Wall clock time and date at job start Sun Mar 7 2021 09:35:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45205 * 109.46944 * 2 1 4 4 C 1.34228 * 116.99712 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99977 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99851 * 180.02562 * 4 3 2 7 7 H 1.09005 * 112.85085 * 48.79880 * 6 4 3 8 8 C 1.53774 * 113.61751 * 180.02562 * 6 4 3 9 9 C 1.53783 * 87.08322 * 89.19858 * 8 6 4 10 10 F 1.39900 * 113.61440 * 270.80286 * 9 8 6 11 11 C 1.52992 * 113.61363 * 139.98256 * 9 8 6 12 12 N 1.46505 * 109.47094 * 181.52666 * 11 9 8 13 13 C 1.34777 * 120.00038 * 179.97438 * 12 11 9 14 14 O 1.21619 * 120.00126 * 0.02562 * 13 12 11 15 15 C 1.47269 * 119.99699 * 180.02562 * 13 12 11 16 16 C 1.36769 * 126.93755 * 180.02562 * 15 13 12 17 17 C 1.50696 * 125.80433 * 0.02562 * 16 15 13 18 18 N 1.34664 * 108.39351 * 180.02562 * 16 15 13 19 19 C 1.36442 * 110.29493 * 359.97438 * 18 16 15 20 20 C 1.50707 * 125.56897 * 179.97438 * 19 18 16 21 21 O 1.42903 * 109.46442 * 65.00348 * 20 19 18 22 22 Si 1.86293 * 109.47256 * 184.99914 * 20 19 18 23 23 C 1.34484 * 108.86093 * 0.26635 * 19 18 16 24 24 C 1.53781 * 87.16983 * 25.39019 * 9 8 6 25 25 H 1.08999 * 109.47006 * 59.99823 * 1 2 3 26 26 H 1.09001 * 109.47125 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47314 * 299.99867 * 1 2 3 28 28 H 1.08997 * 109.47314 * 240.00133 * 2 1 3 29 29 H 1.08999 * 109.47006 * 120.00177 * 2 1 3 30 30 H 1.09008 * 113.61218 * 334.64671 * 8 6 4 31 31 H 1.08997 * 113.61472 * 203.75035 * 8 6 4 32 32 H 1.09002 * 109.46968 * 61.53284 * 11 9 8 33 33 H 1.08998 * 109.47564 * 301.52772 * 11 9 8 34 34 H 0.96997 * 119.99454 * 0.02562 * 12 11 9 35 35 H 1.08997 * 109.47434 * 269.98130 * 17 16 15 36 36 H 1.09002 * 109.47163 * 29.98469 * 17 16 15 37 37 H 1.09002 * 109.46849 * 149.97551 * 17 16 15 38 38 H 0.96992 * 124.84713 * 180.02562 * 18 16 15 39 39 H 1.08999 * 109.47345 * 305.00418 * 20 19 18 40 40 H 0.96700 * 114.00311 * 60.00230 * 21 20 19 41 41 H 1.48506 * 109.99973 * 180.02562 * 22 20 19 42 42 H 1.48493 * 110.00375 * 301.32185 * 22 20 19 43 43 H 1.08001 * 126.83318 * 179.73734 * 23 19 18 44 44 H 1.08999 * 113.60836 * 89.16000 * 24 9 8 45 45 H 1.08999 * 113.61251 * 220.05801 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9375 0.0012 7 1 3.4708 3.5813 0.7570 8 6 5.4581 2.9682 0.0011 9 6 5.3802 2.9459 -1.5346 10 9 5.3596 1.6561 -2.0760 11 6 6.4031 3.8589 -2.2134 12 7 6.2255 3.7959 -3.6663 13 6 7.0213 4.5238 -4.4747 14 8 7.8871 5.2326 -3.9981 15 6 6.8423 4.4609 -5.9351 16 6 7.5647 5.1341 -6.8814 17 6 8.7018 6.0853 -6.6109 18 7 7.0870 4.8025 -8.0961 19 6 6.0563 3.9169 -7.9736 20 6 5.2726 3.3207 -9.1145 21 8 6.1329 2.4970 -9.9041 22 14 3.8762 2.2903 -8.4372 23 6 5.8498 3.6679 -6.6683 24 6 3.9854 3.5786 -1.3970 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8934 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 5.9127 2.0743 0.4283 31 1 5.8764 3.8907 0.4037 32 1 7.4102 3.5307 -1.9560 33 1 6.2571 4.8842 -1.8737 34 1 5.5348 3.2309 -4.0464 35 1 8.3107 7.0964 -6.4978 36 1 9.2133 5.7890 -5.6951 37 1 9.4040 6.0583 -7.4442 38 1 7.4276 5.1439 -8.9376 39 1 4.8667 4.1207 -9.7337 40 1 6.5306 1.7627 -9.4166 41 1 3.0960 1.6962 -9.5524 42 1 4.4146 1.2153 -7.5656 43 1 5.1031 3.0128 -6.2444 44 1 4.0004 4.6683 -1.3774 45 1 3.2528 3.1769 -2.0970 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_9865296.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:35:18 Heat of formation + Delta-G solvation = -134.581395 kcal Electronic energy + Delta-G solvation = -30076.114740 eV Core-core repulsion = 25590.304532 eV Total energy + Delta-G solvation = -4485.810208 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.152 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -48.83247 -42.48194 -41.77958 -40.24505 -39.06872 -37.90104 -37.47015 -35.56412 -32.92421 -32.69352 -32.29765 -29.88650 -28.91030 -27.06136 -26.38699 -25.31884 -23.87978 -23.02732 -22.28905 -21.46299 -20.89273 -20.38089 -19.22816 -18.71328 -17.89702 -17.48337 -17.38067 -17.31217 -16.97320 -16.85393 -16.58398 -16.21706 -15.88793 -15.72933 -15.36671 -15.16693 -15.03350 -14.77086 -14.67289 -14.45828 -14.21600 -13.98235 -13.86286 -13.81987 -13.53710 -13.38531 -13.30464 -13.02643 -13.00904 -12.89180 -12.60717 -12.45583 -12.24963 -11.94962 -11.57990 -11.53958 -11.46365 -11.36884 -10.92667 -10.85818 -10.22067 -9.86996 -9.20763 -4.90314 0.68228 1.09374 1.14285 1.25221 1.59608 1.64564 1.88310 2.06681 2.43682 2.49250 2.99999 3.14830 3.27642 3.35238 3.36938 3.53487 3.57125 3.85428 3.87002 3.96653 4.04698 4.05765 4.18356 4.31153 4.37130 4.42159 4.43323 4.49253 4.64330 4.65460 4.69446 4.71219 4.73423 4.76752 4.87603 4.89679 4.90450 4.95591 5.13258 5.15549 5.20774 5.42263 5.45184 5.63975 5.84134 6.38205 6.42850 6.56494 6.68687 7.27987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.055 3.945 3 O -0.358 6.358 4 C 0.469 3.531 5 O -0.530 6.530 6 C -0.114 4.114 7 H 0.156 0.844 8 C -0.129 4.129 9 C 0.066 3.934 10 F -0.201 7.201 11 C 0.118 3.882 12 N -0.719 5.719 13 C 0.591 3.409 14 O -0.581 6.581 15 C -0.261 4.261 16 C 0.115 3.885 17 C -0.095 4.095 18 N -0.528 5.528 19 C -0.010 4.010 20 C -0.059 4.059 21 O -0.550 6.550 22 Si 0.790 3.210 23 C -0.160 4.160 24 C -0.121 4.121 25 H 0.071 0.929 26 H 0.094 0.906 27 H 0.070 0.930 28 H 0.064 0.936 29 H 0.065 0.935 30 H 0.076 0.924 31 H 0.152 0.848 32 H 0.066 0.934 33 H 0.110 0.890 34 H 0.409 0.591 35 H 0.087 0.913 36 H 0.082 0.918 37 H 0.084 0.916 38 H 0.428 0.572 39 H 0.132 0.868 40 H 0.388 0.612 41 H -0.297 1.297 42 H -0.283 1.283 43 H 0.164 0.836 44 H 0.153 0.847 45 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.601 4.333 0.159 7.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.019 4.019 3 O -0.275 6.275 4 C 0.313 3.687 5 O -0.419 6.419 6 C -0.133 4.133 7 H 0.173 0.827 8 C -0.166 4.166 9 C 0.047 3.953 10 F -0.181 7.181 11 C -0.006 4.006 12 N -0.370 5.370 13 C 0.382 3.618 14 O -0.463 6.463 15 C -0.271 4.271 16 C -0.005 4.005 17 C -0.152 4.152 18 N -0.125 5.125 19 C -0.120 4.120 20 C -0.168 4.168 21 O -0.358 6.358 22 Si 0.693 3.307 23 C -0.184 4.184 24 C -0.158 4.158 25 H 0.090 0.910 26 H 0.113 0.887 27 H 0.089 0.911 28 H 0.082 0.918 29 H 0.084 0.916 30 H 0.095 0.905 31 H 0.170 0.830 32 H 0.084 0.916 33 H 0.128 0.872 34 H 0.245 0.755 35 H 0.105 0.895 36 H 0.101 0.899 37 H 0.103 0.897 38 H 0.268 0.732 39 H 0.149 0.851 40 H 0.238 0.762 41 H -0.225 1.225 42 H -0.209 1.209 43 H 0.182 0.818 44 H 0.171 0.829 45 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -5.316 4.117 -0.060 6.725 hybrid contribution 1.139 -1.544 -0.782 2.072 sum -4.177 2.573 -0.842 4.978 Atomic orbital electron populations 1.21819 0.90477 1.04217 1.03896 1.23223 0.97005 0.79402 1.02223 1.86492 1.24037 1.33305 1.83629 1.23726 0.80683 0.92818 0.71521 1.90697 1.61124 1.44214 1.45883 1.22173 0.97505 0.90213 1.03375 0.82662 1.23641 0.93581 1.06579 0.92823 1.22477 0.98547 0.78946 0.95331 1.92885 1.97426 1.40539 1.87296 1.21795 0.98466 1.00644 0.79646 1.45556 1.37448 1.47557 1.06434 1.17492 0.80093 0.78473 0.85778 1.90735 1.35506 1.42678 1.77387 1.20068 1.05333 1.09856 0.91796 1.20613 0.97430 0.98336 0.84138 1.20592 0.93769 0.97092 1.03769 1.41594 1.27381 1.35309 1.08178 1.20853 0.95538 0.99375 0.96189 1.24995 0.98798 0.99360 0.93642 1.86572 1.64355 1.44729 1.40193 0.93549 0.78109 0.80077 0.78970 1.21974 1.01327 1.03528 0.91591 1.23719 0.94185 1.04060 0.93812 0.91024 0.88731 0.91103 0.91804 0.91634 0.90479 0.82985 0.91594 0.87237 0.75499 0.89478 0.89935 0.89728 0.73243 0.85076 0.76235 1.22492 1.20910 0.81847 0.82938 0.89201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.55 10.29 71.98 0.74 1.29 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.19 10.22 -51.40 -0.53 -1.71 16 4 C 0.47 2.09 6.93 71.24 0.49 2.58 16 5 O -0.53 -6.34 14.49 21.97 0.32 -6.03 16 6 C -0.11 0.48 4.46 -10.96 -0.05 0.43 16 7 H 0.16 -1.57 8.14 -2.38 -0.02 -1.59 16 8 C -0.13 0.49 6.93 31.12 0.22 0.71 16 9 C 0.07 -0.10 1.63 -10.27 -0.02 -0.12 16 10 F -0.20 -1.41 15.19 44.97 0.68 -0.72 16 11 C 0.12 -0.09 5.35 86.38 0.46 0.37 16 12 N -0.72 -1.15 5.47 -466.53 -2.55 -3.71 16 13 C 0.59 4.06 7.81 86.62 0.68 4.74 16 14 O -0.58 -7.38 14.81 -4.09 -0.06 -7.44 16 15 C -0.26 -1.15 6.29 -19.04 -0.12 -1.27 16 16 C 0.12 0.28 7.17 41.78 0.30 0.58 16 17 C -0.09 -0.06 9.88 71.23 0.70 0.64 16 18 N -0.53 0.75 5.90 -171.07 -1.01 -0.26 16 19 C -0.01 0.01 6.47 40.98 0.27 0.28 16 20 C -0.06 0.20 3.08 71.24 0.22 0.42 16 21 O -0.55 0.03 12.88 -148.98 -1.92 -1.88 16 22 Si 0.79 -3.20 30.57 68.60 2.10 -1.11 16 23 C -0.16 0.01 9.03 23.62 0.21 0.22 16 24 C -0.12 0.84 7.12 31.18 0.22 1.06 16 25 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 26 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 27 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 28 H 0.06 0.17 8.13 -2.39 -0.02 0.15 16 29 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 30 H 0.08 0.14 7.43 -2.38 -0.02 0.12 16 31 H 0.15 -1.64 8.10 -2.39 -0.02 -1.66 16 32 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 33 H 0.11 -0.47 7.98 -2.39 -0.02 -0.49 16 34 H 0.41 -0.48 7.35 -92.71 -0.68 -1.16 16 35 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.08 0.46 6.47 -2.39 -0.02 0.44 16 37 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 38 H 0.43 -2.41 8.96 -92.71 -0.83 -3.24 16 39 H 0.13 -0.78 7.96 -2.39 -0.02 -0.80 16 40 H 0.39 -1.73 8.70 -74.06 -0.64 -2.37 16 41 H -0.30 -0.97 7.11 99.48 0.71 -0.26 16 42 H -0.28 -0.19 7.11 99.48 0.71 0.51 16 43 H 0.16 -0.69 5.87 -2.91 -0.02 -0.71 16 44 H 0.15 -1.99 7.99 -2.39 -0.02 -2.01 16 45 H 0.09 -0.53 8.10 -2.39 -0.02 -0.55 16 Total: 0.00 -26.07 380.55 0.74 -25.33 By element: Atomic # 1 Polarization: -13.88 SS G_CDS: -1.06 Total: -14.95 kcal Atomic # 6 Polarization: 7.70 SS G_CDS: 4.77 Total: 12.47 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -3.56 Total: -3.97 kcal Atomic # 8 Polarization: -14.88 SS G_CDS: -2.19 Total: -17.06 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 0.68 Total: -0.72 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.10 Total: -1.11 kcal Total: -26.07 0.74 -25.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_9865296.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.247 kcal (2) G-P(sol) polarization free energy of solvation -26.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds