Wall clock time and date at job start Sun Mar 7 2021 05:31:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35899 * 117.00000 * 2 1 4 4 C 1.38616 * 120.02465 * 180.22325 * 3 2 1 5 5 C 1.38658 * 119.88754 * 180.27339 * 4 3 2 6 6 O 1.35897 * 120.02362 * 179.77139 * 5 4 3 7 7 C 1.42899 * 117.00375 * 359.72898 * 6 5 4 8 8 C 1.50700 * 109.47143 * 179.97438 * 7 6 5 9 9 O 1.21283 * 119.99803 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99675 * 180.27800 * 8 7 6 11 11 C 1.46497 * 119.99525 * 179.72583 * 10 8 7 12 12 H 1.09001 * 112.85727 * 336.19659 * 11 10 8 13 13 C 1.53787 * 113.61668 * 107.50061 * 11 10 8 14 14 C 1.53781 * 87.08251 * 139.97598 * 13 11 10 15 15 H 1.08999 * 113.68742 * 89.12782 * 14 13 11 16 16 C 1.52997 * 113.61404 * 220.02018 * 14 13 11 17 17 S 1.81409 * 109.47074 * 272.49806 * 16 14 13 18 18 C 1.81401 * 102.99791 * 180.02562 * 17 16 14 19 19 C 1.53778 * 87.08300 * 334.57183 * 14 13 11 20 20 C 1.38753 * 119.94420 * 359.50445 * 5 4 3 21 21 C 1.50697 * 119.96994 * 180.27577 * 20 5 4 22 22 O 1.42895 * 109.47601 * 74.99456 * 21 20 5 23 23 Si 1.86300 * 109.46910 * 194.99568 * 21 20 5 24 24 C 1.38194 * 120.05277 * 0.24580 * 20 5 4 25 25 C 1.38148 * 120.11349 * 0.02562 * 24 20 5 26 26 H 1.08998 * 109.47570 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47497 * 300.00583 * 1 2 3 28 28 H 1.09002 * 109.46928 * 60.00083 * 1 2 3 29 29 H 1.07999 * 120.05707 * 0.02685 * 4 3 2 30 30 H 1.09009 * 109.46798 * 59.99546 * 7 6 5 31 31 H 1.08998 * 109.46844 * 300.00050 * 7 6 5 32 32 H 0.97000 * 119.99894 * 359.71837 * 10 8 7 33 33 H 1.08994 * 113.61696 * 254.52995 * 13 11 10 34 34 H 1.09001 * 113.61190 * 25.42986 * 13 11 10 35 35 H 1.08997 * 109.47381 * 32.49745 * 16 14 13 36 36 H 1.08996 * 109.47187 * 152.49986 * 16 14 13 37 37 H 1.09003 * 109.47172 * 60.00221 * 18 17 16 38 38 H 1.09001 * 109.46794 * 179.97438 * 18 17 16 39 39 H 1.08997 * 109.46915 * 300.00199 * 18 17 16 40 40 H 1.09002 * 113.61341 * 270.88560 * 19 14 13 41 41 H 1.08992 * 113.61647 * 139.98216 * 19 14 13 42 42 H 1.09005 * 109.46887 * 314.99337 * 21 20 5 43 43 H 0.96698 * 114.00088 * 59.99818 * 22 21 20 44 44 H 1.48503 * 109.99906 * 58.67914 * 23 21 20 45 45 H 1.48500 * 109.99991 * 179.97438 * 23 21 20 46 46 H 1.08003 * 119.94317 * 180.02562 * 24 20 5 47 47 H 1.08003 * 119.97300 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4302 1.2840 -0.0047 5 6 4.0567 2.5210 0.0011 6 8 5.4136 2.5959 0.0012 7 6 6.1316 1.3604 0.0013 8 6 7.6125 1.6400 0.0008 9 8 8.0135 2.7846 -0.0001 10 7 8.4912 0.6180 -0.0049 11 6 9.9307 0.8899 -0.0115 12 1 10.1742 1.8720 -0.4166 13 6 10.6212 0.5859 1.3286 14 6 11.7898 0.0160 0.5074 15 1 12.5433 0.7584 0.2445 16 6 12.3930 -1.2580 1.1022 17 16 13.6804 -0.8149 2.3011 18 6 14.2661 -2.4290 2.8860 19 6 10.7701 -0.2499 -0.6126 20 6 3.2971 3.6821 0.0011 21 6 3.9775 5.0267 0.0011 22 8 4.5038 5.2944 -1.3002 23 14 2.7440 6.3468 0.4556 24 6 1.9173 3.6064 0.0005 25 6 1.2906 2.3752 0.0005 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 4.0196 0.3791 -0.0088 30 1 5.8699 0.7880 -0.8888 31 1 5.8698 0.7881 0.8912 32 1 8.1704 -0.2974 -0.0046 33 1 10.8817 1.4781 1.8979 34 1 10.1022 -0.1628 1.9272 35 1 11.6120 -1.8305 1.6027 36 1 12.8302 -1.8594 0.3053 37 1 14.6566 -3.0008 2.0442 38 1 15.0556 -2.2836 3.6234 39 1 13.4385 -2.9725 3.3417 40 1 10.2918 -1.2270 -0.5447 41 1 11.1509 -0.0323 -1.6104 42 1 4.7899 5.0229 0.7278 43 1 3.8353 5.3128 -1.9987 44 1 2.1658 6.0626 1.7936 45 1 3.4027 7.6777 0.4597 46 1 1.3277 4.5114 0.0001 47 1 0.2121 2.3188 -0.0004 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534458_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:31:36 Heat of formation + Delta-G solvation = -82.776700 kcal Electronic energy + Delta-G solvation = -28551.227177 eV Core-core repulsion = 24407.931764 eV Total energy + Delta-G solvation = -4143.295414 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.82542 -41.18742 -40.16677 -39.30497 -38.12360 -36.82720 -34.87518 -32.27657 -31.58025 -30.83219 -29.87211 -29.07538 -28.49228 -26.84734 -26.05090 -24.39164 -23.17999 -22.45273 -21.65224 -20.73488 -19.94568 -18.52275 -17.96140 -17.91143 -17.55452 -17.47329 -17.17048 -16.76772 -16.74461 -16.47806 -16.39341 -15.89974 -15.60521 -15.47890 -15.12687 -15.05607 -14.76842 -14.61666 -14.37905 -14.31281 -13.93502 -13.77797 -13.59898 -13.56293 -13.47168 -13.40443 -13.18190 -12.98062 -12.54225 -12.23586 -12.14538 -12.02981 -11.73224 -11.67934 -11.64864 -11.54798 -10.94073 -10.81615 -10.20935 -10.12068 -9.69532 -9.07478 -8.66512 -4.96035 0.21129 0.33000 0.65381 1.41823 1.44771 1.51312 1.59381 1.73728 2.09793 2.14925 2.56243 2.59339 3.30037 3.41723 3.48382 3.62283 3.64112 3.67703 3.70979 3.80281 3.88764 3.92999 4.02038 4.03246 4.13183 4.13567 4.13944 4.17868 4.20029 4.24980 4.37201 4.40150 4.41183 4.51496 4.54185 4.64361 4.70378 4.72686 4.73978 4.88127 4.97756 5.03094 5.15198 5.22415 5.27529 5.42896 5.47051 6.11408 6.30017 6.39108 6.82115 7.12566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.248 4.248 5 C 0.192 3.808 6 O -0.272 6.272 7 C 0.036 3.964 8 C 0.517 3.483 9 O -0.507 6.507 10 N -0.718 5.718 11 C 0.125 3.875 12 H 0.120 0.880 13 C -0.144 4.144 14 C -0.093 4.093 15 H 0.105 0.895 16 C -0.073 4.073 17 S -0.262 6.262 18 C -0.123 4.123 19 C -0.135 4.135 20 C -0.185 4.185 21 C -0.051 4.051 22 O -0.533 6.533 23 Si 0.679 3.321 24 C -0.034 4.034 25 C -0.240 4.240 26 H 0.103 0.897 27 H 0.059 0.941 28 H 0.060 0.940 29 H 0.138 0.862 30 H 0.097 0.903 31 H 0.095 0.905 32 H 0.402 0.598 33 H 0.078 0.922 34 H 0.087 0.913 35 H 0.082 0.918 36 H 0.084 0.916 37 H 0.076 0.924 38 H 0.102 0.898 39 H 0.076 0.924 40 H 0.089 0.911 41 H 0.082 0.918 42 H 0.113 0.887 43 H 0.372 0.628 44 H -0.257 1.257 45 H -0.254 1.254 46 H 0.139 0.861 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.762 -6.938 -1.846 8.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.380 6.380 10 N -0.371 5.371 11 C 0.020 3.980 12 H 0.138 0.862 13 C -0.182 4.182 14 C -0.113 4.113 15 H 0.123 0.877 16 C -0.221 4.221 17 S -0.036 6.036 18 C -0.292 4.292 19 C -0.175 4.175 20 C -0.187 4.187 21 C -0.162 4.162 22 O -0.337 6.337 23 Si 0.581 3.419 24 C -0.052 4.052 25 C -0.258 4.258 26 H 0.121 0.879 27 H 0.078 0.922 28 H 0.078 0.922 29 H 0.156 0.844 30 H 0.114 0.886 31 H 0.113 0.887 32 H 0.237 0.763 33 H 0.097 0.903 34 H 0.106 0.894 35 H 0.100 0.900 36 H 0.102 0.898 37 H 0.096 0.904 38 H 0.121 0.879 39 H 0.095 0.905 40 H 0.108 0.892 41 H 0.100 0.900 42 H 0.131 0.869 43 H 0.219 0.781 44 H -0.182 1.182 45 H -0.179 1.179 46 H 0.156 0.844 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -3.555 -4.452 -0.613 5.730 hybrid contribution -0.390 -2.507 -0.042 2.538 sum -3.945 -6.960 -0.655 8.027 Atomic orbital electron populations 1.23148 0.77588 1.04422 1.01798 1.86075 1.22034 1.26672 1.88018 1.18680 0.91435 0.84401 0.92710 1.20394 0.92959 0.97324 1.16030 1.18412 0.82014 0.92454 0.92617 1.86268 1.14731 1.29625 1.87703 1.22535 0.90397 0.87122 1.04186 1.20041 0.87338 0.85764 0.76761 1.90806 1.79706 1.20830 1.46644 1.45791 1.06177 1.09002 1.76173 1.22536 0.77844 1.00369 0.97224 0.86246 1.23561 0.95738 1.02036 0.96907 1.22106 0.96115 0.96362 0.96673 0.87672 1.23383 0.98786 1.00556 0.99398 1.87102 1.47960 1.14329 1.54170 1.23398 1.04540 0.96761 1.04464 1.23430 0.96182 0.98880 0.99011 1.19606 0.92842 0.94527 1.11679 1.24852 1.04511 0.97575 0.89288 1.86600 1.37516 1.93567 1.16004 0.95361 0.83111 0.78091 0.85314 1.20591 0.92313 0.97352 0.94894 1.21129 1.00508 0.91752 1.12456 0.87900 0.92247 0.92166 0.84443 0.88565 0.88731 0.76332 0.90314 0.89419 0.89981 0.89753 0.90447 0.87939 0.90492 0.89217 0.89965 0.86916 0.78122 1.18210 1.17877 0.84360 0.84641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.26 10.49 -19.42 -0.20 -0.46 16 3 C 0.17 0.21 6.68 -39.24 -0.26 -0.06 16 4 C -0.25 -0.33 8.97 -39.29 -0.35 -0.68 16 5 C 0.19 0.51 6.66 -39.24 -0.26 0.25 16 6 O -0.27 -1.05 8.99 -39.33 -0.35 -1.40 16 7 C 0.04 0.00 5.22 36.01 0.19 0.19 16 8 C 0.52 1.09 7.91 -10.98 -0.09 1.01 16 9 O -0.51 -3.71 16.10 -14.36 -0.23 -3.95 16 10 N -0.72 0.94 5.35 -53.01 -0.28 0.65 16 11 C 0.12 -0.09 4.24 -67.11 -0.28 -0.37 16 12 H 0.12 0.17 7.46 -51.93 -0.39 -0.21 16 13 C -0.14 0.11 7.43 -25.92 -0.19 -0.08 16 14 C -0.09 0.14 3.66 -89.81 -0.33 -0.19 16 15 H 0.11 -0.07 8.13 -51.93 -0.42 -0.49 16 16 C -0.07 0.11 5.78 37.16 0.21 0.32 16 17 S -0.26 -0.26 22.37 -107.50 -2.40 -2.66 16 18 C -0.12 0.15 10.76 101.05 1.09 1.24 16 19 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 20 C -0.19 -0.36 5.27 -104.45 -0.55 -0.91 16 21 C -0.05 -0.13 2.37 36.00 0.09 -0.04 16 22 O -0.53 -1.70 12.88 -35.23 -0.45 -2.16 16 23 Si 0.68 0.27 29.91 -169.99 -5.08 -4.82 16 24 C -0.03 0.00 8.65 -39.63 -0.34 -0.34 16 25 C -0.24 0.03 9.04 -39.41 -0.36 -0.33 16 26 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 27 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 28 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 29 H 0.14 -0.08 6.30 -52.49 -0.33 -0.41 16 30 H 0.10 -0.23 7.65 -51.92 -0.40 -0.63 16 31 H 0.09 -0.23 7.67 -51.93 -0.40 -0.63 16 32 H 0.40 -1.84 8.73 -40.82 -0.36 -2.20 16 33 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 34 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 35 H 0.08 -0.18 7.84 -51.93 -0.41 -0.59 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 38 H 0.10 -0.16 8.14 -51.92 -0.42 -0.58 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 42 H 0.11 0.51 7.82 -51.93 -0.41 0.10 16 43 H 0.37 -0.52 8.70 45.56 0.40 -0.12 16 44 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 45 H -0.25 -0.97 7.11 56.52 0.40 -0.57 16 46 H 0.14 -0.40 5.12 -52.48 -0.27 -0.66 16 47 H 0.14 -0.33 6.29 -52.48 -0.33 -0.66 16 LS Contribution 400.16 15.07 6.03 6.03 Total: 0.00 -10.94 400.16 -10.72 -21.66 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -7.09 Total: -14.01 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -0.64 Total: 1.12 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.28 Total: 0.65 kcal Atomic # 8 Polarization: -6.73 SS G_CDS: -1.24 Total: -7.97 kcal Atomic # 14 Polarization: 0.27 SS G_CDS: -5.08 Total: -4.82 kcal Atomic # 16 Polarization: -0.26 SS G_CDS: -2.40 Total: -2.66 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -10.94 -10.72 -21.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534458_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.114 kcal (2) G-P(sol) polarization free energy of solvation -10.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds