Wall clock time and date at job start Sun Mar 7 2021 05:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35531 * 125.67898 * 2 1 4 4 C 1.35454 * 108.87303 * 180.02562 * 3 2 1 5 5 C 1.50698 * 126.07109 * 180.02562 * 4 3 2 6 6 O 1.42897 * 109.47126 * 244.97483 * 5 4 3 7 7 Si 1.86307 * 109.46848 * 4.97405 * 5 4 3 8 8 C 1.39846 * 107.86313 * 359.73973 * 4 3 2 9 9 C 1.37656 * 125.67674 * 180.02562 * 2 1 3 10 10 C 1.46683 * 126.23109 * 359.97438 * 9 2 1 11 11 O 1.21687 * 120.00288 * 5.20720 * 10 9 2 12 12 N 1.34775 * 119.99588 * 185.20659 * 10 9 2 13 13 C 1.46504 * 119.99856 * 174.47648 * 12 10 9 14 14 H 1.08998 * 112.84916 * 334.66902 * 13 12 10 15 15 C 1.53779 * 113.61216 * 105.86285 * 13 12 10 16 16 C 1.54053 * 86.98534 * 89.16221 * 15 13 12 17 17 H 1.08994 * 113.69263 * 270.87224 * 16 15 13 18 18 C 1.52998 * 113.62006 * 139.97348 * 16 15 13 19 19 O 1.42902 * 109.47125 * 87.50572 * 18 16 15 20 20 C 1.35900 * 117.00517 * 180.02562 * 19 18 16 21 21 C 1.38738 * 120.05073 * 359.72532 * 20 19 18 22 22 C 1.38144 * 119.93968 * 179.74365 * 21 20 19 23 23 C 1.38271 * 120.05769 * 0.51025 * 22 21 20 24 24 C 1.38265 * 120.11042 * 359.76890 * 23 22 21 25 25 C 1.38147 * 120.05436 * 359.97184 * 24 23 22 26 26 C 1.53777 * 113.61362 * 203.47052 * 13 12 10 27 27 H 1.08997 * 109.47105 * 271.91751 * 1 2 3 28 28 H 1.09000 * 109.46799 * 31.92301 * 1 2 3 29 29 H 1.09008 * 109.47082 * 151.91996 * 1 2 3 30 30 H 1.07998 * 125.56390 * 0.05220 * 3 2 1 31 31 H 1.08998 * 109.47018 * 124.97155 * 5 4 3 32 32 H 0.96699 * 114.00145 * 60.00053 * 6 5 4 33 33 H 1.48495 * 110.00076 * 58.67981 * 7 5 4 34 34 H 1.48502 * 109.99632 * 180.02562 * 7 5 4 35 35 H 1.07998 * 126.45812 * 180.30574 * 8 4 3 36 36 H 0.97001 * 120.00638 * 354.20115 * 12 10 9 37 37 H 1.08999 * 113.61242 * 203.66084 * 15 13 12 38 38 H 1.08996 * 113.61771 * 334.57106 * 15 13 12 39 39 H 1.09002 * 109.47743 * 207.50556 * 18 16 15 40 40 H 1.08999 * 109.47439 * 327.50778 * 18 16 15 41 41 H 1.07992 * 120.02752 * 359.97438 * 21 20 19 42 42 H 1.07995 * 119.97225 * 180.27751 * 22 21 20 43 43 H 1.08000 * 119.94395 * 179.74388 * 23 22 21 44 44 H 1.08000 * 119.97121 * 180.02562 * 24 23 22 45 45 H 1.08001 * 120.02544 * 180.02562 * 25 24 23 46 46 H 1.09001 * 113.61540 * 25.43461 * 26 13 12 47 47 H 1.09005 * 113.61384 * 156.33769 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7093 -0.0006 5 6 4.7537 1.6188 -0.0002 6 8 5.4772 1.4527 -1.2213 7 14 4.1927 3.3887 0.1534 8 6 3.5780 -0.6889 0.0051 9 6 2.2678 -1.1182 -0.0005 10 6 1.8123 -2.5125 -0.0006 11 8 0.6257 -2.7650 -0.0959 12 7 2.7080 -3.5140 0.1048 13 6 2.2470 -4.8993 0.2266 14 1 1.2461 -4.9765 0.6513 15 6 2.4378 -5.7269 -1.0553 16 6 3.8351 -6.0885 -0.5168 17 1 4.6133 -5.3839 -0.8101 18 6 4.2293 -7.5459 -0.7644 19 8 4.8455 -7.6611 -2.0486 20 6 5.2574 -8.8998 -2.4265 21 6 5.0773 -9.9813 -1.5763 22 6 5.4921 -11.2404 -1.9649 23 6 6.0958 -11.4215 -3.1956 24 6 6.2816 -10.3443 -4.0423 25 6 5.8638 -9.0841 -3.6605 26 6 3.2719 -5.8334 0.8912 27 1 -0.3633 0.0344 1.0271 28 1 -0.3633 0.8723 -0.5434 29 1 -0.3634 -0.9068 -0.4838 30 1 1.9082 2.1235 0.0008 31 1 5.3991 1.3678 0.8415 32 1 4.9634 1.6590 -2.0141 33 1 3.4118 3.5673 1.4038 34 1 5.3685 4.2958 0.1543 35 1 4.4583 -1.3145 0.0108 36 1 3.6580 -3.3181 0.0960 37 1 1.7638 -6.5804 -1.1283 38 1 2.4608 -5.1254 -1.9640 39 1 4.9304 -7.8686 0.0053 40 1 3.3389 -8.1738 -0.7311 41 1 4.6100 -9.8395 -0.6131 42 1 5.3481 -12.0833 -1.3054 43 1 6.4231 -12.4060 -3.4959 44 1 6.7530 -10.4884 -5.0032 45 1 6.0088 -8.2431 -4.3224 46 1 3.9679 -5.3178 1.5530 47 1 2.8255 -6.7160 1.3495 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534226_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:38 Heat of formation + Delta-G solvation = 5.221628 kcal Electronic energy + Delta-G solvation = -28628.605841 eV Core-core repulsion = 24552.315694 eV Total energy + Delta-G solvation = -4076.290147 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.58881 -41.38770 -40.73295 -39.28943 -38.09675 -37.64567 -34.89651 -33.71328 -32.03684 -31.29651 -30.72098 -29.03388 -28.27777 -26.76144 -25.77543 -24.84841 -23.81151 -23.27648 -22.54375 -21.34892 -20.65017 -20.20488 -19.18896 -18.83991 -17.83640 -17.32703 -16.95466 -16.92539 -16.78804 -16.73983 -16.59353 -15.93432 -15.67410 -15.61632 -15.34167 -15.14777 -15.01424 -14.77963 -14.44764 -14.35084 -14.08293 -14.05356 -13.58108 -13.51359 -13.44377 -13.25296 -13.17669 -13.09601 -12.51260 -12.27704 -12.11914 -12.06422 -11.93751 -11.72933 -11.63572 -11.22014 -11.18727 -10.30340 -10.23038 -9.97515 -9.72099 -9.28230 -9.18376 -4.94733 0.36320 0.37024 0.47398 1.41787 1.50976 1.54563 1.73404 2.04460 2.17287 2.23939 2.26889 2.82852 3.37892 3.49470 3.61177 3.70456 3.75971 3.78412 3.83457 3.89866 3.97291 4.03376 4.21538 4.23606 4.28015 4.31404 4.35511 4.39015 4.42174 4.49126 4.54979 4.62341 4.65712 4.70144 4.72308 4.73396 4.75543 4.80716 4.98210 5.01284 5.06509 5.11798 5.18329 5.33666 5.46387 5.49612 5.59502 5.65722 5.84794 5.86320 6.15510 6.39755 6.45553 6.90052 7.05594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.412 5.412 3 C 0.037 3.963 4 C -0.220 4.220 5 C -0.037 4.037 6 O -0.561 6.561 7 Si 0.780 3.220 8 C -0.112 4.112 9 C -0.080 4.080 10 C 0.590 3.410 11 O -0.581 6.581 12 N -0.692 5.692 13 C 0.118 3.882 14 H 0.092 0.908 15 C -0.145 4.145 16 C -0.104 4.104 17 H 0.100 0.900 18 C 0.065 3.935 19 O -0.331 6.331 20 C 0.112 3.888 21 C -0.218 4.218 22 C -0.089 4.089 23 C -0.169 4.169 24 C -0.087 4.087 25 C -0.174 4.174 26 C -0.118 4.118 27 H 0.081 0.919 28 H 0.116 0.884 29 H 0.087 0.913 30 H 0.204 0.796 31 H 0.101 0.899 32 H 0.393 0.607 33 H -0.283 1.283 34 H -0.305 1.305 35 H 0.154 0.846 36 H 0.414 0.586 37 H 0.098 0.902 38 H 0.058 0.942 39 H 0.076 0.924 40 H 0.073 0.927 41 H 0.142 0.858 42 H 0.144 0.856 43 H 0.141 0.859 44 H 0.146 0.854 45 H 0.130 0.870 46 H 0.093 0.907 47 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.730 0.192 0.615 0.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.084 5.084 3 C -0.100 4.100 4 C -0.227 4.227 5 C -0.148 4.148 6 O -0.368 6.368 7 Si 0.686 3.314 8 C -0.139 4.139 9 C -0.193 4.193 10 C 0.379 3.621 11 O -0.463 6.463 12 N -0.343 5.343 13 C 0.013 3.987 14 H 0.110 0.890 15 C -0.184 4.184 16 C -0.122 4.122 17 H 0.118 0.882 18 C -0.010 4.010 19 O -0.245 6.245 20 C 0.066 3.934 21 C -0.237 4.237 22 C -0.107 4.107 23 C -0.187 4.187 24 C -0.105 4.105 25 C -0.193 4.193 26 C -0.156 4.156 27 H 0.099 0.901 28 H 0.134 0.866 29 H 0.105 0.895 30 H 0.220 0.780 31 H 0.119 0.881 32 H 0.243 0.757 33 H -0.210 1.210 34 H -0.233 1.233 35 H 0.172 0.828 36 H 0.251 0.749 37 H 0.116 0.884 38 H 0.077 0.923 39 H 0.094 0.906 40 H 0.091 0.909 41 H 0.160 0.840 42 H 0.162 0.838 43 H 0.159 0.841 44 H 0.164 0.836 45 H 0.148 0.852 46 H 0.111 0.889 47 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -1.485 0.697 1.361 2.131 hybrid contribution 0.566 -0.578 0.360 0.886 sum -0.919 0.119 1.720 1.954 Atomic orbital electron populations 1.22481 0.74804 1.06282 1.04620 1.44033 1.07667 1.04758 1.51897 1.22357 0.89693 0.92561 1.05402 1.19907 0.94296 0.94701 1.13768 1.24478 0.92466 1.08381 0.89459 1.86444 1.42158 1.92189 1.16038 0.93977 0.80299 0.72426 0.84715 1.21414 0.94235 0.95324 1.02918 1.20024 0.90971 0.87542 1.20769 1.17180 0.85279 0.84257 0.75364 1.90766 1.17756 1.85320 1.52423 1.45254 1.10033 1.05294 1.73689 1.21848 0.99401 0.79768 0.97684 0.88969 1.23561 0.97000 1.00218 0.97599 1.22643 0.97120 0.94908 0.97548 0.88159 1.23020 0.97462 0.97820 0.82652 1.86055 1.74150 1.26948 1.37346 1.19263 0.95278 0.84371 0.94446 1.21509 1.07475 0.93246 1.01455 1.21320 0.95786 0.96915 0.96631 1.21428 1.02184 1.00030 0.95068 1.21296 0.97424 0.91461 1.00324 1.20706 1.03842 0.99066 0.95672 1.23291 0.97401 0.99747 0.95154 0.90066 0.86551 0.89462 0.77994 0.88121 0.75744 1.21002 1.23273 0.82793 0.74862 0.88399 0.92320 0.90634 0.90920 0.83999 0.83837 0.84101 0.83594 0.85166 0.88891 0.86539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.08 10.69 127.77 1.37 1.29 16 2 N -0.41 -0.77 3.16 -534.30 -1.69 -2.46 16 3 C 0.04 -0.07 9.94 83.48 0.83 0.76 16 4 C -0.22 -0.04 5.43 -20.12 -0.11 -0.15 16 5 C -0.04 0.03 3.02 71.24 0.22 0.24 16 6 O -0.56 -0.27 12.88 -148.98 -1.92 -2.19 16 7 Si 0.78 -2.59 30.60 68.60 2.10 -0.49 16 8 C -0.11 -0.21 10.29 22.57 0.23 0.02 16 9 C -0.08 -0.35 6.89 40.35 0.28 -0.08 16 10 C 0.59 3.81 7.77 86.45 0.67 4.48 16 11 O -0.58 -7.33 14.28 -4.31 -0.06 -7.39 16 12 N -0.69 -0.37 5.25 -444.00 -2.33 -2.70 16 13 C 0.12 -0.08 4.26 45.51 0.19 0.11 16 14 H 0.09 0.23 7.57 -2.39 -0.02 0.22 16 15 C -0.15 0.06 7.45 31.21 0.23 0.29 16 16 C -0.10 0.34 3.90 -10.18 -0.04 0.30 16 17 H 0.10 -0.27 8.14 -2.39 -0.02 -0.29 16 18 C 0.07 -0.11 4.58 71.98 0.33 0.22 16 19 O -0.33 -1.69 10.14 -92.42 -0.94 -2.62 16 20 C 0.11 0.62 6.69 22.51 0.15 0.78 16 21 C -0.22 -0.55 9.04 22.37 0.20 -0.35 16 22 C -0.09 -0.12 10.04 22.26 0.22 0.11 16 23 C -0.17 -0.25 10.04 22.28 0.22 -0.02 16 24 C -0.09 -0.21 10.04 22.25 0.22 0.01 16 25 C -0.17 -0.90 9.99 22.37 0.22 -0.68 16 26 C -0.12 0.73 7.38 31.12 0.23 0.96 16 27 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 29 H 0.09 0.31 6.11 -2.38 -0.01 0.29 16 30 H 0.20 -1.80 6.21 -2.91 -0.02 -1.82 16 31 H 0.10 0.08 7.96 -2.39 -0.02 0.06 16 32 H 0.39 -2.85 8.70 -74.06 -0.64 -3.49 16 33 H -0.28 -0.30 7.11 99.48 0.71 0.41 16 34 H -0.30 -1.50 7.11 99.48 0.71 -0.80 16 35 H 0.15 -0.21 7.45 -2.91 -0.02 -0.23 16 36 H 0.41 -1.56 7.61 -92.71 -0.71 -2.26 16 37 H 0.10 -0.13 7.90 -2.39 -0.02 -0.15 16 38 H 0.06 0.20 8.14 -2.39 -0.02 0.19 16 39 H 0.08 -0.30 7.65 -2.39 -0.02 -0.32 16 40 H 0.07 -0.24 7.38 -2.39 -0.02 -0.26 16 41 H 0.14 -0.25 6.30 -2.91 -0.02 -0.27 16 42 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 43 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 44 H 0.15 -0.30 8.06 -2.91 -0.02 -0.32 16 45 H 0.13 0.50 8.06 -2.91 -0.02 0.47 16 46 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 47 H 0.12 -1.03 8.10 -2.38 -0.02 -1.05 16 Total: 0.00 -22.47 389.83 0.53 -21.95 By element: Atomic # 1 Polarization: -12.08 SS G_CDS: -0.31 Total: -12.39 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: 5.68 Total: 8.30 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -4.02 Total: -5.15 kcal Atomic # 8 Polarization: -9.29 SS G_CDS: -2.92 Total: -12.21 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: 2.10 Total: -0.49 kcal Total: -22.47 0.53 -21.95 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534226_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.167 kcal (2) G-P(sol) polarization free energy of solvation -22.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.945 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds