Wall clock time and date at job start Sun Mar 7 2021 09:34:59
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.52998 * 1
3 3 O 1.45201 * 109.47545 * 2 1
4 4 C 1.34224 * 117.00208 * 179.97438 * 3 2 1
5 5 O 1.20820 * 120.00068 * 359.97438 * 4 3 2
6 6 C 1.50701 * 120.00043 * 180.02562 * 4 3 2
7 7 H 1.09006 * 112.90805 * 311.25214 * 6 4 3
8 8 C 1.53782 * 113.61663 * 82.49910 * 6 4 3
9 9 C 1.53778 * 87.07961 * 139.98520 * 8 6 4
10 10 F 1.39909 * 113.68928 * 220.01279 * 9 8 6
11 11 C 1.52995 * 113.61645 * 89.12129 * 9 8 6
12 12 N 1.46503 * 109.47462 * 87.50326 * 11 9 8
13 13 C 1.34774 * 120.00269 * 180.02562 * 12 11 9
14 14 O 1.21702 * 119.99819 * 359.97438 * 13 12 11
15 15 C 1.46580 * 119.99996 * 179.97438 * 13 12 11
16 16 C 1.36652 * 125.45587 * 179.97438 * 15 13 12
17 17 C 1.37472 * 113.29217 * 180.02562 * 16 15 13
18 18 C 1.50706 * 122.44556 * 179.97438 * 17 16 15
19 19 C 1.33811 * 115.10387 * 0.26540 * 17 16 15
20 20 C 1.50699 * 124.52248 * 179.72807 * 19 17 16
21 21 O 1.42902 * 109.46907 * 30.00580 * 20 19 17
22 22 Si 1.86300 * 109.47270 * 150.00040 * 20 19 17
23 23 S 1.70615 * 110.95504 * 359.58927 * 19 17 16
24 24 C 1.53777 * 113.61658 * 179.97438 * 6 4 3
25 25 H 1.09001 * 109.47255 * 180.02562 * 1 2 3
26 26 H 1.09001 * 109.47147 * 300.00243 * 1 2 3
27 27 H 1.08992 * 109.47268 * 59.99913 * 1 2 3
28 28 H 1.09001 * 109.47147 * 239.99757 * 2 1 3
29 29 H 1.09006 * 109.47074 * 120.00277 * 2 1 3
30 30 H 1.09007 * 113.61209 * 25.43658 * 8 6 4
31 31 H 1.08996 * 113.61877 * 254.53702 * 8 6 4
32 32 H 1.09003 * 109.47071 * 327.50090 * 11 9 8
33 33 H 1.09004 * 109.47091 * 207.50046 * 11 9 8
34 34 H 0.97002 * 119.99582 * 359.97438 * 12 11 9
35 35 H 1.08000 * 123.34914 * 0.05026 * 16 15 13
36 36 H 1.09001 * 109.46953 * 90.02319 * 18 17 16
37 37 H 1.09000 * 109.47318 * 210.01917 * 18 17 16
38 38 H 1.09000 * 109.47161 * 330.02548 * 18 17 16
39 39 H 1.09001 * 109.48001 * 270.00329 * 20 19 17
40 40 H 0.96703 * 114.00189 * 59.99614 * 21 20 19
41 41 H 1.48506 * 109.99959 * 58.68370 * 22 20 19
42 42 H 1.48492 * 110.00585 * 180.02562 * 22 20 19
43 43 H 1.09005 * 113.61291 * 105.46718 * 24 6 4
44 44 H 1.08999 * 113.69361 * 334.58071 * 24 6 4
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 8 2.0141 1.3689 0.0000
4 6 3.3448 1.5448 0.0005
5 8 4.0807 0.5866 0.0015
6 6 3.9208 2.9373 0.0012
7 1 3.4715 3.5827 -0.7537
8 6 3.9859 3.5765 1.3983
9 6 5.3562 4.1421 0.9896
10 9 6.3100 4.0987 2.0122
11 6 5.2763 5.5102 0.3094
12 7 5.3027 6.5639 1.3269
13 6 5.2423 7.8587 0.9580
14 8 5.1663 8.1528 -0.2205
15 6 5.2681 8.9129 1.9762
16 6 5.2136 10.2557 1.7286
17 6 5.2556 11.0210 2.8698
18 6 5.2090 12.5270 2.8355
19 6 5.3471 10.3314 4.0128
20 6 5.4135 10.9546 5.3833
21 8 4.7009 12.1932 5.3783
22 14 4.6449 9.8010 6.6280
23 16 5.3747 8.6522 3.7118
24 6 5.4583 2.9680 0.0024
25 1 -0.3634 -1.0277 0.0005
26 1 -0.3633 0.5139 0.8900
27 1 -0.3633 0.5138 -0.8899
28 1 1.8933 -0.5139 -0.8900
29 1 1.8933 -0.5139 0.8900
30 1 4.0377 2.8496 2.2090
31 1 3.2287 4.3430 1.5636
32 1 4.3500 5.5790 -0.2609
33 1 6.1263 5.6323 -0.3621
34 1 5.3629 6.3295 2.2663
35 1 5.1441 10.6739 0.7353
36 1 4.1722 12.8596 2.8858
37 1 5.7606 12.9271 3.6862
38 1 5.6604 12.8835 1.9096
39 1 6.4547 11.1355 5.6502
40 1 3.7654 12.1079 5.1486
41 1 5.3570 8.4979 6.6203
42 1 4.7035 10.4043 7.9836
43 1 5.8903 3.2431 -0.9599
44 1 5.9139 2.0754 0.4310
There are 63 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 63
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990)
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
s_22_16501616_6739946.mol2 44
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 09:34:59
Heat of formation + Delta-G solvation = -145.312994 kcal
Electronic energy + Delta-G solvation = -29142.817975 eV
Core-core repulsion = 24682.894427 eV
Total energy + Delta-G solvation = -4459.923548 eV
No. of doubly occupied orbitals = 63
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 358.113 amu
Computer time = 1.01 seconds
Orbital eigenvalues (eV)
-48.89641 -41.89495 -40.92361 -39.96048 -39.42015 -37.55147 -37.37124 -35.63106
-32.79273 -32.31535 -30.29058 -29.81298 -27.39479 -27.13608 -25.77806 -24.37009
-23.92586 -22.28206 -21.81663 -20.65368 -20.12707 -19.40342 -19.20731 -18.13830
-17.82149 -17.65513 -17.47655 -17.03352 -16.73124 -16.62647 -16.39925 -16.09525
-16.02314 -15.61308 -15.35662 -14.96447 -14.87484 -14.67254 -14.48726 -14.34886
-14.07198 -14.00254 -13.77747 -13.68685 -13.51319 -13.12404 -13.06800 -12.98826
-12.80894 -12.64091 -12.55276 -12.48317 -12.32059 -12.23894 -11.79529 -11.67325
-11.58417 -11.42112 -11.18021 -10.76221 -10.38058 -9.71576 -9.48067 -5.22072
-0.66261 0.24705 0.67167 1.04380 1.05410 1.29178 1.43598 1.51678
1.79648 1.80405 2.11643 2.70344 2.89049 2.93448 3.08946 3.20417
3.33239 3.51125 3.67614 3.74591 3.89685 3.94117 3.95961 4.06773
4.08109 4.21767 4.23803 4.30036 4.38599 4.39425 4.40580 4.51462
4.55833 4.58890 4.67953 4.75242 4.77489 4.83288 4.93676 4.97217
5.00832 5.08940 5.36028 5.38675 5.43340 6.20007 6.34536 6.65372
6.97877
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.154 4.154
2 C 0.061 3.939
3 O -0.355 6.355
4 C 0.475 3.525
5 O -0.501 6.501
6 C -0.109 4.109
7 H 0.136 0.864
8 C -0.136 4.136
9 C 0.081 3.919
10 F -0.188 7.188
11 C 0.120 3.880
12 N -0.727 5.727
13 C 0.596 3.404
14 O -0.523 6.523
15 C -0.265 4.265
16 C -0.043 4.043
17 C -0.092 4.092
18 C -0.096 4.096
19 C -0.235 4.235
20 C -0.028 4.028
21 O -0.529 6.529
22 Si 0.658 3.342
23 S 0.197 5.803
24 C -0.128 4.128
25 H 0.082 0.918
26 H 0.068 0.932
27 H 0.068 0.932
28 H 0.072 0.928
29 H 0.071 0.929
30 H 0.106 0.894
31 H 0.100 0.900
32 H 0.097 0.903
33 H 0.091 0.909
34 H 0.403 0.597
35 H 0.156 0.844
36 H 0.073 0.927
37 H 0.085 0.915
38 H 0.062 0.938
39 H 0.125 0.875
40 H 0.381 0.619
41 H -0.236 1.236
42 H -0.234 1.234
43 H 0.098 0.902
44 H 0.118 0.882
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -4.932 -0.190 1.821 5.261
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.211 4.211
2 C -0.013 4.013
3 O -0.271 6.271
4 C 0.317 3.683
5 O -0.388 6.388
6 C -0.128 4.128
7 H 0.154 0.846
8 C -0.174 4.174
9 C 0.063 3.937
10 F -0.168 7.168
11 C -0.004 4.004
12 N -0.380 5.380
13 C 0.383 3.617
14 O -0.400 6.400
15 C -0.385 4.385
16 C -0.076 4.076
17 C -0.104 4.104
18 C -0.154 4.154
19 C -0.354 4.354
20 C -0.141 4.141
21 O -0.335 6.335
22 Si 0.558 3.442
23 S 0.465 5.535
24 C -0.166 4.166
25 H 0.101 0.899
26 H 0.087 0.913
27 H 0.087 0.913
28 H 0.090 0.910
29 H 0.090 0.910
30 H 0.124 0.876
31 H 0.118 0.882
32 H 0.115 0.885
33 H 0.109 0.891
34 H 0.239 0.761
35 H 0.174 0.826
36 H 0.091 0.909
37 H 0.103 0.897
38 H 0.081 0.919
39 H 0.142 0.858
40 H 0.229 0.771
41 H -0.161 1.161
42 H -0.157 1.157
43 H 0.117 0.883
44 H 0.136 0.864
Dipole moment (debyes) X Y Z Total
from point charges -3.972 -1.885 2.834 5.231
hybrid contribution 0.550 1.050 -0.754 1.405
sum -3.422 -0.835 2.080 4.091
Atomic orbital electron populations
1.21825 0.92219 1.03337 1.03715 1.23117 0.95686 0.79641 1.02845
1.86507 1.24077 1.32945 1.83611 1.23190 0.80846 0.91877 0.72396
1.90703 1.60535 1.42747 1.44825 1.22327 0.97203 0.92101 1.01182
0.84621 1.23645 0.96516 1.01165 0.96087 1.22473 0.87952 0.95765
0.87537 1.92896 1.65901 1.97349 1.60701 1.21690 1.05049 0.82870
0.90779 1.45648 1.76351 1.05326 1.10653 1.16884 0.76108 0.81279
0.87438 1.90872 1.49363 1.82408 1.17348 1.24479 1.18981 0.97869
0.97159 1.20744 0.95889 0.90627 1.00377 1.18723 1.02773 0.98500
0.90435 1.20650 1.02982 0.88529 1.03274 1.24492 1.11497 0.98466
1.00971 1.24471 1.01117 0.92456 0.96006 1.86535 1.26430 1.28159
1.92371 0.94841 0.90936 0.78393 0.80079 1.83115 1.68751 1.02913
0.98740 1.23621 0.93545 0.98514 1.00948 0.89939 0.91333 0.91301
0.90983 0.91033 0.87551 0.88183 0.88491 0.89079 0.76138 0.82643
0.90880 0.89654 0.91898 0.85834 0.77090 1.16066 1.15705 0.88303
0.86403
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.15 0.34 10.29 37.16 0.38 0.72 16
2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16
3 O -0.35 -0.26 10.22 -39.24 -0.40 -0.66 16
4 C 0.47 0.45 7.48 36.01 0.27 0.72 16
5 O -0.50 -1.98 15.65 -18.75 -0.29 -2.27 16
6 C -0.11 0.23 3.91 -90.96 -0.36 -0.12 16
7 H 0.14 -0.57 7.72 -51.93 -0.40 -0.97 16
8 C -0.14 0.37 7.06 -25.92 -0.18 0.19 16
9 C 0.08 -0.15 1.91 -89.83 -0.17 -0.32 16
10 F -0.19 -0.10 16.61 2.25 0.04 -0.07 16
11 C 0.12 -0.17 5.27 -4.04 -0.02 -0.20 16
12 N -0.73 0.17 5.45 -61.65 -0.34 -0.17 16
13 C 0.60 1.34 7.78 -12.90 -0.10 1.24 16
14 O -0.52 -2.86 16.84 5.19 0.09 -2.77 16
15 C -0.26 -0.31 6.45 -36.79 -0.24 -0.54 16
16 C -0.04 -0.04 9.80 -40.43 -0.40 -0.44 16
17 C -0.09 0.00 5.75 -106.45 -0.61 -0.61 16
18 C -0.10 0.10 8.69 36.01 0.31 0.42 16
19 C -0.23 0.15 5.53 -35.86 -0.20 -0.05 16
20 C -0.03 0.04 2.76 36.01 0.10 0.14 16
21 O -0.53 0.89 9.85 -35.23 -0.35 0.54 16
22 Si 0.66 -1.40 31.31 -169.99 -5.32 -6.72 16
23 S 0.20 -0.15 19.78 -107.50 -2.13 -2.28 16
24 C -0.13 0.23 6.88 -25.94 -0.18 0.05 16
25 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16
26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16
27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16
28 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16
29 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16
30 H 0.11 -0.24 8.09 -51.93 -0.42 -0.66 16
31 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16
32 H 0.10 -0.24 7.39 -51.93 -0.38 -0.62 16
33 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16
34 H 0.40 -0.58 7.14 -40.82 -0.29 -0.87 16
35 H 0.16 0.14 8.06 -52.49 -0.42 -0.29 16
36 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16
37 H 0.08 -0.03 6.39 -51.93 -0.33 -0.36 16
38 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16
39 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16
40 H 0.38 -1.93 8.66 45.56 0.39 -1.53 16
41 H -0.24 0.09 7.09 56.52 0.40 0.49 16
42 H -0.23 -0.17 7.11 56.52 0.40 0.23 16
43 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16
44 H 0.12 -0.03 7.44 -51.93 -0.39 -0.42 16
LS Contribution 385.82 15.07 5.81 5.81
Total: 0.00 -8.46 385.82 -10.12 -18.58
By element:
Atomic # 1 Polarization: -5.34 SS G_CDS: -6.08 Total: -11.41 kcal
Atomic # 6 Polarization: 2.57 SS G_CDS: -1.16 Total: 1.41 kcal
Atomic # 7 Polarization: 0.17 SS G_CDS: -0.34 Total: -0.17 kcal
Atomic # 8 Polarization: -4.21 SS G_CDS: -0.95 Total: -5.16 kcal
Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.07 kcal
Atomic # 14 Polarization: -1.40 SS G_CDS: -5.32 Total: -6.72 kcal
Atomic # 16 Polarization: -0.15 SS G_CDS: -2.13 Total: -2.28 kcal
Total LS contribution 5.81 Total: 5.81 kcal
Total: -8.46 -10.12 -18.58 kcal
The number of atoms in the molecule is 44
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_16501616_6739946.mol2 44
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -126.730 kcal
(2) G-P(sol) polarization free energy of solvation -8.460 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.189 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.124 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.583 kcal
(6) G-S(sol) free energy of system = (1) + (5) -145.313 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.01 seconds