Wall clock time and date at job start Sun Mar 7 2021 05:12:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86294 * 109.47466 * 2 1 4 4 C 1.50709 * 109.47012 * 239.99979 * 2 1 3 5 5 C 1.34194 * 126.53882 * 105.04412 * 4 2 1 6 6 N 1.36854 * 109.96665 * 179.97438 * 5 4 2 7 7 C 1.37402 * 109.98172 * 0.02562 * 6 5 4 8 8 C 1.39335 * 133.24971 * 180.30080 * 7 6 5 9 9 C 1.36350 * 120.23533 * 180.21836 * 8 7 6 10 10 C 1.40172 * 120.66562 * 359.44133 * 9 8 7 11 11 C 1.47655 * 119.97176 * 180.25453 * 10 9 8 12 12 O 1.21574 * 120.00227 * 180.02562 * 11 10 9 13 13 N 1.34775 * 120.00060 * 0.02562 * 11 10 9 14 14 C 1.46495 * 120.00174 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84879 * 25.33592 * 14 13 11 16 16 C 1.53783 * 113.61518 * 156.52532 * 14 13 11 17 17 C 1.53781 * 87.07829 * 89.11972 * 16 14 13 18 18 H 1.08994 * 113.61459 * 270.80002 * 17 16 14 19 19 C 1.53007 * 113.61302 * 139.98338 * 17 16 14 20 20 O 1.42902 * 109.46917 * 175.00168 * 19 17 16 21 21 C 1.35899 * 116.99872 * 179.97438 * 20 19 17 22 22 C 1.38734 * 120.05626 * 359.72260 * 21 20 19 23 23 C 1.38142 * 119.94453 * 179.74318 * 22 21 20 24 24 C 1.38273 * 120.05308 * 0.51368 * 23 22 21 25 25 C 1.38260 * 120.11132 * 359.76320 * 24 23 22 26 26 C 1.38145 * 120.05913 * 359.97438 * 25 24 23 27 27 C 1.53781 * 113.61919 * 254.13410 * 14 13 11 28 28 C 1.39185 * 120.05712 * 0.28557 * 10 9 8 29 29 C 1.39227 * 119.39111 * 359.97438 * 28 10 9 30 30 H 0.96699 * 113.99780 * 59.99863 * 1 2 3 31 31 H 1.09002 * 109.47456 * 120.00731 * 2 1 3 32 32 H 1.48497 * 109.99951 * 60.00193 * 3 2 1 33 33 H 1.48504 * 110.00181 * 181.31892 * 3 2 1 34 34 H 1.07998 * 125.01345 * 359.96113 * 5 4 2 35 35 H 0.97004 * 125.00884 * 180.02562 * 6 5 4 36 36 H 1.08003 * 119.88491 * 359.93758 * 8 7 6 37 37 H 1.08002 * 119.66959 * 179.72887 * 9 8 7 38 38 H 0.97007 * 120.00242 * 359.97438 * 13 11 10 39 39 H 1.09001 * 113.61576 * 203.66731 * 16 14 13 40 40 H 1.08997 * 113.61442 * 334.49114 * 16 14 13 41 41 H 1.08997 * 109.46628 * 294.99581 * 19 17 16 42 42 H 1.08997 * 109.47577 * 54.99850 * 19 17 16 43 43 H 1.08003 * 120.02633 * 359.97438 * 22 21 20 44 44 H 1.07996 * 119.97648 * 180.23228 * 23 22 21 45 45 H 1.08000 * 119.94108 * 179.74108 * 24 23 22 46 46 H 1.08008 * 119.97322 * 180.02562 * 25 24 23 47 47 H 1.07995 * 120.03037 * 180.02562 * 26 25 24 48 48 H 1.08998 * 113.61228 * 25.43638 * 27 14 13 49 49 H 1.09006 * 113.61584 * 156.33149 * 27 14 13 50 50 H 1.08002 * 120.30466 * 179.97438 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.4614 -0.1387 -2.3227 6 7 2.8036 -1.1004 -3.2342 7 6 2.4951 -2.3454 -2.7415 8 6 2.6384 -3.6353 -3.2486 9 6 2.2277 -4.7101 -2.5170 10 6 1.6679 -4.5366 -1.2438 11 6 1.2335 -5.7118 -0.4625 12 8 0.7474 -5.5619 0.6417 13 7 1.3758 -6.9508 -0.9735 14 6 0.9453 -8.1168 -0.1982 15 1 0.1649 -7.8797 0.5249 16 6 0.6303 -9.3491 -1.0625 17 6 2.1123 -9.7326 -0.9165 18 1 2.7515 -9.3080 -1.6906 