Wall clock time and date at job start Sun Mar 7 2021 05:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46934 * 2 1 4 4 C 1.50696 * 109.47295 * 239.99733 * 2 1 3 5 5 C 1.34859 * 125.89011 * 119.95877 * 4 2 1 6 6 C 1.40885 * 107.41515 * 179.80640 * 5 4 2 7 7 C 1.34848 * 107.42034 * 0.37503 * 6 5 4 8 8 C 1.50695 * 125.89154 * 179.88451 * 7 6 5 9 9 C 1.50701 * 109.47283 * 274.69453 * 8 7 6 10 10 O 1.21280 * 120.00170 * 0.02562 * 9 8 7 11 11 N 1.34777 * 120.00083 * 179.97438 * 9 8 7 12 12 C 1.46502 * 120.00077 * 180.02562 * 11 9 8 13 13 H 1.09005 * 112.84750 * 23.80236 * 12 11 9 14 14 C 1.53778 * 113.61567 * 155.00460 * 12 11 9 15 15 C 1.53776 * 87.08465 * 89.11316 * 14 12 11 16 16 H 1.09001 * 113.61661 * 270.80214 * 15 14 12 17 17 C 1.52998 * 113.61428 * 139.97925 * 15 14 12 18 18 O 1.42901 * 109.47046 * 175.00210 * 17 15 14 19 19 C 1.35905 * 116.99604 * 180.02562 * 18 17 15 20 20 C 1.38723 * 120.05884 * 359.72201 * 19 18 17 21 21 C 1.38145 * 119.94323 * 179.77076 * 20 19 18 22 22 C 1.38260 * 120.05692 * 0.50972 * 21 20 19 23 23 C 1.38268 * 120.10972 * 359.74026 * 22 21 20 24 24 C 1.38139 * 120.05510 * 0.02562 * 23 22 21 25 25 C 1.53784 * 87.08046 * 25.43342 * 15 14 12 26 26 N 1.36335 * 125.89508 * 299.99956 * 4 2 1 27 27 H 0.96702 * 113.99716 * 60.00583 * 1 2 3 28 28 H 1.09002 * 109.46967 * 119.99692 * 2 1 3 29 29 H 1.48499 * 109.99680 * 298.67680 * 3 2 1 30 30 H 1.48496 * 109.99868 * 59.99810 * 3 2 1 31 31 H 1.08006 * 126.28671 * 0.05580 * 5 4 2 32 32 H 1.07998 * 126.28907 * 180.24157 * 6 5 4 33 33 H 1.09001 * 109.47343 * 154.69691 * 8 7 6 34 34 H 1.08997 * 109.47222 * 34.69440 * 8 7 6 35 35 H 0.97002 * 120.00278 * 0.02562 * 11 9 8 36 36 H 1.09002 * 113.61364 * 334.56128 * 14 12 11 37 37 H 1.08997 * 113.61502 * 203.66402 * 14 12 11 38 38 H 1.08999 * 109.47084 * 55.00252 * 17 15 14 39 39 H 1.08998 * 109.47592 * 295.00354 * 17 15 14 40 40 H 1.08001 * 120.02769 * 0.02562 * 20 19 18 41 41 H 1.08006 * 119.97076 * 180.25587 * 21 20 19 42 42 H 1.08001 * 119.94806 * 179.77234 * 22 21 20 43 43 H 1.08008 * 119.97007 * 179.97438 * 23 22 21 44 44 H 1.08005 * 120.02914 * 180.02562 * 24 23 22 45 45 H 1.08999 * 113.61579 * 89.11443 * 25 15 14 46 46 H 1.09002 * 113.61460 * 220.01544 * 25 15 14 47 47 H 0.97003 * 125.63454 * 359.94692 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7093 -0.1725 -2.1917 6 6 2.9483 -1.1759 -3.1514 7 6 2.3005 -2.2863 -2.7443 8 6 2.2751 -3.6089 -3.4661 9 6 1.1817 -3.5945 -4.5030 10 8 0.4913 -2.6072 -4.6426 11 7 0.9717 -4.6784 -5.2761 12 6 -0.0908 -4.6641 -6.2846 13 1 -0.3556 -3.6568 -6.6062 14 6 0.1518 -5.6389 -7.4489 15 6 -0.5838 -6.6985 -6.6117 16 1 0.0722 -7.2663 -5.9519 17 6 -1.5159 -7.5906 -7.4340 18 8 -2.0612 -8.6110 -6.5952 19 6 -2.9154 -9.4949 -7.1749 20 6 -3.2269 -9.3791 -8.5217 21 6 -4.0917 -10.2818 -9.1096 22 6 -4.6549 -11.2938 -8.3543 23 6 -4.3501 -11.4083 -7.0106 24 6 -3.4821 -10.5110 -6.4191 25 6 -1.3041 -5.5331 -5.9133 26 7 1.6772 -2.0076 -1.5642 27 1 -0.3933 0.4416 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5614 2.4679 1.2084 31 1 3.0839 0.8402 -2.2186 32 1 3.5396 -1.0737 -4.0493 33 1 2.0869 -4.4096 -2.7508 34 1 3.2358 -3.7754 -3.9533 35 1 1.5241 -5.4679 -5.1648 36 1 1.2046 -5.8673 -7.6150 37 1 -0.3724 -5.3647 -8.3644 38 1 -0.9547 -8.0503 -8.2475 39 1 -2.3254 -6.9881 -7.8462 40 1 -2.7904 -8.5863 -9.1111 41 1 -4.3313 -10.1945 -10.1591 42 1 -5.3337 -11.9963 -8.8149 43 1 -4.7917 -12.1994 -6.4226 44 1 -3.2440 -10.6011 -5.3695 45 1 -2.2263 -5.2299 -6.4090 46 1 -1.4268 -5.6760 -4.8397 47 1 1.1416 -2.6297 -1.0473 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534226_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:13:38 Heat of formation + Delta-G solvation = -6.758192 kcal Electronic energy + Delta-G solvation = -28122.459166 eV Core-core repulsion = 24045.649535 eV Total energy + Delta-G solvation = -4076.809631 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.30063 -41.49466 -40.81766 -39.42227 -38.10589 -37.73784 -34.53982 -33.05736 -32.01152 -31.84684 -31.06776 -29.68234 -28.81484 -26.90232 -25.38308 -24.42826 -23.38155 -22.63542 -22.22501 -21.27961 -20.97380 -20.40631 -19.21044 -18.93282 -18.28744 -17.39323 -17.20332 -16.96532 -16.77928 -16.61690 -16.34801 -16.31817 -15.71450 -15.36905 -15.17317 -15.13430 -14.79989 -14.51558 -14.37062 -14.26208 -14.11046 -13.98499 -13.74414 -13.72220 -13.58726 -13.45317 -13.18225 -12.79223 -12.54143 -12.22096 -12.12664 -12.09682 -11.78920 -11.73551 -11.69146 -11.32165 -10.92253 -10.74886 -10.13043 -9.95706 -9.70646 -9.15825 -8.89780 -4.86787 0.38730 0.50529 1.12779 1.34202 1.58652 1.72479 1.88055 1.99993 2.12092 2.25918 2.50789 2.85089 3.26888 3.35266 3.40072 3.60759 3.63953 3.66588 3.85518 3.86797 3.91155 3.92411 4.00646 4.10141 4.19327 4.23613 4.27237 4.34029 4.45602 4.47805 4.51571 4.52835 4.55073 4.60556 4.68216 4.72732 4.83359 4.89083 4.90503 5.01603 5.05388 5.32966 5.34451 5.36500 5.46496 5.48270 5.60708 5.81924 6.05326 6.20643 6.38524 6.42352 6.44695 6.67091 7.18335 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.714 3.286 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.173 4.173 7 C 0.035 3.965 8 C -0.072 4.072 9 C 0.514 3.486 10 O -0.521 6.521 11 N -0.716 5.716 12 C 0.121 3.879 13 H 0.107 0.893 14 C -0.136 4.136 15 C -0.110 4.110 16 H 0.102 0.898 17 C 0.069 3.931 18 O -0.314 6.314 19 C 0.129 3.871 20 C -0.211 4.211 21 C -0.080 4.080 22 C -0.159 4.159 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.145 4.145 26 N -0.535 5.535 27 H 0.380 0.620 28 H 0.115 0.885 29 H -0.257 1.257 30 H -0.258 1.258 31 H 0.142 0.858 32 H 0.136 0.864 33 H 0.100 0.900 34 H 0.119 0.881 35 H 0.402 0.598 36 H 0.081 0.919 37 H 0.099 0.901 38 H 0.064 0.936 39 H 0.065 0.935 40 H 0.127 0.873 41 H 0.125 0.875 42 H 0.124 0.876 43 H 0.130 0.870 44 H 0.130 0.870 45 H 0.092 0.908 46 H 0.074 0.926 47 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.841 -3.598 -1.901 5.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.165 4.165 3 Si 0.614 3.386 4 C -0.122 4.122 5 C -0.211 4.211 6 C -0.197 4.197 7 C -0.078 4.078 8 C -0.112 4.112 9 C 0.300 3.700 10 O -0.395 6.395 11 N -0.369 5.369 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.174 4.174 15 C -0.128 4.128 16 H 0.120 0.880 17 C -0.007 4.007 18 O -0.228 6.228 19 C 0.084 3.916 20 C -0.229 4.229 21 C -0.098 4.098 22 C -0.177 4.177 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.183 4.183 26 N -0.130 5.130 27 H 0.228 0.772 28 H 0.132 0.868 29 H -0.182 1.182 30 H -0.183 1.183 31 H 0.159 0.841 32 H 0.154 0.846 33 H 0.118 0.882 34 H 0.137 0.863 35 H 0.236 0.764 36 H 0.100 0.900 37 H 0.118 0.882 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.144 0.856 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.111 0.889 46 H 0.093 0.907 47 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 3.194 -2.403 -1.159 4.162 hybrid contribution -1.140 -1.073 -0.620 1.684 sum 2.054 -3.475 -1.779 4.412 Atomic orbital electron populations 1.86562 1.17955 1.80238 1.49638 1.24786 0.83761 1.11444 0.96478 0.94448 0.91406 0.72566 0.80209 1.20789 1.05889 0.85397 1.00145 1.20654 1.04531 1.00001 0.95919 1.20586 1.05683 0.92310 1.01146 1.19467 1.02331 0.96465 0.89550 1.20131 0.99664 0.94821 0.96620 1.20635 0.84872 0.82650 0.81854 1.90771 1.47776 1.32678 1.68294 1.45677 1.36226 1.17295 1.37656 1.21780 0.87909 1.00302 0.88469 0.87548 1.23333 1.01602 0.94758 0.97673 1.22643 0.97566 0.94230 0.98381 0.88005 1.22859 0.96337 0.88235 0.93223 1.86074 1.58123 1.39791 1.38767 1.19029 0.90741 0.90272 0.91586 1.21271 1.04212 1.03158 0.94289 1.20998 0.95179 0.93807 0.99857 1.21124 1.02314 0.99839 0.94464 1.21027 0.96018 0.97787 0.95001 1.20484 1.00631 0.95623 1.00502 1.23512 0.97823 0.95103 1.01902 1.41788 1.40999 1.11016 1.19195 0.77226 0.86761 1.18153 1.18314 0.84073 0.84563 0.88155 0.86346 0.76368 0.90049 0.88244 0.91735 0.91673 0.85561 0.85709 0.85768 0.85243 0.85228 0.88904 0.90694 0.75103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.25 12.88 -35.23 -0.45 -1.71 16 2 C -0.06 -0.04 3.08 36.00 0.11 0.07 16 3 Si 0.71 -0.16 30.59 -169.99 -5.20 -5.36 16 4 C -0.01 -0.02 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.38 9.37 -39.78 -0.37 -0.75 16 6 C -0.17 -0.38 10.76 -39.78 -0.43 -0.81 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.42 16 8 C -0.07 0.13 6.24 -29.04 -0.18 -0.05 16 9 C 0.51 0.37 7.82 -10.98 -0.09 0.28 16 10 O -0.52 -2.91 15.63 5.56 0.09 -2.83 16 11 N -0.72 1.35 5.26 -53.01 -0.28 1.07 16 12 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 13 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 14 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 15 C -0.11 0.25 3.89 -89.81 -0.35 -0.10 16 16 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 17 C 0.07 -0.08 4.58 37.16 0.17 0.09 16 18 O -0.31 -0.57 10.14 -19.44 -0.20 -0.77 16 19 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 20 C -0.21 -0.24 9.04 -39.44 -0.36 -0.59 16 21 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 22 C -0.16 -0.11 10.04 -39.56 -0.40 -0.51 16 23 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 24 C -0.15 -0.28 9.99 -39.44 -0.39 -0.67 16 25 C -0.14 0.15 7.43 -25.92 -0.19 -0.04 16 26 N -0.54 -0.69 6.07 -5.44 -0.03 -0.72 16 27 H 0.38 0.12 8.70 45.56 0.40 0.51 16 28 H 0.11 -0.05 7.96 -51.93 -0.41 -0.46 16 29 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 30 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 31 H 0.14 0.05 6.22 -52.48 -0.33 -0.28 16 32 H 0.14 0.14 8.06 -52.49 -0.42 -0.28 16 33 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 34 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 35 H 0.40 -1.86 8.70 -40.82 -0.36 -2.22 16 36 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 38 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 39 H 0.07 -0.11 7.35 -51.93 -0.38 -0.49 16 40 H 0.13 -0.09 6.30 -52.49 -0.33 -0.42 16 41 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 42 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.13 -0.16 8.06 -52.48 -0.42 -0.58 16 44 H 0.13 0.10 8.06 -52.48 -0.42 -0.32 16 45 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 46 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.41 -0.10 8.96 -40.82 -0.37 -0.47 16 LS Contribution 394.00 15.07 5.94 5.94 Total: 0.00 -9.84 394.00 -11.97 -21.81 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -6.82 Total: -12.30 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: -5.01 Total: -5.14 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: -0.31 Total: 0.35 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -0.56 Total: -5.30 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.20 Total: -5.36 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.84 -11.97 -21.81 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534226_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.050 kcal (2) G-P(sol) polarization free energy of solvation -9.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds