Wall clock time and date at job start Sun Mar 7 2021 05:31:44
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 S 1.81400 * 1
3 3 C 1.81400 * 102.99864 * 2 1
4 4 C 1.52994 * 109.47478 * 179.97438 * 3 2 1
5 5 H 1.09001 * 112.84928 * 43.80230 * 4 3 2
6 6 C 1.53778 * 113.61813 * 174.99943 * 4 3 2
7 7 C 1.53778 * 87.08065 * 139.98172 * 6 4 3
8 8 H 1.09003 * 113.61508 * 89.20342 * 7 6 4
9 9 N 1.46506 * 113.61357 * 220.01679 * 7 6 4
10 10 C 1.34773 * 119.99968 * 203.46865 * 9 7 6
11 11 O 1.21283 * 120.00360 * 359.73034 * 10 9 7
12 12 C 1.50706 * 120.00081 * 180.02562 * 10 9 7
13 13 O 1.42894 * 109.47263 * 179.72605 * 12 10 9
14 14 C 1.35919 * 117.00174 * 179.97438 * 13 12 10
15 15 C 1.38789 * 120.06204 * 180.02562 * 14 13 12
16 16 Br 1.89098 * 120.03343 * 359.97438 * 15 14 13
17 17 C 1.38237 * 119.92602 * 180.02562 * 15 14 13
18 18 C 1.38238 * 120.04787 * 0.02562 * 17 15 14
19 19 C 1.50704 * 119.94096 * 179.97438 * 18 17 15
20 20 O 1.42902 * 109.46972 * 65.00276 * 19 18 17
21 21 Si 1.86302 * 109.47161 * 185.00036 * 19 18 17
22 22 C 1.38280 * 120.12013 * 359.96212 * 18 17 15
23 23 C 1.38153 * 120.06967 * 359.76202 * 22 18 17
24 24 C 1.53770 * 87.17681 * 334.60996 * 7 6 4
25 25 H 1.08997 * 109.46842 * 179.97438 * 1 2 3
26 26 H 1.08997 * 109.47621 * 300.00139 * 1 2 3
27 27 H 1.09000 * 109.47056 * 60.00286 * 1 2 3
28 28 H 1.09000 * 109.47233 * 59.99762 * 3 2 1
29 29 H 1.09003 * 109.47189 * 300.00171 * 3 2 1
30 30 H 1.09003 * 113.61449 * 25.43406 * 6 4 3
31 31 H 1.09005 * 113.69035 * 254.54050 * 6 4 3
32 32 H 0.96998 * 119.99507 * 23.47720 * 9 7 6
33 33 H 1.09001 * 109.46564 * 299.73030 * 12 10 9
34 34 H 1.08998 * 109.47012 * 59.72084 * 12 10 9
35 35 H 1.07997 * 119.97191 * 179.97438 * 17 15 14
36 36 H 1.09000 * 109.47454 * 305.00436 * 19 18 17
37 37 H 0.96700 * 113.99731 * 59.99551 * 20 19 18
38 38 H 1.48502 * 110.00025 * 180.02562 * 21 19 18
39 39 H 1.48502 * 109.99883 * 301.32385 * 21 19 18
40 40 H 1.08004 * 119.96775 * 180.02562 * 22 18 17
41 41 H 1.08003 * 120.02264 * 180.28049 * 23 22 18
42 42 H 1.09001 * 113.62107 * 139.94096 * 24 7 6
43 43 H 1.08998 * 113.61565 * 270.84488 * 24 7 6
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 16 1.8140 0.0000 0.0000
3 6 2.2220 1.7675 0.0000
4 6 3.7422 1.9401 0.0006
5 1 4.2448 1.2674 -0.6943
6 6 4.1961 3.4042 -0.1221
7 6 5.2865 3.0704 0.9095
8 1 6.2129 2.7079 0.4639
9 7 5.5066 4.1318 1.8951
10 6 6.6868 4.2181 2.5403
11 8 7.5648 3.4142 2.3086
12 6 6.9130 5.3096 3.5545
13 8 8.2276 5.1871 4.1010
14 6 8.5944 6.1015 5.0373
15 6 9.8574 6.0421 5.6097
16 35 11.0701 4.6882 5.0884
17 6 10.2273 6.9733 6.5622
18 6 9.3403 7.9622 6.9446
19 6 9.7459 8.9757 7.9835
20 8 10.8167 9.7748 7.4768
21 14 8.2918 10.0688 8.3857
22 6 8.0816 8.0233 6.3753
23 6 7.7088 7.0987 5.4189
24 6 4.3628 1.9473 1.4096
25 1 -0.3633 -1.0276 -0.0005
26 1 -0.3634 0.5138 0.8899
27 1 -0.3633 0.5138 -0.8900
28 1 1.8031 2.2371 0.8900
29 1 1.8030 2.2371 -0.8900
30 1 3.4589 4.1216 0.2384
31 1 4.5895 3.6598 -1.1061
32 1 4.8029 4.7723 2.0833
33 1 6.8092 6.2813 3.0717
34 1 6.1774 5.2208 4.3540
35 1 11.2097 6.9275 7.0084
36 1 10.0732 8.4597 8.8862
37 1 10.5960 10.2636 6.6721
38 1 8.6790 11.0731 9.4087
39 1 7.8160 10.7535 7.1568
40 1 7.3906 8.7972 6.6756
41 1 6.7271 7.1498 4.9715
42 1 4.8904 1.0270 1.6601
43 1 3.6712 2.2656 2.1896
There are 60 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 60
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990)
Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_16534458_6201210.mol2 43
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 05:31:44
Heat of formation + Delta-G solvation = -41.675470 kcal
Electronic energy + Delta-G solvation = -25932.166611 eV
Core-core repulsion = 21925.055289 eV
Total energy + Delta-G solvation = -4007.111323 eV
No. of doubly occupied orbitals = 60
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 402.033 amu
Computer time = 0.92 seconds
Orbital eigenvalues (eV)
-41.71910 -41.03647 -39.73175 -38.90769 -37.32658 -34.92496 -33.60627 -31.97126
-31.04499 -30.40622 -29.78385 -29.10561 -26.71334 -26.37161 -24.42732 -23.40547
-22.36810 -21.68954 -20.63605 -19.59147 -18.56160 -18.15884 -17.69340 -17.48474
-17.14371 -16.85162 -16.38148 -16.33551 -16.11153 -15.74590 -15.69307 -15.21610
-15.12926 -14.72702 -14.67385 -14.48553 -14.24136 -13.90779 -13.79809 -13.78003
-13.59013 -13.42790 -13.38127 -12.90315 -12.41416 -12.21328 -12.17702 -12.11177
-11.88962 -11.69006 -11.57527 -11.47658 -11.23729 -10.94234 -10.86949 -10.59776
-10.11395 -9.96788 -9.33095 -8.69981 -4.88719 -0.05267 0.12142 0.64431
0.74674 1.33857 1.44238 1.45848 1.62030 1.70014 2.01709 2.39197
2.53620 3.41074 3.41984 3.49516 3.56072 3.61145 3.73463 3.76090
3.78138 3.84357 4.03507 4.10605 4.12095 4.25141 4.31575 4.32573
4.33586 4.35513 4.55068 4.58486 4.65020 4.73416 4.77164 4.82898
4.85579 4.88147 5.00254 5.00548 5.06040 5.22254 5.23740 5.47922
5.55121 6.07321 6.48312 6.50977 7.16667
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.110 4.110
2 S -0.334 6.334
3 C -0.055 4.055
4 C -0.093 4.093
5 H 0.088 0.912
6 C -0.114 4.114
7 C 0.118 3.882
8 H 0.089 0.911
9 N -0.697 5.697
10 C 0.510 3.490
11 O -0.572 6.572
12 C 0.032 3.968
13 O -0.306 6.306
14 C 0.149 3.851
15 C -0.145 4.145
16 Br -0.056 7.056
17 C -0.035 4.035
18 C -0.149 4.149
19 C -0.085 4.085
20 O -0.551 6.551
21 Si 0.779 3.221
22 C -0.056 4.056
23 C -0.189 4.189
24 C -0.141 4.141
25 H 0.101 0.899
26 H 0.087 0.913
27 H 0.086 0.914
28 H 0.097 0.903
29 H 0.095 0.905
30 H 0.117 0.883
31 H 0.084 0.916
32 H 0.423 0.577
33 H 0.132 0.868
34 H 0.134 0.866
35 H 0.136 0.864
36 H 0.122 0.878
37 H 0.387 0.613
38 H -0.309 1.309
39 H -0.269 1.269
40 H 0.165 0.835
41 H 0.181 0.819
42 H 0.052 0.948
43 H 0.101 0.899
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -12.049 6.362 0.243 13.628
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.278 4.278
2 S -0.108 6.108
3 C -0.203 4.203
4 C -0.113 4.113
5 H 0.106 0.894
6 C -0.154 4.154
7 C 0.013 3.987
8 H 0.107 0.893
9 N -0.351 5.351
10 C 0.297 3.703
11 O -0.450 6.450
12 C -0.045 4.045
13 O -0.219 6.219
14 C 0.101 3.899
15 C -0.225 4.225
16 Br 0.029 6.971
17 C -0.055 4.055
18 C -0.151 4.151
19 C -0.193 4.193
20 O -0.359 6.359
21 Si 0.683 3.317
22 C -0.073 4.073
23 C -0.208 4.208
24 C -0.180 4.180
25 H 0.120 0.880
26 H 0.106 0.894
27 H 0.105 0.895
28 H 0.116 0.884
29 H 0.114 0.886
30 H 0.136 0.864
31 H 0.103 0.897
32 H 0.262 0.738
33 H 0.149 0.851
34 H 0.152 0.848
35 H 0.154 0.846
36 H 0.139 0.861
37 H 0.236 0.764
38 H -0.237 1.237
39 H -0.195 1.195
40 H 0.182 0.818
41 H 0.198 0.802
42 H 0.071 0.929
43 H 0.120 0.880
Dipole moment (debyes) X Y Z Total
from point charges -10.214 4.774 0.299 11.278
hybrid contribution -0.117 1.407 -0.731 1.590
sum -10.330 6.181 -0.432 12.046
Atomic orbital electron populations
1.23390 0.91461 1.07110 1.05842 1.87390 1.10523 1.14680 1.98209
1.23372 0.98660 0.92096 1.06169 1.22072 0.92821 0.98308 0.98058
0.89381 1.23351 0.96886 0.95672 0.99450 1.22431 0.97968 0.88314
0.89960 0.89335 1.45635 1.15261 1.32994 1.41206 1.20612 0.82462
0.85415 0.81856 1.90794 1.44877 1.43699 1.65617 1.22884 0.84238
0.99663 0.97728 1.86254 1.33317 1.49804 1.52509 1.18822 0.92533
0.89535 0.89021 1.21284 0.94387 1.00945 1.05887 1.96763 1.58732
1.50048 1.91543 1.20886 1.00068 0.91360 0.93180 1.20284 0.95101
0.98375 1.01309 1.25336 1.00438 0.96070 0.97482 1.86597 1.38557
1.63178 1.47595 0.94082 0.79605 0.79425 0.78583 1.21299 0.94934
0.97792 0.93305 1.21567 1.01442 0.95673 1.02068 1.23567 0.98597
0.98561 0.97247 0.87994 0.89422 0.89531 0.88419 0.88633 0.86427
0.89718 0.73828 0.85057 0.84847 0.84633 0.86060 0.76404 1.23738
1.19509 0.81808 0.80222 0.92937 0.88015
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.11 0.44 10.76 113.37 1.22 1.66 16
2 S -0.33 -0.49 22.37 -56.49 -1.26 -1.75 16
3 C -0.06 0.29 5.78 71.98 0.42 0.71 16
4 C -0.09 0.42 3.66 -10.21 -0.04 0.38 16
5 H 0.09 -0.08 8.13 -2.39 -0.02 -0.10 16
6 C -0.11 0.99 7.39 31.12 0.23 1.22 16
7 C 0.12 -0.37 4.21 45.51 0.19 -0.18 16
8 H 0.09 0.31 7.50 -2.39 -0.02 0.29 16
9 N -0.70 4.44 5.36 -440.04 -2.36 2.08 16
10 C 0.51 0.61 7.91 87.66 0.69 1.30 16
11 O -0.57 -8.11 16.12 16.00 0.26 -7.86 16
12 C 0.03 -0.19 5.22 71.24 0.37 0.18 16
13 O -0.31 -1.36 9.00 -73.61 -0.66 -2.02 16
14 C 0.15 0.29 6.68 22.52 0.15 0.44 16
15 C -0.15 -0.81 6.24 22.40 0.14 -0.67 16
16 Br -0.06 -0.56 33.16 -20.37 -0.68 -1.23 16
17 C -0.04 -0.09 9.42 22.27 0.21 0.12 16
18 C -0.15 0.32 5.35 -19.85 -0.11 0.21 16
19 C -0.09 0.24 2.80 71.24 0.20 0.44 16
20 O -0.55 -0.69 12.83 -148.98 -1.91 -2.61 16
21 Si 0.78 -4.59 29.88 68.60 2.05 -2.54 16
22 C -0.06 0.36 8.66 22.26 0.19 0.55 16
23 C -0.19 1.16 9.04 22.36 0.20 1.36 16
24 C -0.14 0.38 7.45 31.18 0.23 0.61 16
25 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16
26 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16
27 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16
28 H 0.10 -0.80 7.85 -2.39 -0.02 -0.81 16
29 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16
30 H 0.12 -1.63 8.07 -2.39 -0.02 -1.65 16
31 H 0.08 -0.70 8.14 -2.38 -0.02 -0.72 16
32 H 0.42 -6.38 8.71 -92.71 -0.81 -7.19 16
33 H 0.13 -1.72 7.65 -2.39 -0.02 -1.73 16
34 H 0.13 -1.77 7.67 -2.39 -0.02 -1.79 16
35 H 0.14 0.43 8.06 -2.91 -0.02 0.40 16
36 H 0.12 -0.43 7.96 -2.39 -0.02 -0.44 16
37 H 0.39 -1.83 8.70 -74.06 -0.64 -2.48 16
38 H -0.31 -0.99 7.11 99.48 0.71 -0.28 16
39 H -0.27 1.11 7.01 99.48 0.70 1.81 16
40 H 0.16 -1.98 4.83 -2.91 -0.01 -2.00 16
41 H 0.18 -2.64 6.30 -2.91 -0.02 -2.66 16
42 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16
43 H 0.10 -0.57 7.90 -2.39 -0.02 -0.59 16
Total: 0.00 -28.99 391.58 -0.63 -29.62
By element:
Atomic # 1 Polarization: -21.67 SS G_CDS: -0.37 Total: -22.04 kcal
Atomic # 6 Polarization: 4.03 SS G_CDS: 4.30 Total: 8.34 kcal
Atomic # 7 Polarization: 4.44 SS G_CDS: -2.36 Total: 2.08 kcal
Atomic # 8 Polarization: -10.16 SS G_CDS: -2.32 Total: -12.48 kcal
Atomic # 14 Polarization: -4.59 SS G_CDS: 2.05 Total: -2.54 kcal
Atomic # 16 Polarization: -0.49 SS G_CDS: -1.26 Total: -1.75 kcal
Atomic # 35 Polarization: -0.56 SS G_CDS: -0.68 Total: -1.23 kcal
Total: -28.99 -0.63 -29.62 kcal
The number of atoms in the molecule is 43
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_16534458_6201210.mol2 43
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -12.059 kcal
(2) G-P(sol) polarization free energy of solvation -28.985 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.045 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.631 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.616 kcal
(6) G-S(sol) free energy of system = (1) + (5) -41.675 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.92 seconds