 5 O -0.537 6.537 6 C -0.105 4.105 7 H 0.160 0.840 8 C -0.133 4.133 9 C 0.091 3.909 10 F -0.201 7.201 11 C 0.121 3.879 12 N -0.711 5.711 13 C 0.520 3.480 14 O -0.562 6.562 15 C 0.034 3.966 16 O -0.301 6.301 17 C 0.178 3.822 18 C -0.195 4.195 19 C -0.077 4.077 20 O -0.549 6.549 21 Si 0.780 3.220 22 C -0.041 4.041 23 C -0.238 4.238 24 C 0.164 3.836 25 O -0.330 6.330 26 C 0.016 3.984 27 C -0.252 4.252 28 C -0.127 4.127 29 H 0.068 0.932 30 H 0.070 0.930 31 H 0.095 0.905 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.109 0.891 35 H 0.100 0.900 36 H 0.107 0.893 37 H 0.079 0.921 38 H 0.420 0.580 39 H 0.117 0.883 40 H 0.128 0.872 41 H 0.100 0.900 42 H 0.381 0.619 43 H -0.308 1.308 44 H -0.264 1.264 45 H 0.155 0.845 46 H 0.157 0.843 47 H 0.071 0.929 48 H 0.066 0.934 49 H 0.116 0.884 50 H 0.153 0.847 51 H 0.101 0.899 52 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.759 2.346 -7.104 9.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.274 6.274 4 C 0.318 3.682 5 O -0.427 6.427 6 C -0.124 4.124 7 H 0.177 0.823 8 C -0.171 4.171 9 C 0.072 3.928 10 F -0.181 7.181 11 C -0.003 4.003 12 N -0.366 5.366 13 C 0.306 3.694 14 O -0.439 6.439 15 C -0.044 4.044 16 O -0.213 6.213 17 C 0.132 3.868 18 C -0.196 4.196 19 C -0.184 4.184 20 O -0.357 6.357 21 Si 0.684 3.316 22 C -0.059 4.059 23 C -0.257 4.257 24 C 0.118 3.882 25 O -0.243 6.243 26 C -0.078 4.078 27 C -0.271 4.271 28 C -0.165 4.165 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.114 0.886 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.128 0.872 35 H 0.118 0.882 36 H 0.125 0.875 37 H 0.098 0.902 38 H 0.257 0.743 39 H 0.135 0.865 40 H 0.146 0.854 41 H 0.118 0.882 42 H 0.230 0.770 43 H -0.237 1.237 44 H -0.190 1.190 45 H 0.172 0.828 46 H 0.174 0.826 47 H 0.089 0.911 48 H 0.085 0.915 49 H 0.134 0.866 50 H 0.171 0.829 51 H 0.119 0.881 52 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -5.624 2.308 -5.514 8.207 hybrid contribution 1.596 -0.850 -0.617 1.911 sum -4.028 1.458 -6.131 7.479 Atomic orbital electron populations 1.21829 0.90652 1.04274 1.03807 1.23270 0.96951 0.79265 1.02522 1.86521 1.24044 1.33532 1.83326 1.23802 0.80635 0.92670 0.71130 1.90687 1.61212 1.44178 1.46636 1.22479 0.96730 0.90660 1.02530 0.82269 1.23620 0.93945 0.97940 1.01591 1.22403 0.88041 0.95312 0.87051 1.92875 1.66626 1.97409 1.61190 1.21687 1.05036 0.82835 0.90779 1.45492 1.75100 1.04486 1.11560 1.20347 0.75870 0.83808 0.89408 1.90796 1.49787 1.82799 1.20516 1.22721 1.06661 0.80694 0.94335 1.86212 1.87740 1.13056 1.34325 1.18561 0.93403 0.86642 0.88241 1.19603 1.12433 0.90935 0.96629 1.25148 0.87009 1.14779 0.91491 1.86649 1.18476 1.60393 1.70185 0.94130 0.88683 0.71568 0.77201 1.20946 0.94130 0.98009 0.92816 1.21398 1.11335 0.96789 0.96130 1.18880 0.92695 0.93542 0.83091 1.86054 1.87638 1.36217 1.14437 1.23400 1.02577 0.86032 0.95790 1.20559 1.15581 1.00027 0.90931 1.23611 0.96329 1.01257 0.95270 0.91244 0.91117 0.88611 0.91339 0.91423 0.87243 0.88172 0.87488 0.90233 0.74256 0.86521 0.85441 0.88205 0.77039 1.23657 1.19040 0.82752 0.82592 0.91059 0.91528 0.86582 0.82908 0.88088 0.86166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.65 10.29 71.98 0.74 1.39 16 2 C 0.05 0.00 6.19 71.98 0.45 0.45 16 3 O -0.36 -0.70 10.22 -51.41 -0.53 -1.22 16 4 C 0.47 1.23 7.48 71.24 0.53 1.77 16 5 O -0.54 -5.09 15.65 21.98 0.34 -4.74 16 6 C -0.11 0.48 3.91 -11.01 -0.04 0.44 16 7 H 0.16 -1.49 7.66 -2.39 -0.02 -1.50 16 8 C -0.13 0.43 6.89 31.12 0.21 0.64 16 9 C 0.09 -0.41 1.83 -10.27 -0.02 -0.43 16 10 F -0.20 -0.04 16.82 44.97 0.76 0.72 16 11 C 0.12 -0.46 5.25 86.38 0.45 -0.01 16 12 N -0.71 2.72 5.47 -463.04 -2.53 0.19 16 13 C 0.52 1.54 7.91 87.66 0.69 2.23 16 14 O -0.56 -7.76 16.50 15.98 0.26 -7.49 16 15 C 0.03 -0.04 5.22 71.23 0.37 0.33 16 16 O -0.30 -2.18 8.99 -73.26 -0.66 -2.84 16 17 C 0.18 0.85 6.66 22.49 0.15 1.00 16 18 C -0.19 -0.72 5.27 -19.75 -0.10 -0.82 16 19 C -0.08 -0.41 2.37 71.24 0.17 -0.24 16 20 O -0.55 -5.16 12.88 -148.98 -1.92 -7.08 16 21 Si 0.78 0.16 30.25 68.60 2.08 2.24 16 22 C -0.04 0.02 8.65 22.24 0.19 0.22 16 23 C -0.24 0.32 9.04 22.39 0.20 0.52 16 24 C 0.16 0.21 6.68 22.49 0.15 0.36 16 25 O -0.33 -0.16 10.49 -92.39 -0.97 -1.13 16 26 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 27 C -0.25 -0.40 8.97 22.46 0.20 -0.20 16 28 C -0.13 0.86 7.08 31.12 0.22 1.08 16 29 H 0.07 -0.30 8.14 -2.38 -0.02 -0.31 16 30 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 31 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 32 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 33 H 0.07 0.05 8.13 -2.39 -0.02 0.03 16 34 H 0.11 -0.61 8.10 -2.39 -0.02 -0.63 16 35 H 0.10 0.09 7.43 -2.39 -0.02 0.08 16 36 H 0.11 -0.60 7.34 -2.39 -0.02 -0.62 16 37 H 0.08 -0.09 8.14 -2.38 -0.02 -0.11 16 38 H 0.42 -3.80 8.19 -92.71 -0.76 -4.55 16 39 H 0.12 -0.66 7.66 -2.39 -0.02 -0.68 16 40 H 0.13 -0.99 7.66 -2.39 -0.02 -1.01 16 41 H 0.10 0.80 7.82 -2.39 -0.02 0.78 16 42 H 0.38 0.80 8.70 -74.06 -0.64 0.15 16 43 H -0.31 -2.66 7.11 99.48 0.71 -1.95 16 44 H -0.26 -0.19 6.67 99.48 0.66 0.48 16 45 H 0.16 -0.72 4.85 -2.91 -0.01 -0.74 16 46 H 0.16 -1.00 6.29 -2.91 -0.02 -1.02 16 47 H 0.07 -0.63 7.66 -2.39 -0.02 -0.64 16 48 H 0.07 -0.54 7.66 -2.39 -0.02 -0.56 16 49 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 50 H 0.15 -0.42 6.30 -2.91 -0.02 -0.44 16 51 H 0.10 -0.52 8.09 -2.38 -0.02 -0.54 16 52 H 0.12 -1.28 8.10 -2.39 -0.02 -1.30 16 Total: 0.00 -30.95 437.07 2.10 -28.86 By element: Atomic # 1 Polarization: -16.81 SS G_CDS: -0.42 Total: -17.23 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: 5.68 Total: 9.73 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -2.53 Total: 0.19 kcal Atomic # 8 Polarization: -21.04 SS G_CDS: -3.47 Total: -24.50 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.76 Total: 0.72 kcal Atomic # 14 Polarization: 0.16 SS G_CDS: 2.08 Total: 2.24 kcal Total: -30.95 2.10 -28.86 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -182.875 kcal (2) G-P(sol) polarization free energy of solvation -30.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -211.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds