Wall clock time and date at job start Sun Mar 7 2021 09:35:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45205 * 109.46944 * 2 1 4 4 C 1.34228 * 116.99712 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99977 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99851 * 180.02562 * 4 3 2 7 7 H 1.09005 * 112.85085 * 48.79880 * 6 4 3 8 8 C 1.53774 * 113.61751 * 180.02562 * 6 4 3 9 9 C 1.53783 * 87.08322 * 89.19858 * 8 6 4 10 10 F 1.39900 * 113.61440 * 270.80286 * 9 8 6 11 11 C 1.52992 * 113.61363 * 139.98256 * 9 8 6 12 12 N 1.46505 * 109.47094 * 181.52666 * 11 9 8 13 13 C 1.34777 * 120.00038 * 179.97438 * 12 11 9 14 14 O 1.21619 * 120.00126 * 0.02562 * 13 12 11 15 15 C 1.47269 * 119.99699 * 180.02562 * 13 12 11 16 16 C 1.36769 * 126.93755 * 180.02562 * 15 13 12 17 17 C 1.50696 * 125.80433 * 0.02562 * 16 15 13 18 18 N 1.34664 * 108.39351 * 180.02562 * 16 15 13 19 19 C 1.36442 * 110.29493 * 359.97438 * 18 16 15 20 20 C 1.50707 * 125.56897 * 179.97438 * 19 18 16 21 21 O 1.42903 * 109.46442 * 65.00348 * 20 19 18 22 22 Si 1.86293 * 109.47256 * 184.99914 * 20 19 18 23 23 C 1.34484 * 108.86093 * 0.26635 * 19 18 16 24 24 C 1.53781 * 87.16983 * 25.39019 * 9 8 6 25 25 H 1.08999 * 109.47006 * 59.99823 * 1 2 3 26 26 H 1.09001 * 109.47125 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47314 * 299.99867 * 1 2 3 28 28 H 1.08997 * 109.47314 * 240.00133 * 2 1 3 29 29 H 1.08999 * 109.47006 * 120.00177 * 2 1 3 30 30 H 1.09008 * 113.61218 * 334.64671 * 8 6 4 31 31 H 1.08997 * 113.61472 * 203.75035 * 8 6 4 32 32 H 1.09002 * 109.46968 * 61.53284 * 11 9 8 33 33 H 1.08998 * 109.47564 * 301.52772 * 11 9 8 34 34 H 0.96997 * 119.99454 * 0.02562 * 12 11 9 35 35 H 1.08997 * 109.47434 * 269.98130 * 17 16 15 36 36 H 1.09002 * 109.47163 * 29.98469 * 17 16 15 37 37 H 1.09002 * 109.46849 * 149.97551 * 17 16 15 38 38 H 0.96992 * 124.84713 * 180.02562 * 18 16 15 39 39 H 1.08999 * 109.47345 * 305.00418 * 20 19 18 40 40 H 0.96700 * 114.00311 * 60.00230 * 21 20 19 41 41 H 1.48506 * 109.99973 * 180.02562 * 22 20 19 42 42 H 1.48493 * 110.00375 * 301.32185 * 22 20 19 43 43 H 1.08001 * 126.83318 * 179.73734 * 23 19 18 44 44 H 1.08999 * 113.60836 * 89.16000 * 24 9 8 45 45 H 1.08999 * 113.61251 * 220.05801 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9375 0.0012 7 1 3.4708 3.5813 0.7570 8 6 5.4581 2.9682 0.0011 9 6 5.3802 2.9459 -1.5346 10 9 5.3596 1.6561 -2.0760 11 6 6.4031 3.8589 -2.2134 12 7 6.2255 3.7959 -3.6663 13 6 7.0213 4.5238 -4.4747 14 8 7.8871 5.2326 -3.9981 15 6 6.8423 4.4609 -5.9351 16 6 7.5647 5.1341 -6.8814 17 6 8.7018 6.0853 -6.6109 18 7 7.0870 4.8025 -8.0961 19 6 6.0563 3.9169 -7.9736 20 6 5.2726 3.3207 -9.1145 21 8 6.1329 2.4970 -9.9041 22 14 3.8762 2.2903 -8.4372 23 6 5.8498 3.6679 -6.6683 24 6 3.9854 3.5786 -1.3970 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8934 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 5.9127 2.0743 0.4283 31 1 5.8764 3.8907 0.4037 32 1 7.4102 3.5307 -1.9560 33 1 6.2571 4.8842 -1.8737 34 1 5.5348 3.2309 -4.0464 35 1 8.3107 7.0964 -6.4978 36 1 9.2133 5.7890 -5.6951 37 1 9.4040 6.0583 -7.4442 38 1 7.4276 5.1439 -8.9376 39 1 4.8667 4.1207 -9.7337 40 1 6.5306 1.7627 -9.4166 41 1 3.0960 1.6962 -9.5524 42 1 4.4146 1.2153 -7.5656 43 1 5.1031 3.0128 -6.2444 44 1 4.0004 4.6683 -1.3774 45 1 3.2528 3.1769 -2.0970 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_9865296.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:35:19 Heat of formation + Delta-G solvation = -133.424502 kcal Electronic energy + Delta-G solvation = -30076.064573 eV Core-core repulsion = 25590.304532 eV Total energy + Delta-G solvation = -4485.760041 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.152 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.77202 -42.47490 -41.69946 -40.11604 -39.09285 -37.92977 -37.32410 -35.45609 -32.92629 -32.72215 -32.27798 -29.89877 -28.93724 -27.24367 -26.39257 -25.33024 -23.91329 -22.98006 -22.27040 -21.48611 -20.84265 -20.37226 -19.24091 -18.65823 -17.84129 -17.47407 -17.34010 -17.28289 -16.96396 -16.83125 -16.60514 -16.20232 -15.82880 -15.70450 -15.35546 -15.16326 -14.99562 -14.79213 -14.64140 -14.40710 -14.19277 -13.97445 -13.93754 -13.79985 -13.57382 -13.44669 -13.40819 -13.10127 -13.01032 -12.89138 -12.67455 -12.48490 -12.25336 -11.93611 -11.60722 -11.50037 -11.48853 -11.34949 -10.92728 -10.73067 -10.10467 -9.86564 -9.18455 -5.02690 0.77620 1.07748 1.19039 1.20045 1.55897 1.58171 1.81835 2.05468 2.40747 2.62785 2.86036 3.03153 3.20883 3.22831 3.24944 3.45224 3.51116 3.80579 3.84178 3.96053 4.00889 4.05968 4.15511 4.23420 4.27177 4.30221 4.33512 4.35732 4.45927 4.51429 4.60255 4.63073 4.67812 4.70012 4.75554 4.77684 4.80514 4.93743 5.01601 5.07312 5.18478 5.46939 5.48976 5.65347 5.85206 6.24590 6.36104 6.62599 6.78801 7.41701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.062 3.938 3 O -0.356 6.356 4 C 0.475 3.525 5 O -0.490 6.490 6 C -0.114 4.114 7 H 0.126 0.874 8 C -0.132 4.132 9 C 0.077 3.923 10 F -0.176 7.176 11 C 0.116 3.884 12 N -0.726 5.726 13 C 0.596 3.404 14 O -0.547 6.547 15 C -0.237 4.237 16 C 0.123 3.877 17 C -0.099 4.099 18 N -0.535 5.535 19 C -0.012 4.012 20 C -0.056 4.056 21 O -0.534 6.534 22 Si 0.710 3.290 23 C -0.157 4.157 24 C -0.136 4.136 25 H 0.068 0.932 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.101 0.899 31 H 0.120 0.880 32 H 0.082 0.918 33 H 0.092 0.908 34 H 0.403 0.597 35 H 0.082 0.918 36 H 0.103 0.897 37 H 0.066 0.934 38 H 0.419 0.581 39 H 0.118 0.882 40 H 0.380 0.620 41 H -0.254 1.254 42 H -0.254 1.254 43 H 0.149 0.851 44 H 0.121 0.879 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.539 2.984 0.345 5.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.012 4.012 3 O -0.273 6.273 4 C 0.316 3.684 5 O -0.376 6.376 6 C -0.133 4.133 7 H 0.144 0.856 8 C -0.170 4.170 9 C 0.058 3.942 10 F -0.156 7.156 11 C -0.008 4.008 12 N -0.378 5.378 13 C 0.386 3.614 14 O -0.426 6.426 15 C -0.246 4.246 16 C 0.003 3.997 17 C -0.156 4.156 18 N -0.131 5.131 19 C -0.121 4.121 20 C -0.165 4.165 21 O -0.341 6.341 22 Si 0.609 3.391 23 C -0.181 4.181 24 C -0.173 4.173 25 H 0.087 0.913 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.120 0.880 31 H 0.138 0.862 32 H 0.100 0.900 33 H 0.110 0.890 34 H 0.238 0.762 35 H 0.100 0.900 36 H 0.122 0.878 37 H 0.084 0.916 38 H 0.256 0.744 39 H 0.136 0.864 40 H 0.228 0.772 41 H -0.179 1.179 42 H -0.178 1.178 43 H 0.166 0.834 44 H 0.139 0.861 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -4.232 2.763 0.127 5.056 hybrid contribution 0.809 -1.050 -0.815 1.556 sum -3.423 1.713 -0.688 3.889 Atomic orbital electron populations 1.21821 0.92296 1.03266 1.03659 1.23086 0.95558 0.79712 1.02812 1.86478 1.24065 1.32831 1.83927 1.22915 0.80885 0.91694 0.72898 1.90715 1.60378 1.42580 1.43912 1.22037 0.97633 0.91955 1.01670 0.85634 1.23548 0.93530 1.06140 0.93797 1.22197 0.97095 0.80075 0.94815 1.92937 1.97247 1.38584 1.86831 1.21737 0.99108 0.99697 0.80255 1.45579 1.37957 1.48288 1.06017 1.17262 0.80349 0.78688 0.85120 1.90760 1.34033 1.41034 1.76748 1.19930 1.04097 1.08577 0.92015 1.20450 0.97282 0.98270 0.83685 1.20645 0.93748 0.97138 1.04092 1.41586 1.27649 1.35672 1.08181 1.20714 0.95637 0.99672 0.96093 1.24812 0.99068 0.98952 0.93710 1.86594 1.63975 1.44161 1.39346 0.94492 0.80510 0.82066 0.82036 1.21778 1.01289 1.03541 0.91528 1.23666 0.96131 1.02567 0.94963 0.91333 0.90007 0.91368 0.91049 0.91099 0.88007 0.86211 0.89986 0.89022 0.76227 0.89988 0.87816 0.91551 0.74358 0.86430 0.77202 1.17904 1.17840 0.83365 0.86067 0.89011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.66 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.52 10.22 -39.25 -0.40 -0.92 16 4 C 0.47 0.89 6.93 36.01 0.25 1.14 16 5 O -0.49 -2.46 14.49 -18.75 -0.27 -2.73 16 6 C -0.11 0.19 4.46 -90.87 -0.40 -0.22 16 7 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 8 C -0.13 0.24 6.93 -25.92 -0.18 0.06 16 9 C 0.08 -0.06 1.63 -89.81 -0.15 -0.21 16 10 F -0.18 -0.49 15.19 2.25 0.03 -0.45 16 11 C 0.12 -0.06 5.35 -4.04 -0.02 -0.08 16 12 N -0.73 -0.42 5.47 -61.43 -0.34 -0.75 16 13 C 0.60 1.79 7.81 -12.59 -0.10 1.69 16 14 O -0.55 -3.11 14.81 5.26 0.08 -3.03 16 15 C -0.24 -0.47 6.29 -103.35 -0.65 -1.12 16 16 C 0.12 0.14 7.17 -81.88 -0.59 -0.45 16 17 C -0.10 -0.01 9.88 36.00 0.36 0.35 16 18 N -0.54 0.24 5.90 -5.42 -0.03 0.21 16 19 C -0.01 0.00 6.47 -81.86 -0.53 -0.53 16 20 C -0.06 0.07 3.08 36.01 0.11 0.18 16 21 O -0.53 -0.12 12.88 -35.23 -0.45 -0.58 16 22 Si 0.71 -1.36 30.57 -169.99 -5.20 -6.55 16 23 C -0.16 -0.01 9.03 -37.50 -0.34 -0.35 16 24 C -0.14 0.38 7.12 -25.83 -0.18 0.19 16 25 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 30 H 0.10 0.02 7.43 -51.92 -0.39 -0.37 16 31 H 0.12 -0.54 8.10 -51.93 -0.42 -0.96 16 32 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.09 -0.15 7.98 -51.93 -0.41 -0.56 16 34 H 0.40 -0.30 7.35 -40.82 -0.30 -0.60 16 35 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.10 0.21 6.47 -51.93 -0.34 -0.13 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.42 -1.01 8.96 -40.82 -0.37 -1.37 16 39 H 0.12 -0.26 7.96 -51.93 -0.41 -0.68 16 40 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 41 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 42 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 43 H 0.15 -0.28 5.87 -52.49 -0.31 -0.59 16 44 H 0.12 -0.60 7.99 -51.93 -0.41 -1.01 16 45 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 LS Contribution 380.55 15.07 5.73 5.73 Total: 0.00 -10.16 380.55 -9.04 -19.20 By element: Atomic # 1 Polarization: -5.32 SS G_CDS: -6.38 Total: -11.71 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: -1.81 Total: 1.57 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.37 Total: -0.54 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -1.05 Total: -7.25 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.03 Total: -0.45 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.20 Total: -6.55 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -10.16 -9.04 -19.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_9865296.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.222 kcal (2) G-P(sol) polarization free energy of solvation -10.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.202 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds