Wall clock time and date at job start Sun Mar 7 2021 05:30:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 C 1.81400 * 103.00288 * 2 1 4 4 C 1.52996 * 109.47097 * 180.02562 * 3 2 1 5 5 H 1.08995 * 112.84837 * 316.19102 * 4 3 2 6 6 C 1.53777 * 113.61553 * 87.50731 * 4 3 2 7 7 C 1.53774 * 87.08178 * 139.97906 * 6 4 3 8 8 H 1.09001 * 113.69016 * 89.12830 * 7 6 4 9 9 N 1.46506 * 113.61016 * 220.01422 * 7 6 4 10 10 C 1.34773 * 119.99968 * 252.49438 * 9 7 6 11 11 O 1.21283 * 120.00360 * 359.73034 * 10 9 7 12 12 C 1.50706 * 120.00081 * 180.02562 * 10 9 7 13 13 O 1.42894 * 109.47263 * 179.72605 * 12 10 9 14 14 C 1.35898 * 116.99879 * 179.97438 * 13 12 10 15 15 C 1.38734 * 120.05666 * 359.72678 * 14 13 12 16 16 C 1.38146 * 119.94191 * 179.74570 * 15 14 13 17 17 C 1.38261 * 120.05911 * 0.50524 * 16 15 14 18 18 C 1.50694 * 119.94688 * 179.74522 * 17 16 15 19 19 O 1.42901 * 109.47172 * 120.02723 * 18 17 16 20 20 Si 1.86296 * 109.47134 * 0.02562 * 18 17 16 21 21 C 1.38271 * 120.10839 * 359.77152 * 17 16 15 22 22 C 1.38144 * 120.05655 * 359.97438 * 21 17 16 23 23 C 1.53773 * 87.08241 * 334.56489 * 7 6 4 24 24 H 1.09005 * 109.47449 * 59.99893 * 1 2 3 25 25 H 1.09004 * 109.47452 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.47437 * 300.00049 * 1 2 3 27 27 H 1.09003 * 109.46665 * 59.99762 * 3 2 1 28 28 H 1.09000 * 109.46837 * 300.00481 * 3 2 1 29 29 H 1.08997 * 113.62021 * 25.42099 * 6 4 3 30 30 H 1.09005 * 113.60822 * 254.52763 * 6 4 3 31 31 H 0.96998 * 119.99507 * 72.50293 * 9 7 6 32 32 H 1.09001 * 109.46564 * 299.73030 * 12 10 9 33 33 H 1.08998 * 109.47012 * 59.72084 * 12 10 9 34 34 H 1.08002 * 120.02646 * 359.97438 * 15 14 13 35 35 H 1.08001 * 119.96800 * 180.22932 * 16 15 14 36 36 H 1.08998 * 109.47471 * 240.02280 * 18 17 16 37 37 H 0.96711 * 113.99575 * 299.99662 * 19 18 17 38 38 H 1.48498 * 110.00381 * 58.67926 * 20 18 17 39 39 H 1.48499 * 110.00238 * 179.97438 * 20 18 17 40 40 H 1.08005 * 119.96796 * 179.97438 * 21 17 16 41 41 H 1.08003 * 120.02339 * 179.97438 * 22 21 17 42 42 H 1.09004 * 113.61475 * 139.98321 * 23 7 6 43 43 H 1.09007 * 113.61441 * 270.88416 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 6 3.7424 1.9398 -0.0006 5 1 4.2448 1.2672 0.6944 6 6 4.3607 1.9485 -1.4086 7 6 5.2867 3.0701 -0.9095 8 1 6.2131 2.7075 -0.4639 9 7 5.5069 4.1314 -1.8951 10 6 6.6976 4.2365 -2.5177 11 8 7.5885 3.4555 -2.2584 12 6 6.9242 5.3286 -3.5312 13 8 8.2554 5.2353 -4.0423 14 6 8.6242 6.1533 -4.9740 15 6 7.7217 7.1205 -5.3918 16 6 8.1008 8.0558 -6.3352 17 6 9.3752 8.0222 -6.8705 18 6 9.7842 9.0402 -7.9035 19 8 10.8998 9.7898 -7.4180 20 14 8.3594 10.1930 -8.2376 21 6 10.2747 7.0557 -6.4599 22 6 9.9022 6.1214 -5.5130 23 6 4.1963 3.4040 0.1221 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 1.8032 2.2371 0.8900 28 1 1.8031 2.2371 -0.8900 29 1 3.6686 2.2678 -2.1876 30 1 4.8868 1.0275 -1.6600 31 1 4.7956 4.7585 -2.0995 32 1 6.2123 5.2185 -4.3492 33 1 6.7846 6.2997 -3.0563 34 1 6.7247 7.1445 -4.9773 35 1 7.3997 8.8112 -6.6580 36 1 10.0629 8.5303 -8.8257 37 1 10.7234 10.2708 -6.5977 38 1 7.9491 10.8708 -6.9816 39 1 8.7502 11.2023 -9.2544 40 1 11.2695 7.0313 -6.8798 41 1 10.6051 5.3665 -5.1929 42 1 4.5896 3.6581 1.1065 43 1 3.4591 4.1215 -0.2384 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534458_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:30:52 Heat of formation + Delta-G solvation = -49.774232 kcal Electronic energy + Delta-G solvation = -23803.603236 eV Core-core repulsion = 20135.958727 eV Total energy + Delta-G solvation = -3667.644508 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.123 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.64841 -41.02374 -39.72648 -38.82547 -37.21422 -34.94345 -32.45462 -31.78771 -31.03688 -29.93548 -29.21097 -26.88904 -26.27711 -24.45464 -23.55857 -22.34302 -21.72044 -20.77904 -19.54914 -18.51380 -18.15148 -17.73363 -17.48893 -17.02031 -16.83571 -16.47284 -16.32496 -16.13246 -15.75604 -15.60155 -15.18098 -15.08115 -14.79678 -14.68342 -14.36611 -14.32568 -13.97934 -13.74649 -13.64433 -13.59526 -13.50528 -13.44638 -12.98151 -12.30408 -12.23572 -12.17729 -12.11469 -11.71683 -11.64856 -11.58499 -10.96698 -10.88894 -10.60093 -10.18582 -10.06002 -9.24244 -8.68759 -4.99253 0.26747 0.28027 0.62973 1.27345 1.41219 1.43651 1.56377 1.57050 1.94622 2.51673 2.63540 3.25521 3.36769 3.37675 3.41391 3.57665 3.62304 3.66770 3.70829 3.84026 3.85052 3.86691 4.10317 4.11728 4.14521 4.17575 4.24596 4.37785 4.42165 4.49888 4.52259 4.60018 4.63334 4.66615 4.70922 4.83707 4.93252 4.93951 5.10171 5.12992 5.22925 5.39216 5.48242 5.66175 6.19555 6.33844 6.40405 7.04954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.261 6.261 3 C -0.073 4.073 4 C -0.093 4.093 5 H 0.105 0.895 6 C -0.143 4.143 7 C 0.124 3.876 8 H 0.120 0.880 9 N -0.718 5.718 10 C 0.516 3.484 11 O -0.511 6.511 12 C 0.039 3.961 13 O -0.288 6.288 14 C 0.134 3.866 15 C -0.207 4.207 16 C -0.075 4.075 17 C -0.156 4.156 18 C -0.070 4.070 19 O -0.530 6.530 20 Si 0.682 3.318 21 C -0.051 4.051 22 C -0.145 4.145 23 C -0.135 4.135 24 H 0.076 0.924 25 H 0.102 0.898 26 H 0.076 0.924 27 H 0.084 0.916 28 H 0.082 0.918 29 H 0.088 0.912 30 H 0.079 0.921 31 H 0.402 0.598 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.131 0.869 35 H 0.130 0.870 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.135 0.865 41 H 0.136 0.864 42 H 0.081 0.919 43 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.568 2.577 0.231 7.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.292 4.292 2 S -0.035 6.035 3 C -0.222 4.222 4 C -0.113 4.113 5 H 0.123 0.877 6 C -0.182 4.182 7 C 0.020 3.980 8 H 0.138 0.862 9 N -0.371 5.371 10 C 0.301 3.699 11 O -0.384 6.384 12 C -0.039 4.039 13 O -0.200 6.200 14 C 0.089 3.911 15 C -0.225 4.225 16 C -0.093 4.093 17 C -0.156 4.156 18 C -0.180 4.180 19 O -0.337 6.337 20 Si 0.583 3.417 21 C -0.069 4.069 22 C -0.164 4.164 23 C -0.175 4.175 24 H 0.095 0.905 25 H 0.121 0.879 26 H 0.095 0.905 27 H 0.102 0.898 28 H 0.100 0.900 29 H 0.106 0.894 30 H 0.097 0.903 31 H 0.237 0.763 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.149 0.851 35 H 0.147 0.853 36 H 0.136 0.864 37 H 0.223 0.777 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.153 0.847 41 H 0.154 0.846 42 H 0.100 0.900 43 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -6.134 1.538 -0.017 6.324 hybrid contribution -0.840 1.779 0.803 2.125 sum -6.974 3.318 0.787 7.763 Atomic orbital electron populations 1.23401 0.94074 1.06784 1.04909 1.87102 1.07433 1.10952 1.98035 1.23383 0.99027 0.94794 1.04954 1.22105 0.92745 0.97442 0.98967 0.87668 1.23557 0.98550 0.99667 0.96432 1.22547 0.98666 0.87742 0.89080 0.86248 1.45799 1.14518 1.33913 1.42838 1.20078 0.82697 0.85338 0.81783 1.90792 1.42355 1.42474 1.62806 1.22487 0.84917 0.99098 0.97436 1.86177 1.29512 1.50562 1.53758 1.19086 0.94057 0.88695 0.89280 1.21165 1.00191 0.98241 1.02937 1.20780 0.95344 0.97825 0.95314 1.20200 0.94805 0.99437 1.01182 1.24957 0.98168 0.96882 0.97993 1.86603 1.36124 1.65617 1.45322 0.95132 0.82624 0.81815 0.82086 1.20866 0.99414 0.92068 0.94540 1.20542 0.94464 1.01877 0.99509 1.23434 0.97698 0.96359 1.00035 0.90477 0.87925 0.90452 0.89760 0.89967 0.89372 0.90268 0.76295 0.88635 0.88749 0.85071 0.85267 0.86422 0.77674 1.18614 1.18245 0.84738 0.84614 0.89982 0.89201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.21 10.76 101.05 1.09 1.29 16 2 S -0.26 -0.12 22.37 -107.50 -2.40 -2.53 16 3 C -0.07 0.15 5.78 37.16 0.21 0.37 16 4 C -0.09 0.20 3.66 -89.81 -0.33 -0.12 16 5 H 0.11 -0.13 8.13 -51.93 -0.42 -0.56 16 6 C -0.14 0.23 7.43 -25.92 -0.19 0.03 16 7 C 0.12 -0.19 4.24 -67.12 -0.28 -0.48 16 8 H 0.12 0.06 7.46 -51.93 -0.39 -0.32 16 9 N -0.72 1.68 5.35 -53.02 -0.28 1.40 16 10 C 0.52 0.48 7.91 -10.98 -0.09 0.40 16 11 O -0.51 -3.13 16.10 -14.36 -0.23 -3.37 16 12 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 13 O -0.29 -0.73 9.67 -39.33 -0.38 -1.11 16 14 C 0.13 0.20 6.69 -39.22 -0.26 -0.06 16 15 C -0.21 0.13 9.04 -39.43 -0.36 -0.22 16 16 C -0.08 0.06 8.66 -39.61 -0.34 -0.28 16 17 C -0.16 -0.01 5.39 -104.60 -0.56 -0.58 16 18 C -0.07 0.02 2.82 36.00 0.10 0.13 16 19 O -0.53 -0.65 12.77 -35.23 -0.45 -1.10 16 20 Si 0.68 -0.84 29.78 -169.99 -5.06 -5.90 16 21 C -0.05 -0.04 9.60 -39.60 -0.38 -0.42 16 22 C -0.15 -0.23 9.99 -39.43 -0.39 -0.63 16 23 C -0.14 0.47 7.39 -25.92 -0.19 0.28 16 24 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 25 H 0.10 -0.20 8.14 -51.92 -0.42 -0.62 16 26 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 27 H 0.08 -0.22 8.14 -51.92 -0.42 -0.64 16 28 H 0.08 -0.23 7.84 -51.92 -0.41 -0.64 16 29 H 0.09 -0.20 7.89 -51.93 -0.41 -0.61 16 30 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.40 -2.29 8.73 -40.82 -0.36 -2.64 16 32 H 0.10 -0.39 7.65 -51.93 -0.40 -0.78 16 33 H 0.09 -0.37 7.68 -51.93 -0.40 -0.77 16 34 H 0.13 -0.45 6.30 -52.49 -0.33 -0.78 16 35 H 0.13 -0.36 4.87 -52.49 -0.26 -0.62 16 36 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.38 -0.58 8.70 45.56 0.40 -0.18 16 38 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 39 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 40 H 0.13 0.00 8.06 -52.48 -0.42 -0.42 16 41 H 0.14 0.17 8.06 -52.48 -0.42 -0.26 16 42 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.09 -0.44 8.08 -51.92 -0.42 -0.86 16 LS Contribution 371.08 15.07 5.59 5.59 Total: 0.00 -9.29 371.08 -11.39 -20.68 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -6.38 Total: -13.51 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -1.79 Total: -0.17 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.28 Total: 1.40 kcal Atomic # 8 Polarization: -4.51 SS G_CDS: -1.06 Total: -5.58 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.06 Total: -5.90 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -2.40 Total: -2.53 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -9.29 -11.39 -20.68 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534458_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.090 kcal (2) G-P(sol) polarization free energy of solvation -9.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds