Wall clock time and date at job start Sun Mar 7 2021 05:30:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.36000 * 116.99851 * 2 1 4 4 C 1.38556 * 120.06428 * 0.02562 * 3 2 1 5 5 C 1.38277 * 120.01945 * 179.72339 * 4 3 2 6 6 C 1.50699 * 119.92535 * 180.27600 * 5 4 3 7 7 O 1.42890 * 109.47003 * 65.23336 * 6 5 4 8 8 Si 1.86302 * 109.47151 * 185.23433 * 6 5 4 9 9 C 1.38213 * 120.15052 * 0.51250 * 5 4 3 10 10 C 1.38384 * 120.13261 * 359.48489 * 9 5 4 11 11 Cl 1.73599 * 120.00636 * 180.27931 * 10 9 5 12 12 C 1.38623 * 119.98012 * 0.25720 * 10 9 5 13 13 O 1.36020 * 120.07714 * 179.97438 * 12 10 9 14 14 C 1.42897 * 116.99521 * 90.00467 * 13 12 10 15 15 C 1.53002 * 109.47186 * 90.00099 * 14 13 12 16 16 C 1.50701 * 109.46959 * 209.99866 * 14 13 12 17 17 O 1.21287 * 120.00170 * 0.02562 * 16 14 13 18 18 N 1.34773 * 120.00064 * 179.97438 * 16 14 13 19 19 C 1.46508 * 119.99958 * 180.02562 * 18 16 14 20 20 H 1.08996 * 112.84709 * 25.33895 * 19 18 16 21 21 C 1.53780 * 113.61131 * 156.53478 * 19 18 16 22 22 C 1.53781 * 87.08255 * 139.98069 * 21 19 18 23 23 H 1.09000 * 113.61158 * 89.11252 * 22 21 19 24 24 C 1.52994 * 113.61684 * 219.93511 * 22 21 19 25 25 S 1.81396 * 109.47152 * 184.99983 * 24 22 21 26 26 C 1.81401 * 103.00035 * 179.97438 * 25 24 22 27 27 C 1.53777 * 113.61269 * 254.13652 * 19 18 16 28 28 H 1.09004 * 109.47381 * 59.99941 * 1 2 3 29 29 H 1.09007 * 109.47193 * 179.97438 * 1 2 3 30 30 H 1.08991 * 109.47298 * 299.99953 * 1 2 3 31 31 H 1.07998 * 119.99168 * 359.97438 * 4 3 2 32 32 H 1.09007 * 109.46925 * 305.23176 * 6 5 4 33 33 H 0.96703 * 114.00465 * 59.99725 * 7 6 5 34 34 H 1.48491 * 109.99877 * 179.97438 * 8 6 5 35 35 H 1.48498 * 109.99743 * 301.31904 * 8 6 5 36 36 H 1.08002 * 119.93516 * 179.77025 * 9 5 4 37 37 H 1.08997 * 109.47401 * 329.99714 * 14 13 12 38 38 H 1.09000 * 109.47019 * 60.00002 * 15 14 13 39 39 H 1.09001 * 109.46806 * 179.97438 * 15 14 13 40 40 H 1.09001 * 109.46799 * 299.99755 * 15 14 13 41 41 H 0.96995 * 120.00313 * 0.02562 * 18 16 14 42 42 H 1.09005 * 113.61507 * 254.52694 * 21 19 18 43 43 H 1.09000 * 113.61973 * 25.43157 * 21 19 18 44 44 H 1.09006 * 109.47107 * 304.99384 * 24 22 21 45 45 H 1.08994 * 109.47555 * 64.99456 * 24 22 21 46 46 H 1.08997 * 109.47564 * 180.02562 * 26 25 24 47 47 H 1.09007 * 109.47026 * 299.99933 * 26 25 24 48 48 H 1.09003 * 109.47413 * 59.99642 * 26 25 24 49 49 H 1.09000 * 113.62216 * 334.57485 * 27 19 18 50 50 H 1.09004 * 113.61010 * 105.47434 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2930 2.3746 0.0005 5 6 1.9217 3.6062 0.0063 6 6 1.1002 4.8696 0.0132 7 8 0.3683 4.9551 1.2374 8 14 2.2281 6.3445 -0.1404 9 6 3.3018 3.6812 0.0009 10 6 4.0604 2.5238 0.0004 11 17 5.7936 2.6218 0.0009 12 6 3.4358 1.2862 0.0000 13 8 4.1795 0.1473 -0.0010 14 6 4.5347 -0.3966 1.2717 15 6 3.4536 -1.3794 1.7260 16 6 5.8536 -1.1170 1.1598 17 8 6.4327 -1.1600 0.0950 18 7 6.3902 -1.7127 2.2432 19 6 7.6726 -2.4126 2.1344 20 1 8.2914 -2.0379 1.3191 21 6 8.4228 -2.5349 3.4712 22 6 8.8035 -3.9602 3.0371 23 1 9.7319 -4.0100 2.4682 24 6 8.7476 -4.9827 4.1739 25 16 9.3558 -6.5841 3.5772 26 6 9.2153 -7.6453 5.0416 27 6 7.5419 -3.9446 2.1549 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 0.2145 2.3191 0.0005 32 1 0.4046 4.8552 -0.8259 33 1 0.9247 4.9723 2.0281 34 1 1.4300 7.5967 -0.1355 35 1 3.2020 6.3579 0.9805 36 1 3.7892 4.6450 0.0017 37 1 4.6218 0.4098 1.9999 38 1 3.3666 -2.1858 0.9978 39 1 3.7248 -1.7946 2.6967 40 1 2.4997 -0.8583 1.8070 41 1 5.9273 -1.6780 3.0948 42 1 9.2761 -1.8619 3.5563 43 1 7.7694 -2.5039 4.3431 44 1 9.3719 -4.6420 5.0000 45 1 7.7184 -5.0895 4.5163 46 1 9.5596 -8.6501 4.7967 47 1 9.8281 -7.2378 5.8458 48 1 8.1745 -7.6857 5.3627 49 1 6.6471 -4.2998 2.6661 50 1 7.6849 -4.4081 1.1787 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534458_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:30:28 Heat of formation + Delta-G solvation = -85.311009 kcal Electronic energy + Delta-G solvation = -33636.274439 eV Core-core repulsion = 28977.531718 eV Total energy + Delta-G solvation = -4658.742721 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.115 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.00878 -41.26695 -39.90633 -39.24703 -38.82521 -37.80282 -36.96877 -35.06664 -33.09534 -31.52748 -31.35555 -30.43322 -29.58076 -28.53405 -26.73563 -26.72520 -25.76429 -23.79410 -23.49570 -22.67989 -21.60616 -20.68195 -19.74260 -18.76322 -18.54818 -18.33403 -17.69814 -17.56398 -17.14290 -16.80510 -16.44450 -16.38513 -16.21314 -16.04964 -15.99743 -15.74600 -15.61595 -15.31824 -14.81451 -14.71246 -14.64322 -14.31819 -14.18888 -13.99125 -13.82490 -13.66151 -13.45092 -13.42390 -13.37489 -13.21038 -12.93044 -12.87104 -12.72609 -12.62304 -12.45416 -12.13539 -12.11396 -11.88223 -11.78423 -11.58561 -11.48369 -11.35660 -10.88445 -10.73562 -10.68528 -10.10716 -9.87211 -9.42152 -8.70490 -4.92801 -0.34817 -0.02749 0.73610 0.85811 1.24014 1.45691 1.57109 1.66185 1.69092 1.91772 2.16416 2.22266 2.69230 3.30247 3.40787 3.46741 3.53445 3.57083 3.71888 3.72626 3.78663 3.80512 3.84214 3.95987 4.01381 4.04320 4.23866 4.30408 4.31275 4.31913 4.34407 4.36773 4.50891 4.53650 4.58898 4.69048 4.70164 4.71577 4.74746 4.77039 4.81085 4.83937 4.87159 4.99203 5.04199 5.07982 5.15907 5.21982 5.23597 5.53249 5.92167 6.32358 6.44346 6.48798 7.15041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.162 4.162 5 C -0.060 4.060 6 C -0.071 4.071 7 O -0.540 6.540 8 Si 0.746 3.254 9 C -0.137 4.137 10 C -0.024 4.024 11 Cl -0.050 7.050 12 C 0.054 3.946 13 O -0.308 6.308 14 C 0.073 3.927 15 C -0.161 4.161 16 C 0.516 3.484 17 O -0.562 6.562 18 N -0.700 5.700 19 C 0.118 3.882 20 H 0.091 0.909 21 C -0.115 4.115 22 C -0.090 4.090 23 H 0.090 0.910 24 C -0.056 4.056 25 S -0.330 6.330 26 C -0.110 4.110 27 C -0.140 4.140 28 H 0.067 0.933 29 H 0.118 0.882 30 H 0.072 0.928 31 H 0.162 0.838 32 H 0.139 0.861 33 H 0.388 0.612 34 H -0.294 1.294 35 H -0.279 1.279 36 H 0.155 0.845 37 H 0.102 0.898 38 H 0.058 0.942 39 H 0.100 0.900 40 H 0.080 0.920 41 H 0.418 0.582 42 H 0.085 0.915 43 H 0.114 0.886 44 H 0.095 0.905 45 H 0.096 0.904 46 H 0.102 0.898 47 H 0.086 0.914 48 H 0.086 0.914 49 H 0.099 0.901 50 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.801 0.647 7.509 8.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.181 4.181 5 C -0.061 4.061 6 C -0.181 4.181 7 O -0.348 6.348 8 Si 0.651 3.349 9 C -0.155 4.155 10 C -0.051 4.051 11 Cl -0.021 7.021 12 C 0.008 3.992 13 O -0.224 6.224 14 C 0.015 3.985 15 C -0.218 4.218 16 C 0.302 3.698 17 O -0.439 6.439 18 N -0.354 5.354 19 C 0.013 3.987 20 H 0.109 0.891 21 C -0.155 4.155 22 C -0.110 4.110 23 H 0.109 0.891 24 C -0.204 4.204 25 S -0.105 6.105 26 C -0.278 4.278 27 C -0.179 4.179 28 H 0.086 0.914 29 H 0.136 0.864 30 H 0.090 0.910 31 H 0.180 0.820 32 H 0.157 0.843 33 H 0.238 0.762 34 H -0.222 1.222 35 H -0.205 1.205 36 H 0.172 0.828 37 H 0.120 0.880 38 H 0.077 0.923 39 H 0.118 0.882 40 H 0.099 0.901 41 H 0.256 0.744 42 H 0.104 0.896 43 H 0.133 0.867 44 H 0.114 0.886 45 H 0.114 0.886 46 H 0.121 0.879 47 H 0.105 0.895 48 H 0.105 0.895 49 H 0.117 0.883 50 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -3.936 0.744 5.565 6.857 hybrid contribution -0.628 -0.019 2.372 2.454 sum -4.564 0.725 7.937 9.184 Atomic orbital electron populations 1.23458 0.76021 1.05896 1.02722 1.86218 1.23463 1.25142 1.87715 1.19218 0.90408 0.86185 0.96191 1.21319 1.01702 0.90025 1.05045 1.20122 0.92485 0.96020 0.97488 1.25100 1.02065 1.00418 0.90509 1.86595 1.36822 1.95438 1.15912 0.93973 0.77568 0.74127 0.89249 1.20938 0.93203 0.97253 1.04098 1.21096 0.85914 0.93688 1.04407 1.98416 1.08636 1.98463 1.96604 1.17806 0.87390 0.85374 1.08613 1.86257 1.69908 1.38138 1.28111 1.22337 0.92915 0.97447 0.85832 1.22248 0.98163 0.98891 1.02498 1.20626 0.86368 0.78620 0.84231 1.90739 1.63126 1.60509 1.29553 1.45746 1.22825 1.54804 1.12036 1.22466 0.84685 0.91754 0.99806 0.89132 1.23357 1.00686 0.94959 0.96512 1.22059 0.98823 0.94155 0.95969 0.89139 1.23363 1.04470 0.91868 1.00658 1.87362 1.87021 1.11646 1.24461 1.23395 1.05910 1.01558 0.96979 1.23557 0.98587 0.95518 1.00229 0.91446 0.86408 0.90970 0.82043 0.84319 0.76194 1.22182 1.20495 0.82832 0.88044 0.92321 0.88155 0.90128 0.74444 0.89626 0.86748 0.88604 0.88594 0.87905 0.89528 0.89502 0.88259 0.92726 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.31 -0.45 8.19 -79.69 -0.65 -1.11 16 3 C 0.13 0.31 6.54 22.56 0.15 0.46 16 4 C -0.16 0.27 8.67 22.35 0.19 0.46 16 5 C -0.06 0.13 5.35 -19.86 -0.11 0.02 16 6 C -0.07 0.30 2.80 71.24 0.20 0.50 16 7 O -0.54 1.18 12.83 -148.98 -1.91 -0.73 16 8 Si 0.75 -2.60 29.88 68.60 2.05 -0.55 16 9 C -0.14 -0.01 8.45 22.30 0.19 0.18 16 10 C -0.02 -0.11 6.33 22.40 0.14 0.03 16 11 Cl -0.05 -0.36 28.50 -2.72 -0.08 -0.44 16 12 C 0.05 0.33 5.56 22.58 0.13 0.46 16 13 O -0.31 -3.07 8.48 -67.36 -0.57 -3.64 16 14 C 0.07 0.25 3.20 29.85 0.10 0.34 16 15 C -0.16 0.27 9.00 71.98 0.65 0.92 16 16 C 0.52 3.52 7.23 87.66 0.63 4.15 16 17 O -0.56 -9.80 16.12 15.98 0.26 -9.54 16 18 N -0.70 0.87 5.25 -440.03 -2.31 -1.44 16 19 C 0.12 -0.01 4.21 45.51 0.19 0.18 16 20 H 0.09 0.53 7.50 -2.39 -0.02 0.52 16 21 C -0.12 0.71 7.39 31.12 0.23 0.94 16 22 C -0.09 0.25 3.65 -10.21 -0.04 0.21 16 23 H 0.09 0.03 8.13 -2.39 -0.02 0.01 16 24 C -0.06 0.21 5.78 71.98 0.42 0.63 16 25 S -0.33 -0.82 22.37 -56.49 -1.26 -2.09 16 26 C -0.11 0.34 10.76 113.37 1.22 1.56 16 27 C -0.14 0.06 7.45 31.18 0.23 0.29 16 28 H 0.07 -0.50 7.66 -2.38 -0.02 -0.52 16 29 H 0.12 -1.03 8.14 -2.38 -0.02 -1.05 16 30 H 0.07 -0.63 7.66 -2.39 -0.02 -0.65 16 31 H 0.16 -0.88 6.30 -2.91 -0.02 -0.89 16 32 H 0.14 -0.94 7.96 -2.38 -0.02 -0.96 16 33 H 0.39 -2.92 8.70 -74.06 -0.64 -3.57 16 34 H -0.29 -1.11 7.11 99.48 0.71 -0.40 16 35 H -0.28 -0.09 7.01 99.48 0.70 0.61 16 36 H 0.15 -0.42 4.83 -2.91 -0.01 -0.43 16 37 H 0.10 -0.04 7.91 -2.39 -0.02 -0.06 16 38 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 39 H 0.10 -0.83 7.56 -2.39 -0.02 -0.84 16 40 H 0.08 -0.14 6.28 -2.39 -0.01 -0.15 16 41 H 0.42 -3.63 8.13 -92.71 -0.75 -4.38 16 42 H 0.09 -0.52 8.14 -2.38 -0.02 -0.54 16 43 H 0.11 -1.23 8.07 -2.39 -0.02 -1.25 16 44 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 45 H 0.10 -0.60 7.86 -2.39 -0.02 -0.62 16 46 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 47 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 48 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 49 H 0.10 -0.28 7.91 -2.39 -0.02 -0.30 16 50 H 0.05 0.25 8.14 -2.38 -0.02 0.23 16 Total: 0.00 -24.93 435.50 0.77 -24.16 By element: Atomic # 1 Polarization: -16.59 SS G_CDS: -0.38 Total: -16.97 kcal Atomic # 6 Polarization: 6.71 SS G_CDS: 5.63 Total: 12.35 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -2.31 Total: -1.44 kcal Atomic # 8 Polarization: -12.15 SS G_CDS: -2.88 Total: -15.03 kcal Atomic # 14 Polarization: -2.60 SS G_CDS: 2.05 Total: -0.55 kcal Atomic # 16 Polarization: -0.82 SS G_CDS: -1.26 Total: -2.09 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.08 Total: -0.44 kcal Total: -24.93 0.77 -24.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534458_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.149 kcal (2) G-P(sol) polarization free energy of solvation -24.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.162 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds