Wall clock time and date at job start Sun Mar 7 2021 05:28:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81405 * 1 3 3 C 1.81401 * 102.99957 * 2 1 4 4 C 1.53003 * 109.47064 * 180.02562 * 3 2 1 5 5 H 1.09006 * 112.84543 * 43.80174 * 4 3 2 6 6 C 1.53779 * 113.61537 * 175.00102 * 4 3 2 7 7 C 1.53773 * 87.08090 * 139.98062 * 6 4 3 8 8 H 1.09003 * 113.61829 * 89.11279 * 7 6 4 9 9 N 1.46497 * 113.61684 * 219.93255 * 7 6 4 10 10 C 1.34776 * 120.00386 * 205.00081 * 9 7 6 11 11 O 1.21688 * 120.00125 * 359.97438 * 10 9 7 12 12 C 1.46687 * 119.99836 * 179.97438 * 10 9 7 13 13 C 1.37866 * 126.23039 * 179.97438 * 12 10 9 14 14 C 1.50705 * 126.45772 * 0.04177 * 13 12 10 15 15 C 1.39836 * 107.08409 * 179.97438 * 13 12 10 16 16 C 1.50700 * 126.06718 * 179.97438 * 15 13 12 17 17 O 1.42902 * 109.47212 * 335.79834 * 16 15 13 18 18 Si 1.86296 * 109.47377 * 215.79227 * 16 15 13 19 19 C 1.35449 * 107.86438 * 0.02562 * 15 13 12 20 20 C 1.50702 * 125.56266 * 180.02562 * 19 15 13 21 21 N 1.35531 * 108.87328 * 359.72760 * 19 15 13 22 22 C 1.53780 * 113.61263 * 272.49880 * 4 3 2 23 23 H 1.09004 * 109.47193 * 59.99774 * 1 2 3 24 24 H 1.08997 * 109.47188 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47257 * 299.99885 * 1 2 3 26 26 H 1.08998 * 109.46865 * 59.99919 * 3 2 1 27 27 H 1.09003 * 109.47175 * 300.00118 * 3 2 1 28 28 H 1.09004 * 113.61349 * 254.53230 * 6 4 3 29 29 H 1.09001 * 113.61125 * 25.34369 * 6 4 3 30 30 H 0.97007 * 119.99365 * 25.00496 * 9 7 6 31 31 H 1.09003 * 109.46953 * 89.97178 * 14 13 12 32 32 H 1.08997 * 109.46688 * 209.96810 * 14 13 12 33 33 H 1.08998 * 109.47274 * 329.97161 * 14 13 12 34 34 H 1.09004 * 109.46901 * 95.79508 * 16 15 13 35 35 H 0.96701 * 113.99791 * 299.99087 * 17 16 15 36 36 H 1.48502 * 109.99919 * 58.68252 * 18 16 15 37 37 H 1.48503 * 110.00204 * 180.02562 * 18 16 15 38 38 H 1.09002 * 109.46908 * 83.98415 * 20 19 15 39 39 H 1.08998 * 109.47106 * 203.98420 * 20 19 15 40 40 H 1.09000 * 109.47247 * 323.98343 * 20 19 15 41 41 H 0.96995 * 125.68397 * 180.30415 * 21 19 15 42 42 H 1.09000 * 113.61553 * 334.56735 * 22 4 3 43 43 H 1.09000 * 113.61606 * 105.46970 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8141 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 6 3.7424 1.9400 -0.0006 5 1 4.2443 1.2673 -0.6962 6 6 4.1962 3.4041 -0.1235 7 6 5.2875 3.0700 0.9071 8 1 6.2130 2.7061 0.4608 9 7 5.5099 4.1319 1.8915 10 6 6.7014 4.2363 2.5127 11 8 7.5925 3.4483 2.2562 12 6 6.9242 5.3000 3.4979 13 6 8.0855 5.5245 4.2062 14 6 9.3601 4.7259 4.1125 15 6 7.8583 6.6338 5.0267 16 6 8.8484 7.2478 5.9827 17 8 9.8157 6.2668 6.3619 18 14 7.9527 7.8555 7.4989 19 6 6.5902 7.0578 4.8105 20 6 5.9305 8.2306 5.4891 21 7 6.0136 6.2592 3.8796 22 6 4.3620 1.9482 1.4068 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 1.8031 2.2371 0.8900 27 1 1.8031 2.2372 -0.8900 28 1 4.5886 3.6585 -1.1081 29 1 3.4587 4.1215 0.2364 30 1 4.7994 4.7599 2.0963 31 1 10.0021 5.1551 3.3432 32 1 9.8762 4.7515 5.0723 33 1 9.1240 3.6936 3.8543 34 1 9.3507 8.0848 5.4976 35 1 9.4388 5.4918 6.8005 36 1 7.2375 6.7296 8.1517 37 1 8.9180 8.4639 8.4494 38 1 6.1948 9.1492 4.9652 39 1 4.8486 8.0999 5.4700 40 1 6.2710 8.2910 6.5228 41 1 5.1094 6.3477 3.5401 42 1 3.6704 2.2675 2.1865 43 1 4.8882 1.0272 1.6576 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534458_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:28:43 Heat of formation + Delta-G solvation = -2.930129 kcal Electronic energy + Delta-G solvation = -23582.873018 eV Core-core repulsion = 20143.204625 eV Total energy + Delta-G solvation = -3439.668393 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.134 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.69016 -40.99352 -39.24115 -37.86942 -34.98446 -33.65531 -33.05486 -30.78097 -29.79157 -29.38328 -27.44614 -26.87739 -26.32612 -23.96178 -22.16776 -21.16165 -20.72027 -20.22725 -19.23634 -17.84148 -17.46869 -16.87232 -16.79655 -16.58907 -16.36856 -15.94156 -15.75387 -15.42254 -15.04587 -14.81582 -14.78596 -14.40454 -14.31513 -14.23846 -13.95130 -13.93008 -13.66091 -13.59214 -13.50331 -13.24688 -13.17446 -12.96323 -12.49559 -12.27533 -12.20478 -11.77067 -11.70000 -11.57181 -10.98930 -10.95727 -10.43019 -10.15220 -9.47784 -9.00557 -8.69263 -4.76677 0.40490 0.62591 1.21083 1.56447 1.65146 1.69507 1.91962 2.04433 2.12028 2.38122 3.28249 3.39114 3.41394 3.56800 3.61273 3.65853 3.78379 3.91500 3.99618 4.10432 4.11432 4.15018 4.17430 4.27107 4.37385 4.40540 4.50078 4.59926 4.61687 4.67329 4.69243 4.70035 4.74793 4.85181 4.94638 4.95790 5.12058 5.16554 5.38656 5.41001 5.50520 5.72337 5.94737 6.26257 6.44375 6.55889 7.17171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.261 6.261 3 C -0.073 4.073 4 C -0.092 4.092 5 H 0.105 0.895 6 C -0.136 4.136 7 C 0.125 3.875 8 H 0.121 0.879 9 N -0.724 5.724 10 C 0.592 3.408 11 O -0.520 6.520 12 C -0.065 4.065 13 C -0.043 4.043 14 C -0.101 4.101 15 C -0.208 4.208 16 C -0.030 4.030 17 O -0.528 6.528 18 Si 0.639 3.361 19 C 0.062 3.938 20 C -0.085 4.085 21 N -0.535 5.535 22 C -0.143 4.143 23 H 0.077 0.923 24 H 0.102 0.898 25 H 0.076 0.924 26 H 0.081 0.919 27 H 0.084 0.916 28 H 0.081 0.919 29 H 0.087 0.913 30 H 0.393 0.607 31 H 0.067 0.933 32 H 0.081 0.919 33 H 0.075 0.925 34 H 0.113 0.887 35 H 0.375 0.625 36 H -0.261 1.261 37 H -0.253 1.253 38 H 0.096 0.904 39 H 0.081 0.919 40 H 0.088 0.912 41 H 0.415 0.585 42 H 0.085 0.915 43 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.710 5.272 -0.640 9.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.292 4.292 2 S -0.035 6.035 3 C -0.221 4.221 4 C -0.112 4.112 5 H 0.124 0.876 6 C -0.176 4.176 7 C 0.021 3.979 8 H 0.138 0.862 9 N -0.374 5.374 10 C 0.380 3.620 11 O -0.396 6.396 12 C -0.177 4.177 13 C -0.051 4.051 14 C -0.157 4.157 15 C -0.215 4.215 16 C -0.141 4.141 17 O -0.334 6.334 18 Si 0.539 3.461 19 C -0.056 4.056 20 C -0.140 4.140 21 N -0.132 5.132 22 C -0.182 4.182 23 H 0.096 0.904 24 H 0.121 0.879 25 H 0.095 0.905 26 H 0.099 0.901 27 H 0.102 0.898 28 H 0.100 0.900 29 H 0.105 0.895 30 H 0.227 0.773 31 H 0.085 0.915 32 H 0.099 0.901 33 H 0.094 0.906 34 H 0.131 0.869 35 H 0.223 0.777 36 H -0.185 1.185 37 H -0.178 1.178 38 H 0.115 0.885 39 H 0.100 0.900 40 H 0.105 0.895 41 H 0.253 0.747 42 H 0.104 0.896 43 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -6.232 4.133 -0.332 7.485 hybrid contribution -1.513 0.181 -0.085 1.526 sum -7.745 4.314 -0.417 8.875 Atomic orbital electron populations 1.23400 0.94102 1.06785 1.04890 1.87105 1.07399 1.10939 1.98031 1.23382 0.99086 0.94791 1.04877 1.22109 0.92675 0.97427 0.98993 0.87638 1.23426 0.97742 0.96296 1.00138 1.22510 0.98606 0.87739 0.89077 0.86151 1.45851 1.14614 1.33647 1.43292 1.17047 0.82271 0.82970 0.79691 1.90844 1.42837 1.42361 1.63545 1.20132 0.92419 0.97612 1.07511 1.19807 0.94392 0.96020 0.94891 1.20598 0.92666 0.99332 1.03148 1.19571 0.94974 1.01451 1.05459 1.24199 0.92898 0.93890 1.03119 1.86563 1.34832 1.32715 1.79297 0.95392 0.83866 0.88825 0.77976 1.20127 0.93489 0.96358 0.95627 1.20535 1.00502 0.94784 0.98185 1.41729 1.13861 1.24315 1.33333 1.23549 0.98561 0.99750 0.96324 0.90441 0.87915 0.90515 0.90066 0.89779 0.89995 0.89453 0.77343 0.91463 0.90065 0.90597 0.86883 0.77722 1.18513 1.17774 0.88525 0.89977 0.89502 0.74721 0.89610 0.90272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 10.76 101.05 1.09 1.27 16 2 S -0.26 -0.19 22.37 -107.50 -2.40 -2.60 16 3 C -0.07 0.13 5.78 37.16 0.21 0.34 16 4 C -0.09 0.16 3.66 -89.81 -0.33 -0.16 16 5 H 0.11 -0.10 8.13 -51.93 -0.42 -0.52 16 6 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 7 C 0.13 -0.11 4.24 -67.12 -0.28 -0.39 16 8 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 9 N -0.72 0.72 5.35 -54.33 -0.29 0.43 16 10 C 0.59 1.53 7.79 -12.85 -0.10 1.43 16 11 O -0.52 -3.25 14.40 5.20 0.07 -3.18 16 12 C -0.07 -0.11 7.06 -81.98 -0.58 -0.69 16 13 C -0.04 -0.13 6.15 -104.16 -0.64 -0.77 16 14 C -0.10 -0.35 9.43 36.01 0.34 -0.01 16 15 C -0.21 -0.22 5.32 -105.02 -0.56 -0.78 16 16 C -0.03 -0.02 3.06 36.01 0.11 0.09 16 17 O -0.53 -1.12 10.24 -35.23 -0.36 -1.48 16 18 Si 0.64 -0.35 27.72 -169.99 -4.71 -5.06 16 19 C 0.06 -0.09 6.81 -81.95 -0.56 -0.65 16 20 C -0.09 0.43 9.41 36.01 0.34 0.77 16 21 N -0.53 0.97 5.99 -5.69 -0.03 0.93 16 22 C -0.14 0.14 7.43 -25.92 -0.19 -0.05 16 23 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 24 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 25 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 26 H 0.08 -0.20 7.84 -51.92 -0.41 -0.60 16 27 H 0.08 -0.19 8.14 -51.92 -0.42 -0.62 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 30 H 0.39 -1.57 7.86 -40.82 -0.32 -1.89 16 31 H 0.07 0.27 8.14 -51.93 -0.42 -0.15 16 32 H 0.08 0.21 5.12 -51.93 -0.27 -0.06 16 33 H 0.08 0.36 6.48 -51.93 -0.34 0.03 16 34 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 35 H 0.37 -0.04 8.08 45.56 0.37 0.33 16 36 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 37 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 38 H 0.10 -0.63 8.14 -51.93 -0.42 -1.06 16 39 H 0.08 -0.56 8.14 -51.93 -0.42 -0.98 16 40 H 0.09 -0.44 2.71 -51.93 -0.14 -0.59 16 41 H 0.42 -2.19 8.19 -40.82 -0.33 -2.53 16 42 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 43 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 LS Contribution 353.66 15.07 5.33 5.33 Total: 0.00 -8.74 353.66 -10.23 -18.97 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -6.49 Total: -13.94 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -1.34 Total: 0.60 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.32 Total: 1.36 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.29 Total: -4.66 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -4.71 Total: -5.06 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -2.40 Total: -2.60 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -8.74 -10.23 -18.97 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534458_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.039 kcal (2) G-P(sol) polarization free energy of solvation -8.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds