Wall clock time and date at job start Sun Mar 7 2021 05:52:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42897 * 109.46977 * 2 1 4 4 C 1.35905 * 117.00108 * 275.32191 * 3 2 1 5 5 C 1.38724 * 120.05793 * 5.08889 * 4 3 2 6 6 C 1.38145 * 119.94764 * 179.73852 * 5 4 3 7 7 C 1.38267 * 120.05350 * 0.51449 * 6 5 4 8 8 C 1.50695 * 119.94505 * 179.74158 * 7 6 5 9 9 O 1.42903 * 109.46965 * 120.01629 * 8 7 6 10 10 Si 1.86302 * 109.47133 * 0.02562 * 8 7 6 11 11 C 1.38268 * 120.10968 * 359.75591 * 7 6 5 12 12 C 1.38145 * 120.05720 * 359.97438 * 11 7 6 13 13 C 1.50695 * 109.47365 * 119.99893 * 2 1 3 14 14 O 1.21278 * 120.00469 * 245.00395 * 13 2 1 15 15 N 1.34781 * 119.99438 * 64.72364 * 13 2 1 16 16 C 1.46502 * 119.99661 * 180.27588 * 15 13 2 17 17 H 1.09006 * 112.84914 * 336.19733 * 16 15 13 18 18 C 1.53784 * 113.61408 * 107.50622 * 16 15 13 19 19 C 1.53778 * 87.08016 * 89.11872 * 18 16 15 20 20 H 1.09007 * 113.60767 * 270.88299 * 19 18 16 21 21 C 1.52993 * 113.61679 * 139.98423 * 19 18 16 22 22 S 1.81408 * 109.47277 * 87.49699 * 21 19 18 23 23 C 1.81399 * 101.92177 * 180.02562 * 22 21 19 24 24 O 1.42099 * 108.57369 * 294.48904 * 22 21 19 25 25 O 1.42094 * 108.57444 * 65.51534 * 22 21 19 26 26 C 1.53781 * 87.08529 * 25.43147 * 19 18 16 27 27 H 1.08999 * 109.47127 * 60.00174 * 1 2 3 28 28 H 1.09001 * 109.46979 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.47025 * 300.00138 * 1 2 3 30 30 H 1.08998 * 109.46938 * 240.00410 * 2 1 3 31 31 H 1.08002 * 120.02535 * 359.97438 * 5 4 3 32 32 H 1.08000 * 119.97256 * 180.26845 * 6 5 4 33 33 H 1.08995 * 109.46961 * 240.01581 * 8 7 6 34 34 H 0.96700 * 113.99720 * 180.02562 * 9 8 7 35 35 H 1.48505 * 109.99620 * 298.67594 * 10 8 7 36 36 H 1.48502 * 110.00278 * 59.99693 * 10 8 7 37 37 H 1.08003 * 119.96939 * 180.02562 * 11 7 6 38 38 H 1.08003 * 120.02734 * 179.97438 * 12 11 7 39 39 H 0.96998 * 120.00172 * 0.28017 * 15 13 2 40 40 H 1.09002 * 113.61039 * 203.66645 * 18 16 15 41 41 H 1.08990 * 113.61230 * 334.56314 * 18 16 15 42 42 H 1.08992 * 109.47390 * 207.49882 * 21 19 18 43 43 H 1.09001 * 109.46919 * 327.50199 * 21 19 18 44 44 H 1.08997 * 109.47517 * 59.99685 * 23 22 21 45 45 H 1.08997 * 109.47341 * 180.02562 * 23 22 21 46 46 H 1.09006 * 109.47081 * 300.00101 * 23 22 21 47 47 H 1.08999 * 113.61638 * 220.02217 * 26 19 18 48 48 H 1.08991 * 113.61442 * 89.11888 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3305 -2.3529 6 6 1.7520 1.9641 -3.5765 7 6 2.3090 3.2269 -3.6599 8 6 2.4196 3.9135 -4.9968 9 8 1.6855 5.1392 -4.9649 10 14 1.7221 2.8065 -6.3230 11 6 2.7650 3.8606 -2.5187 12 6 2.6646 3.2335 -1.2920 13 6 2.0324 -0.7103 1.2304 14 8 2.6530 -0.0979 2.0734 15 7 1.7871 -2.0252 1.3967 16 6 2.2703 -2.7145 2.5958 17 1 3.1246 -2.2168 3.0548 18 6 1.1549 -3.0724 3.5921 19 6 1.0041 -4.3974 2.8264 20 1 0.2983 -4.3446 1.9973 21 6 0.7673 -5.6062 3.7339 22 16 -1.0101 -5.7874 4.0484 23 6 -1.0536 -7.2490 5.1218 24 8 -1.4542 -4.6637 4.7962 25 8 -1.6564 -6.1052 2.8235 26 6 2.4712 -4.2263 2.3984 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.2234 0.3423 -2.2889 32 1 1.3966 1.4712 -4.4693 33 1 3.4673 4.1230 -5.2121 34 1 1.7124 5.6354 -5.7945 35 1 2.4970 1.5413 -6.3879 36 1 0.2938 2.5135 -6.0409 37 1 3.1993 4.8472 -2.5865 38 1 3.0213 3.7287 -0.4010 39 1 1.2908 -2.5150 0.7225 40 1 1.5076 -3.1974 4.6159 41 1 0.2812 -2.4247 3.5205 42 1 1.1436 -6.5056 3.2466 43 1 1.2903 -5.4590 4.6788 44 1 -0.4770 -7.0533 6.0258 45 1 -2.0862 -7.4722 5.3901 46 1 -0.6237 -8.1004 4.5940 47 1 2.6599 -4.5102 1.3631 48 1 3.1836 -4.6668 3.0957 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:52:33 Heat of formation + Delta-G solvation = -106.982953 kcal Electronic energy + Delta-G solvation = -30955.776423 eV Core-core repulsion = 26492.749155 eV Total energy + Delta-G solvation = -4463.027268 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 2.40 seconds Orbital eigenvalues (eV) -41.90401 -41.13304 -39.80828 -38.74736 -38.03854 -37.20524 -37.07343 -35.02324 -33.34476 -31.95753 -31.71235 -31.11779 -30.38711 -26.97541 -26.75027 -25.73039 -24.49762 -23.87427 -22.44041 -21.53746 -20.58777 -19.97835 -19.52667 -18.63906 -18.34767 -17.87841 -17.51967 -17.22806 -17.06891 -16.89587 -16.73806 -16.67315 -15.97497 -15.84277 -15.72322 -15.44462 -15.27277 -15.06412 -14.56403 -14.43926 -14.35205 -14.30330 -14.24306 -13.97490 -13.77570 -13.68120 -13.53900 -13.41293 -13.20657 -13.12557 -13.03587 -12.94409 -12.65722 -12.44167 -12.34947 -12.11794 -12.06446 -11.90109 -11.82405 -11.57134 -11.25766 -10.85652 -10.32356 -10.24590 -10.03760 -9.17979 -4.99132 -1.15087 0.27742 0.29827 1.27530 1.39313 1.43323 1.61307 1.61649 1.94910 2.40763 2.50021 2.63249 2.83409 3.12750 3.17597 3.31301 3.38138 3.39906 3.51795 3.54637 3.67605 3.68272 3.71242 3.73394 3.80017 3.85531 3.93620 4.04681 4.19410 4.20818 4.27380 4.37340 4.44580 4.46938 4.50969 4.51154 4.53571 4.63300 4.66115 4.72297 4.85886 4.89821 4.91653 4.93334 5.17045 5.24008 5.36900 5.50696 5.67800 6.18668 6.34896 6.62959 7.03182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.066 3.934 3 O -0.282 6.282 4 C 0.135 3.865 5 C -0.206 4.206 6 C -0.082 4.082 7 C -0.113 4.113 8 C -0.066 4.066 9 O -0.546 6.546 10 Si 0.681 3.319 11 C -0.047 4.047 12 C -0.144 4.144 13 C 0.523 3.477 14 O -0.507 6.507 15 N -0.712 5.712 16 C 0.120 3.880 17 H 0.111 0.889 18 C -0.151 4.151 19 C -0.107 4.107 20 H 0.105 0.895 21 C -0.602 4.602 22 S 2.416 3.584 23 C -0.658 4.658 24 O -0.933 6.933 25 O -0.940 6.940 26 C -0.129 4.129 27 H 0.079 0.921 28 H 0.080 0.920 29 H 0.079 0.921 30 H 0.100 0.900 31 H 0.133 0.867 32 H 0.120 0.880 33 H 0.074 0.926 34 H 0.382 0.618 35 H -0.256 1.256 36 H -0.251 1.251 37 H 0.137 0.863 38 H 0.138 0.862 39 H 0.403 0.597 40 H 0.102 0.898 41 H 0.084 0.916 42 H 0.136 0.864 43 H 0.136 0.864 44 H 0.129 0.871 45 H 0.131 0.869 46 H 0.128 0.872 47 H 0.081 0.919 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.394 -5.057 -3.576 6.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.006 3.994 3 O -0.194 6.194 4 C 0.090 3.910 5 C -0.225 4.225 6 C -0.100 4.100 7 C -0.113 4.113 8 C -0.177 4.177 9 O -0.352 6.352 10 Si 0.583 3.417 11 C -0.065 4.065 12 C -0.162 4.162 13 C 0.308 3.692 14 O -0.380 6.380 15 N -0.365 5.365 16 C 0.015 3.985 17 H 0.129 0.871 18 C -0.190 4.190 19 C -0.126 4.126 20 H 0.123 0.877 21 C -0.731 4.731 22 S 2.598 3.402 23 C -0.808 4.808 24 O -0.930 6.930 25 O -0.937 6.937 26 C -0.168 4.168 27 H 0.098 0.902 28 H 0.099 0.901 29 H 0.098 0.902 30 H 0.118 0.882 31 H 0.151 0.849 32 H 0.138 0.862 33 H 0.092 0.908 34 H 0.229 0.771 35 H -0.181 1.181 36 H -0.176 1.176 37 H 0.154 0.846 38 H 0.156 0.844 39 H 0.238 0.762 40 H 0.120 0.880 41 H 0.103 0.897 42 H 0.155 0.845 43 H 0.155 0.845 44 H 0.148 0.852 45 H 0.149 0.851 46 H 0.147 0.853 47 H 0.099 0.901 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 1.695 -4.989 -2.617 5.883 hybrid contribution 0.495 -1.134 0.412 1.305 sum 2.190 -6.123 -2.205 6.866 Atomic orbital electron populations 1.22378 0.92124 1.04080 1.05096 1.22188 0.96066 0.83312 0.97846 1.86230 1.80885 1.25352 1.26963 1.19047 0.95233 0.92885 0.83844 1.21142 1.07318 1.01747 0.92268 1.20632 0.97785 0.94748 0.96832 1.19265 1.02746 0.94739 0.94555 1.24606 0.99427 0.92791 1.00896 1.86498 1.73999 1.34274 1.40472 0.95347 0.80371 0.80054 0.85931 1.20844 0.96159 0.99126 0.90382 1.20553 1.03167 0.93484 0.99029 1.20068 0.79734 0.82036 0.87406 1.90778 1.38519 1.65364 1.43328 1.45532 1.58421 1.09076 1.23490 1.21844 0.98070 0.92660 0.85953 0.87088 1.23657 1.00327 0.95703 0.99299 1.22376 0.99607 0.92470 0.98190 0.87735 1.30312 1.25930 1.07294 1.09526 1.07983 0.78295 0.77351 0.76536 1.30295 1.12162 1.21423 1.16894 1.93627 1.78882 1.47952 1.72576 1.93615 1.72006 1.84891 1.43188 1.23348 0.95553 0.94729 1.03187 0.90223 0.90089 0.90198 0.88227 0.84947 0.86235 0.90819 0.77066 1.18102 1.17584 0.84554 0.84407 0.76243 0.87990 0.89731 0.84527 0.84550 0.85235 0.85083 0.85310 0.90060 0.87815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.18 9.12 37.16 0.34 0.52 16 2 C 0.07 0.05 2.64 -27.88 -0.07 -0.03 16 3 O -0.28 -1.14 9.34 -39.30 -0.37 -1.51 16 4 C 0.14 0.45 6.60 -39.22 -0.26 0.20 16 5 C -0.21 -0.41 8.23 -39.44 -0.32 -0.73 16 6 C -0.08 -0.21 8.66 -39.60 -0.34 -0.55 16 7 C -0.11 -0.30 5.42 -104.60 -0.57 -0.87 16 8 C -0.07 -0.01 2.81 36.00 0.10 0.09 16 9 O -0.55 -0.24 12.74 -35.23 -0.45 -0.69 16 10 Si 0.68 -0.65 29.78 -169.99 -5.06 -5.71 16 11 C -0.05 -0.12 9.60 -39.60 -0.38 -0.50 16 12 C -0.14 -0.45 9.99 -39.43 -0.39 -0.85 16 13 C 0.52 1.15 7.18 -10.99 -0.08 1.07 16 14 O -0.51 -3.47 16.11 -14.30 -0.23 -3.70 16 15 N -0.71 0.83 5.22 -53.01 -0.28 0.55 16 16 C 0.12 -0.14 4.32 -67.11 -0.29 -0.43 16 17 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 18 C -0.15 0.20 7.43 -25.92 -0.19 0.01 16 19 C -0.11 0.32 3.53 -89.81 -0.32 0.01 16 20 H 0.10 -0.34 8.13 -51.93 -0.42 -0.76 16 21 C -0.60 2.92 5.64 37.15 0.21 3.13 16 22 S 2.42 -4.98 5.35 -107.50 -0.58 -5.56 16 23 C -0.66 3.10 10.62 101.05 1.07 4.18 16 24 O -0.93 -1.93 18.10 -57.83 -1.05 -2.98 16 25 O -0.94 -1.85 18.10 -57.83 -1.05 -2.90 16 26 C -0.13 0.47 7.39 -25.92 -0.19 0.28 16 27 H 0.08 -0.08 6.91 -51.93 -0.36 -0.44 16 28 H 0.08 -0.28 7.91 -51.93 -0.41 -0.69 16 29 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 31 H 0.13 -0.08 5.43 -52.49 -0.29 -0.37 16 32 H 0.12 0.19 4.87 -52.49 -0.26 -0.06 16 33 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 34 H 0.38 -1.76 8.74 45.56 0.40 -1.36 16 35 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 36 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 37 H 0.14 0.15 8.06 -52.48 -0.42 -0.27 16 38 H 0.14 0.31 8.06 -52.48 -0.42 -0.11 16 39 H 0.40 -1.63 8.47 -40.82 -0.35 -1.98 16 40 H 0.10 -0.23 7.90 -51.93 -0.41 -0.64 16 41 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.14 -0.97 8.14 -51.93 -0.42 -1.39 16 43 H 0.14 -0.93 7.84 -51.92 -0.41 -1.34 16 44 H 0.13 -0.82 8.14 -51.93 -0.42 -1.25 16 45 H 0.13 -0.57 8.14 -51.93 -0.42 -0.99 16 46 H 0.13 -0.83 8.14 -51.92 -0.42 -1.25 16 47 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 48 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 LS Contribution 407.29 15.07 6.14 6.14 Total: 0.00 -16.01 407.29 -11.65 -27.66 By element: Atomic # 1 Polarization: -9.77 SS G_CDS: -7.05 Total: -16.82 kcal Atomic # 6 Polarization: 7.20 SS G_CDS: -1.69 Total: 5.51 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.28 Total: 0.55 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -3.14 Total: -11.78 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.06 Total: -5.71 kcal Atomic # 16 Polarization: -4.98 SS G_CDS: -0.58 Total: -5.56 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -16.01 -11.65 -27.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.324 kcal (2) G-P(sol) polarization free energy of solvation -16.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.40 seconds