19 6 2.3404 -11.2320 -0.7141 20 8 3.7433 -11.5035 -0.7059 21 6 4.1202 -12.7979 -0.5344 22 6 3.1596 -13.7856 -0.3715 23 6 3.5452 -15.1013 -0.2027 24 6 4.8875 -15.4328 -0.1853 25 6 5.8468 -14.4496 -0.3417 26 6 5.4663 -13.1331 -0.5163 27 6 2.1103 -8.9260 0.3959 28 6 1.5205 -3.2573 -0.7155 29 6 1.9341 -2.1577 -1.4626 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5616 2.4678 1.2085 33 1 3.5347 1.7701 -0.0321 34 1 2.5977 0.9236 -2.4619 35 1 3.2049 -0.9285 -4.1005 36 1 3.0722 -3.7840 -4.2264 37 1 2.3392 -5.7056 -2.9208 38 1 1.7633 -7.0705 -1.8547 39 1 -0.0519 -10.0535 -0.5864 40 1 0.3401 -9.1034 -2.0840 41 1 1.9051 -11.5406 0.2363 42 1 1.8681 -11.7843 -1.5265 43 1 2.1112 -13.5264 -0.3804 44 1 2.7977 -15.8710 -0.0796 45 1 5.1869 -16.4615 -0.0490 46 1 6.8947 -14.7111 -0.3282 47 1 6.2161 -12.3655 -0.6389 48 1 3.0155 -8.3388 0.5506 49 1 1.8320 -9.5148 1.2700 50 1 1.0892 -3.1189 0.2650 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534226_13287722.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:39 Heat of formation + Delta-G solvation = 12.883021 kcal Electronic energy + Delta-G solvation = -32460.219087 eV Core-core repulsion = 27999.582741 eV Total energy + Delta-G solvation = -4460.636346 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.50109 -41.47243 -40.82696 -39.51509 -38.11202 -37.83695 -37.34304 -34.45984 -33.26955 -31.99417 -31.20335 -30.76111 -30.44330 -28.98594 -26.81553 -26.48309 -25.28542 -24.12502 -23.49933 -23.29000 -22.53097 -21.71729 -20.79397 -20.31601 -19.34590 -19.15123 -18.46200 -17.49412 -17.41460 -17.20165 -16.91168 -16.84818 -16.65279 -16.21309 -16.00373 -15.77330 -15.56002 -15.46064 -15.16563 -15.04492 -14.90523 -14.75637 -14.62975 -14.33001 -14.05226 -14.03643 -13.82011 -13.65998 -13.59576 -13.40966 -13.12478 -12.59376 -12.49934 -12.28616 -12.19192 -12.15011 -12.05467 -11.87868 -11.72736 -11.62330 -11.23577 -10.84057 -10.79561 -10.32242 -10.03254 -9.91992 -9.33686 -9.11616 -8.83979 -5.08528 -0.05891 0.17655 0.42427 0.54372 1.30583 1.46521 1.65044 1.96221 1.98361 2.00097 2.12572 2.17773 2.88826 2.95577 3.34466 3.43444 3.56580 3.57382 3.69673 3.73614 3.75679 3.80136 3.85762 3.91246 3.96267 4.06768 4.16112 4.24104 4.28418 4.32973 4.35931 4.41279 4.48886 4.49255 4.56274 4.57757 4.59399 4.63358 4.73139 4.76491 4.81782 4.97206 5.00997 5.01825 5.08665 5.10616 5.24135 5.36771 5.38523 5.48369 5.50353 5.59116 5.61266 5.64209 5.85922 5.96949 6.34748 6.49427 6.54561 6.69352 7.32178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.034 4.034 3 Si 0.687 3.313 4 C -0.192 4.192 5 C 0.061 3.939 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.568 3.432 12 O -0.535 6.535 13 N -0.712 5.712 14 C 0.122 3.878 15 H 0.107 0.893 16 C -0.136 4.136 17 C -0.110 4.110 18 H 0.101 0.899 19 C 0.069 3.931 20 O -0.313 6.313 21 C 0.130 3.870 22 C -0.211 4.211 23 C -0.080 4.080 24 C -0.160 4.160 25 C -0.080 4.080 26 C -0.154 4.154 27 C -0.145 4.145 28 C 0.008 3.992 29 C -0.103 4.103 30 H 0.376 0.624 31 H 0.113 0.887 32 H -0.254 1.254 33 H -0.256 1.256 34 H 0.179 0.821 35 H 0.421 0.579 36 H 0.128 0.872 37 H 0.128 0.872 38 H 0.400 0.600 39 H 0.100 0.900 40 H 0.080 0.920 41 H 0.065 0.935 42 H 0.064 0.936 43 H 0.127 0.873 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.129 0.871 47 H 0.130 0.870 48 H 0.076 0.924 49 H 0.093 0.907 50 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.741 1.245 -7.319 7.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.146 4.146 3 Si 0.588 3.412 4 C -0.199 4.199 5 C -0.065 4.065 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.357 3.643 12 O -0.412 6.412 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.125 0.875 16 C -0.174 4.174 17 C -0.129 4.129 18 H 0.120 0.880 19 C -0.006 4.006 20 O -0.227 6.227 21 C 0.084 3.916 22 C -0.229 4.229 23 C -0.099 4.099 24 C -0.178 4.178 25 C -0.098 4.098 26 C -0.173 4.173 27 C -0.183 4.183 28 C -0.011 4.011 29 C -0.108 4.108 30 H 0.223 0.777 31 H 0.130 0.870 32 H -0.178 1.178 33 H -0.181 1.181 34 H 0.196 0.804 35 H 0.259 0.741 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.236 0.764 39 H 0.118 0.882 40 H 0.099 0.901 41 H 0.084 0.916 42 H 0.082 0.918 43 H 0.145 0.855 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.147 0.853 47 H 0.148 0.852 48 H 0.095 0.905 49 H 0.112 0.888 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.118 1.886 -5.665 6.074 hybrid contribution 0.392 -0.852 -0.795 1.229 sum 1.510 1.034 -6.459 6.713 Atomic orbital electron populations 1.86538 1.17271 1.81720 1.48907 1.24414 0.84903 1.09017 0.96248 0.95343 0.80645 0.77172 0.87995 1.20769 1.09256 0.91973 0.97949 1.21683 1.01045 0.94299 0.89469 1.41735 1.54608 1.04145 1.18241 1.18437 0.99812 0.86524 0.94234 1.19665 1.05675 0.88846 1.01220 1.20579 0.96705 0.98348 0.93010 1.19519 1.08334 0.93210 0.96281 1.18174 0.77730 0.82764 0.85675 1.90800 1.44214 1.85989 1.20201 1.45551 1.64660 1.05200 1.20991 1.21774 0.97735 0.84333 0.94512 0.87466 1.23330 0.95536 0.97083 1.01415 1.22696 0.97474 0.92956 0.99757 0.88044 1.22864 0.79897 0.96379 1.01478 1.86078 1.25866 1.23498 1.87264 1.19035 0.93679 0.83093 0.95763 1.21276 0.99145 0.93772 1.08747 1.20996 0.96325 0.95535 0.96995 1.21118 0.93006 0.99750 1.03919 1.21022 0.99872 0.91888 0.97066 1.20486 0.93276 0.97208 1.06288 1.23564 0.99684 0.98227 0.96867 1.20700 0.92370 0.89202 0.98864 1.18922 1.04539 0.92972 0.94321 0.77657 0.87003 1.17818 1.18084 0.80428 0.74093 0.85416 0.85456 0.76431 0.88179 0.90102 0.91640 0.91771 0.85547 0.85731 0.85802 0.85273 0.85225 0.90513 0.88841 0.84371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.66 12.88 -35.23 -0.45 -1.11 16 2 C -0.03 -0.02 3.06 36.01 0.11 0.10 16 3 Si 0.69 -1.02 30.76 -169.99 -5.23 -6.25 16 4 C -0.19 -0.11 5.58 -102.68 -0.57 -0.68 16 5 C 0.06 -0.13 10.43 -16.73 -0.17 -0.30 16 6 N -0.59 1.22 6.05 -10.61 -0.06 1.16 16 7 C 0.12 0.07 7.27 -83.95 -0.61 -0.54 16 8 C -0.13 0.08 10.00 -39.85 -0.40 -0.32 16 9 C -0.07 0.01 9.46 -39.54 -0.37 -0.36 16 10 C -0.17 -0.42 5.87 -104.98 -0.62 -1.04 16 11 C 0.57 2.05 7.76 -12.42 -0.10 1.96 16 12 O -0.53 -4.03 15.95 5.30 0.08 -3.95 16 13 N -0.71 -0.21 5.21 -54.02 -0.28 -0.49 16 14 C 0.12 0.00 4.29 -67.12 -0.29 -0.29 16 15 H 0.11 0.18 7.50 -51.93 -0.39 -0.21 16 16 C -0.14 0.33 7.38 -25.92 -0.19 0.14 16 17 C -0.11 0.16 3.90 -89.66 -0.35 -0.19 16 18 H 0.10 -0.15 8.14 -51.93 -0.42 -0.58 16 19 C 0.07 -0.04 4.58 37.16 0.17 0.13 16 20 O -0.31 -0.72 10.14 -19.42 -0.20 -0.91 16 21 C 0.13 0.33 6.69 -39.21 -0.26 0.07 16 22 C -0.21 -0.31 9.04 -39.43 -0.36 -0.66 16 23 C -0.08 -0.08 10.04 -39.60 -0.40 -0.48 16 24 C -0.16 -0.16 10.04 -39.56 -0.40 -0.56 16 25 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 26 C -0.15 -0.33 9.99 -39.43 -0.39 -0.73 16 27 C -0.14 0.02 7.45 -25.78 -0.19 -0.17 16 28 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 29 C -0.10 -0.25 6.34 -105.16 -0.67 -0.92 16 30 H 0.38 -1.14 8.70 45.56 0.40 -0.74 16 31 H 0.11 0.18 7.96 -51.93 -0.41 -0.23 16 32 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 33 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 34 H 0.18 -1.03 6.35 -52.49 -0.33 -1.36 16 35 H 0.42 -2.18 8.96 -40.82 -0.37 -2.55 16 36 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 37 H 0.13 -0.40 6.36 -52.49 -0.33 -0.74 16 38 H 0.40 -0.93 6.71 -40.82 -0.27 -1.20 16 39 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 40 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 41 H 0.07 -0.08 7.35 -51.93 -0.38 -0.46 16 42 H 0.06 -0.10 7.68 -51.93 -0.40 -0.49 16 43 H 0.13 -0.05 6.30 -52.48 -0.33 -0.38 16 44 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 45 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 46 H 0.13 -0.12 8.06 -52.48 -0.42 -0.55 16 47 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 48 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 49 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 50 H 0.14 0.66 7.64 -52.49 -0.40 0.26 16 LS Contribution 416.29 15.07 6.27 6.27 Total: 0.00 -11.17 416.29 -13.33 -24.50 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -6.64 Total: -13.53 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: -6.83 Total: -5.69 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.35 Total: 0.67 kcal Atomic # 8 Polarization: -5.41 SS G_CDS: -0.57 Total: -5.97 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.23 Total: -6.25 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -11.17 -13.33 -24.50 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534226_13287722.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.386 kcal (2) G-P(sol) polarization free energy of solvation -11.168 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.503 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds