Wall clock time and date at job start Sun Mar 7 2021 05:11:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.47061 * 2 1 4 4 C 1.50698 * 109.46915 * 240.00143 * 2 1 3 5 5 C 1.38629 * 119.94103 * 74.97618 * 4 2 1 6 6 F 1.35097 * 119.88556 * 359.97438 * 5 4 2 7 7 C 1.38681 * 120.23734 * 180.02562 * 5 4 2 8 8 C 1.37819 * 120.11708 * 359.67228 * 7 5 4 9 9 C 1.39668 * 119.87867 * 0.62761 * 8 7 5 10 10 C 1.47727 * 120.11337 * 179.67502 * 9 8 7 11 11 O 1.21570 * 119.99348 * 179.72552 * 10 9 8 12 12 N 1.34769 * 120.00356 * 359.71849 * 10 9 8 13 13 C 1.46501 * 120.00014 * 179.97438 * 12 10 9 14 14 H 1.09004 * 112.85074 * 336.20143 * 13 12 10 15 15 C 1.53782 * 113.61142 * 107.50467 * 13 12 10 16 16 C 1.53962 * 87.11063 * 89.18830 * 15 13 12 17 17 H 1.08993 * 113.61598 * 270.84305 * 16 15 13 18 18 C 1.52999 * 113.66529 * 139.88900 * 16 15 13 19 19 O 1.42904 * 109.47219 * 87.55249 * 18 16 15 20 20 C 1.35896 * 116.99838 * 180.02562 * 19 18 16 21 21 C 1.38732 * 120.06035 * 359.72451 * 20 19 18 22 22 C 1.38148 * 119.94534 * 179.74636 * 21 20 19 23 23 C 1.38262 * 120.05463 * 0.51053 * 22 21 20 24 24 C 1.38269 * 120.11138 * 359.76184 * 23 22 21 25 25 C 1.38141 * 120.05797 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61619 * 205.00312 * 13 12 10 27 27 C 1.37857 * 119.93632 * 254.99718 * 4 2 1 28 28 H 0.96693 * 114.00191 * 59.99644 * 1 2 3 29 29 H 1.09000 * 109.47346 * 120.00148 * 2 1 3 30 30 H 1.48501 * 110.00273 * 60.00125 * 3 2 1 31 31 H 1.48503 * 110.00201 * 181.32097 * 3 2 1 32 32 H 1.08004 * 119.94344 * 180.02562 * 7 5 4 33 33 H 1.08006 * 120.05917 * 180.32360 * 8 7 5 34 34 H 0.97001 * 120.00013 * 0.02562 * 12 10 9 35 35 H 1.08997 * 113.61668 * 203.66381 * 15 13 12 36 36 H 1.08998 * 113.61674 * 334.48890 * 15 13 12 37 37 H 1.09002 * 109.47053 * 207.55709 * 18 16 15 38 38 H 1.09004 * 109.47121 * 327.55345 * 18 16 15 39 39 H 1.08004 * 120.02355 * 359.97438 * 21 20 19 40 40 H 1.07998 * 119.97182 * 180.27673 * 22 21 20 41 41 H 1.07997 * 119.94497 * 179.74802 * 23 22 21 42 42 H 1.08002 * 119.96712 * 179.97438 * 24 23 22 43 43 H 1.07993 * 120.03402 * 180.02562 * 25 24 23 44 44 H 1.09002 * 113.61445 * 25.43587 * 26 13 12 45 45 H 1.09002 * 113.61408 * 156.25317 * 26 13 12 46 46 H 1.07993 * 120.06479 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.8683 -0.0836 -2.4654 6 9 1.3561 1.1627 -2.5624 7 6 2.3283 -0.7319 -3.6018 8 6 2.8571 -2.0011 -3.5077 9 6 2.9171 -2.6396 -2.2670 10 6 3.4762 -4.0029 -2.1613 11 8 3.5320 -4.5547 -1.0794 12 7 3.9243 -4.6349 -3.2640 13 6 4.4792 -5.9867 -3.1590 14 1 4.8569 -6.2129 -2.1618 15 6 3.5589 -7.0767 -3.7332 16 6 4.2540 -6.8411 -5.0866 17 1 3.7794 -6.0695 -5.6927 18 6 4.5283 -8.1275 -5.8682 19 8 3.3888 -8.4516 -6.6674 20 6 3.4684 -9.5745 -7.4286 21 6 4.6216 -10.3455 -7.4113 22 6 4.6979 -11.4894 -8.1821 23 6 3.6302 -11.8604 -8.9784 24 6 2.4819 -11.0906 -9.0017 25 6 2.3985 -9.9488 -8.2287 26 6 5.4659 -6.3368 -4.2854 27 6 2.4522 -1.9825 -1.1260 28 1 -0.3933 0.4417 -0.7649 29 1 1.7924 -0.5138 0.8900 30 1 1.5616 2.4680 1.2085 31 1 3.5347 1.7704 -0.0322 32 1 2.2774 -0.2390 -4.5615 33 1 3.2198 -2.5031 -4.3926 34 1 3.8800 -4.1945 -4.1271 35 1 3.7421 -8.0670 -3.3163 36 1 2.5036 -6.8041 -3.7286 37 1 5.3952 -7.9830 -6.5130 38 1 4.7261 -8.9413 -5.1706 39 1 5.4576 -10.0536 -6.7929 40 1 5.5938 -12.0924 -8.1656 41 1 3.6934 -12.7528 -9.5834 42 1 1.6494 -11.3823 -9.6249 43 1 1.5012 -9.3481 -8.2468 44 1 5.9502 -5.4662 -4.7279 45 1 6.1714 -7.1238 -4.0190 46 1 2.5001 -2.4701 -0.1636 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534226_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:11:53 Heat of formation + Delta-G solvation = -60.569262 kcal Electronic energy + Delta-G solvation = -30044.278352 eV Core-core repulsion = 25588.418712 eV Total energy + Delta-G solvation = -4455.859641 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.36796 -41.76331 -41.08822 -40.24836 -39.21040 -38.09282 -37.70409 -34.81219 -32.86300 -32.09762 -31.88312 -30.98303 -29.09688 -27.02634 -26.74448 -25.49545 -24.19445 -23.54982 -23.33800 -22.55497 -21.72363 -20.38775 -19.33587 -19.11671 -18.70240 -17.92071 -17.83842 -17.34745 -17.03171 -16.91066 -16.87011 -16.68014 -16.28398 -16.17708 -15.71117 -15.54061 -15.40417 -15.10045 -15.06279 -14.74021 -14.45957 -14.34423 -14.23515 -14.09738 -14.01543 -13.56297 -13.48869 -13.40090 -13.13173 -12.92811 -12.50801 -12.49976 -12.11672 -12.05705 -12.00435 -11.71970 -11.61966 -11.28636 -11.19328 -10.71420 -10.28206 -10.13931 -9.96784 -9.86309 -9.17502 -4.93382 -0.55033 -0.02239 0.37769 0.48168 1.13808 1.47468 1.57287 1.83612 1.93401 2.18963 2.51217 2.83600 2.90798 3.24144 3.39530 3.47933 3.50265 3.53067 3.57636 3.76851 3.79478 3.90375 3.92810 3.98345 4.06534 4.22834 4.24661 4.29245 4.33000 4.43388 4.49898 4.55695 4.59048 4.65561 4.71389 4.72846 4.74918 4.80637 4.85823 4.96397 4.99193 5.02214 5.05854 5.07457 5.12397 5.34208 5.47160 5.50249 5.58368 5.60402 5.85294 6.36978 6.46202 6.56243 7.04345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.075 4.075 3 Si 0.747 3.253 4 C -0.166 4.166 5 C 0.122 3.878 6 F -0.099 7.099 7 C -0.141 4.141 8 C -0.042 4.042 9 C -0.156 4.156 10 C 0.561 3.439 11 O -0.579 6.579 12 N -0.692 5.692 13 C 0.112 3.888 14 H 0.088 0.912 15 C -0.148 4.148 16 C -0.101 4.101 17 H 0.108 0.892 18 C 0.064 3.936 19 O -0.329 6.329 20 C 0.113 3.887 21 C -0.219 4.219 22 C -0.089 4.089 23 C -0.170 4.170 24 C -0.088 4.088 25 C -0.173 4.173 26 C -0.118 4.118 27 C -0.032 4.032 28 H 0.393 0.607 29 H 0.112 0.888 30 H -0.287 1.287 31 H -0.285 1.285 32 H 0.183 0.817 33 H 0.175 0.825 34 H 0.417 0.583 35 H 0.093 0.907 36 H 0.061 0.939 37 H 0.077 0.923 38 H 0.069 0.931 39 H 0.142 0.858 40 H 0.143 0.857 41 H 0.140 0.860 42 H 0.146 0.854 43 H 0.132 0.868 44 H 0.098 0.902 45 H 0.112 0.888 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.823 0.715 -8.645 9.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.184 4.184 3 Si 0.652 3.348 4 C -0.167 4.167 5 C 0.103 3.897 6 F -0.078 7.078 7 C -0.159 4.159 8 C -0.060 4.060 9 C -0.160 4.160 10 C 0.350 3.650 11 O -0.459 6.459 12 N -0.344 5.344 13 C 0.007 3.993 14 H 0.107 0.893 15 C -0.186 4.186 16 C -0.120 4.120 17 H 0.126 0.874 18 C -0.011 4.011 19 O -0.244 6.244 20 C 0.067 3.933 21 C -0.237 4.237 22 C -0.107 4.107 23 C -0.188 4.188 24 C -0.105 4.105 25 C -0.192 4.192 26 C -0.156 4.156 27 C -0.051 4.051 28 H 0.242 0.758 29 H 0.129 0.871 30 H -0.214 1.214 31 H -0.211 1.211 32 H 0.201 0.799 33 H 0.193 0.807 34 H 0.256 0.744 35 H 0.112 0.888 36 H 0.080 0.920 37 H 0.095 0.905 38 H 0.087 0.913 39 H 0.160 0.840 40 H 0.161 0.839 41 H 0.158 0.842 42 H 0.164 0.836 43 H 0.150 0.850 44 H 0.116 0.884 45 H 0.130 0.870 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.267 0.786 -6.908 7.682 hybrid contribution -0.023 -0.501 0.407 0.646 sum 3.244 0.285 -6.501 7.271 Atomic orbital electron populations 1.86523 1.16824 1.81969 1.50404 1.25076 0.85463 1.11086 0.96809 0.93880 0.78229 0.76799 0.85928 1.20280 1.04715 0.96384 0.95319 1.17889 0.97149 0.80531 0.94159 1.91193 1.84138 1.37653 1.94768 1.21479 0.99863 0.95629 0.98922 1.21556 0.94110 0.93760 0.96576 1.19965 1.05763 0.94725 0.95507 1.18405 0.77043 0.85633 0.83958 1.90797 1.57499 1.68468 1.29174 1.45429 1.62175 1.16461 1.10311 1.21871 0.95588 0.81441 1.00447 0.89347 1.23558 0.99479 0.99504 0.96082 1.22637 0.98430 0.96468 0.94431 0.87386 1.23030 0.87317 0.97512 0.93233 1.86048 1.42222 1.40127 1.55954 1.19243 0.94866 0.86949 0.92199 1.21508 0.98410 0.98419 1.05373 1.21315 0.99315 0.95558 0.94541 1.21422 0.94063 1.01684 1.01599 1.21296 0.98694 0.93239 0.97313 1.20705 0.98724 0.99857 0.99902 1.23284 0.95634 1.02864 0.93792 1.20996 0.92898 0.92158 0.99056 0.75774 0.87081 1.21393 1.21124 0.79947 0.80737 0.74415 0.88838 0.92025 0.90513 0.91266 0.84028 0.83944 0.84205 0.83630 0.85036 0.88383 0.87017 0.85281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.75 12.88 -148.98 -1.92 -3.67 16 2 C -0.07 -0.18 2.80 71.24 0.20 0.02 16 3 Si 0.75 1.16 29.58 68.60 2.03 3.19 16 4 C -0.17 -0.18 4.78 -19.86 -0.09 -0.28 16 5 C 0.12 -0.41 6.62 22.47 0.15 -0.26 16 6 F -0.10 0.52 13.46 44.97 0.61 1.13 16 7 C -0.14 1.10 10.01 22.28 0.22 1.32 16 8 C -0.04 0.31 9.54 22.52 0.21 0.52 16 9 C -0.16 -0.06 5.87 -20.09 -0.12 -0.18 16 10 C 0.56 2.22 7.77 86.75 0.67 2.90 16 11 O -0.58 -7.83 15.94 -3.94 -0.06 -7.89 16 12 N -0.69 2.37 5.21 -443.02 -2.31 0.06 16 13 C 0.11 -0.31 4.32 45.52 0.20 -0.11 16 14 H 0.09 0.18 7.46 -2.38 -0.02 0.16 16 15 C -0.15 0.35 7.44 31.18 0.23 0.58 16 16 C -0.10 0.63 3.90 -10.20 -0.04 0.59 16 17 H 0.11 -0.78 8.14 -2.39 -0.02 -0.80 16 18 C 0.06 -0.24 4.58 71.98 0.33 0.09 16 19 O -0.33 -0.99 10.14 -92.38 -0.94 -1.93 16 20 C 0.11 0.45 6.69 22.51 0.15 0.61 16 21 C -0.22 -0.30 9.04 22.37 0.20 -0.10 16 22 C -0.09 -0.04 10.04 22.25 0.22 0.18 16 23 C -0.17 -0.10 10.04 22.28 0.22 0.12 16 24 C -0.09 -0.12 10.04 22.25 0.22 0.11 16 25 C -0.17 -0.64 9.99 22.37 0.22 -0.42 16 26 C -0.12 1.02 7.38 31.12 0.23 1.25 16 27 C -0.03 -0.12 9.21 22.52 0.21 0.09 16 28 H 0.39 -1.83 8.40 -74.06 -0.62 -2.46 16 29 H 0.11 0.39 7.77 -2.39 -0.02 0.37 16 30 H -0.29 -2.29 7.11 99.48 0.71 -1.59 16 31 H -0.28 -1.89 7.11 99.48 0.71 -1.19 16 32 H 0.18 -2.57 8.06 -2.91 -0.02 -2.59 16 33 H 0.18 -2.66 6.40 -2.91 -0.02 -2.68 16 34 H 0.42 -4.38 6.73 -92.71 -0.62 -5.00 16 35 H 0.09 -0.21 7.90 -2.39 -0.02 -0.23 16 36 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.08 -0.47 7.65 -2.39 -0.02 -0.49 16 38 H 0.07 -0.32 7.38 -2.38 -0.02 -0.33 16 39 H 0.14 -0.40 6.30 -2.91 -0.02 -0.42 16 40 H 0.14 -0.56 8.06 -2.91 -0.02 -0.58 16 41 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 42 H 0.15 -0.44 8.06 -2.91 -0.02 -0.47 16 43 H 0.13 0.28 8.06 -2.91 -0.02 0.25 16 44 H 0.10 -1.11 8.14 -2.39 -0.02 -1.13 16 45 H 0.11 -1.14 8.10 -2.39 -0.02 -1.16 16 46 H 0.13 0.85 7.58 -2.91 -0.02 0.83 16 Total: 0.00 -22.91 387.87 0.88 -22.04 By element: Atomic # 1 Polarization: -19.77 SS G_CDS: -0.18 Total: -19.95 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: 3.65 Total: 7.03 kcal Atomic # 7 Polarization: 2.37 SS G_CDS: -2.31 Total: 0.06 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: -2.92 Total: -13.49 kcal Atomic # 9 Polarization: 0.52 SS G_CDS: 0.61 Total: 1.13 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: 2.03 Total: 3.19 kcal Total: -22.91 0.88 -22.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534226_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.533 kcal (2) G-P(sol) polarization free energy of solvation -22.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.036 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds