Wall clock time and date at job start Sun Mar 7 2021 05:56:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35985 * 117.00335 * 2 1 4 4 C 1.38553 * 120.06886 * 359.97438 * 3 2 1 5 5 C 1.38274 * 120.02514 * 179.97438 * 4 3 2 6 6 C 1.50699 * 119.92382 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.47356 * 65.00143 * 6 5 4 8 8 Si 1.86305 * 109.47030 * 184.99750 * 6 5 4 9 9 C 1.38209 * 120.15193 * 0.02562 * 5 4 3 10 10 C 1.38377 * 120.13227 * 359.75091 * 9 5 4 11 11 Cl 1.73601 * 120.01098 * 180.27177 * 10 9 5 12 12 C 1.38623 * 119.97996 * 0.48209 * 10 9 5 13 13 O 1.36015 * 120.07871 * 179.79483 * 12 10 9 14 14 C 1.42900 * 117.00088 * 269.72315 * 13 12 10 15 15 C 1.53006 * 109.47082 * 269.99890 * 14 13 12 16 16 C 1.50698 * 109.47662 * 149.99825 * 14 13 12 17 17 O 1.21282 * 119.99364 * 5.00353 * 16 14 13 18 18 N 1.34774 * 120.00600 * 184.99879 * 16 14 13 19 19 C 1.46496 * 120.00099 * 180.02562 * 18 16 14 20 20 H 1.08994 * 112.91109 * 23.75176 * 19 18 16 21 21 C 1.53787 * 113.61210 * 155.00440 * 19 18 16 22 22 C 1.53778 * 87.08035 * 89.11438 * 21 19 18 23 23 H 1.09004 * 113.61682 * 270.87724 * 22 21 19 24 24 C 1.53003 * 113.61196 * 140.06532 * 22 21 19 25 25 S 1.81399 * 109.47047 * 174.99623 * 24 22 21 26 26 C 1.81402 * 101.92047 * 179.97438 * 25 24 22 27 27 O 1.42093 * 108.57891 * 294.48806 * 25 24 22 28 28 O 1.42106 * 108.57994 * 65.51370 * 25 24 22 29 29 C 1.53778 * 87.08449 * 25.43264 * 22 21 19 30 30 H 1.09000 * 109.46725 * 59.99578 * 1 2 3 31 31 H 1.08991 * 109.47416 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.46716 * 299.99923 * 1 2 3 33 33 H 1.08009 * 119.98865 * 0.02562 * 4 3 2 34 34 H 1.08996 * 109.47142 * 304.99496 * 6 5 4 35 35 H 0.96704 * 114.00286 * 59.99517 * 7 6 5 36 36 H 1.48502 * 109.99832 * 58.68083 * 8 6 5 37 37 H 1.48495 * 109.99953 * 179.97438 * 8 6 5 38 38 H 1.08007 * 119.93541 * 179.97438 * 9 5 4 39 39 H 1.09003 * 109.47054 * 29.99940 * 14 13 12 40 40 H 1.09000 * 109.46802 * 60.00221 * 15 14 13 41 41 H 1.08996 * 109.47018 * 179.97438 * 15 14 13 42 42 H 1.08996 * 109.46901 * 299.99718 * 15 14 13 43 43 H 0.97002 * 119.99411 * 0.02562 * 18 16 14 44 44 H 1.08998 * 113.61103 * 203.66698 * 21 19 18 45 45 H 1.08997 * 113.61087 * 334.48007 * 21 19 18 46 46 H 1.08994 * 109.47311 * 294.99941 * 24 22 21 47 47 H 1.08999 * 109.47124 * 54.99885 * 24 22 21 48 48 H 1.08996 * 109.46951 * 60.00435 * 26 25 24 49 49 H 1.09000 * 109.47066 * 179.97438 * 26 25 24 50 50 H 1.09001 * 109.47331 * 300.00277 * 26 25 24 51 51 H 1.08993 * 113.61229 * 220.02023 * 29 22 21 52 52 H 1.09000 * 113.61263 * 89.11673 * 29 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 -0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8695 0.0000 7 8 0.3632 4.9583 1.2208 8 14 2.2293 6.3440 -0.1522 9 6 3.3021 3.6809 0.0005 10 6 4.0606 2.5235 0.0057 11 17 5.7938 2.6213 0.0135 12 6 3.4360 1.2860 0.0003 13 8 4.1796 0.1471 0.0012 14 6 4.5347 -0.3968 -1.2716 15 6 3.4536 -1.3795 -1.7259 16 6 5.8536 -1.1173 -1.1598 17 8 6.3880 -1.2393 -0.0779 18 7 6.4391 -1.6263 -2.2618 19 6 7.7209 -2.3272 -2.1529 20 1 7.8996 -2.7325 -1.1571 21 6 7.9670 -3.3402 -3.2836 22 6 8.6051 -2.1850 -4.0731 23 1 7.8931 -1.6246 -4.6791 24 6 9.8567 -2.5933 -4.8526 25 16 10.4290 -1.1931 -5.8538 26 6 11.8897 -1.8903 -6.6728 27 8 9.4469 -0.9113 -6.8414 28 8 10.8525 -0.1551 -4.9806 29 6 8.9090 -1.5293 -2.7157 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 0.2147 2.3192 -0.0005 34 1 0.4089 4.8531 -0.8421 35 1 0.9162 4.9774 2.0139 36 1 3.0251 6.2475 -1.4023 37 1 1.4314 7.5963 -0.1540 38 1 3.7896 4.6447 0.0005 39 1 4.6220 0.4096 -1.9998 40 1 2.4997 -0.8583 -1.8069 41 1 3.7243 -1.7940 -2.6970 42 1 3.3665 -2.1859 -0.9978 43 1 6.0117 -1.5285 -3.1271 44 1 8.6710 -4.1287 -3.0177 45 1 7.0511 -3.7243 -3.7327 46 1 10.6408 -2.8849 -4.1540 47 1 9.6204 -3.4339 -5.5050 48 1 11.5940 -2.7516 -7.2717 49 1 12.3387 -1.1360 -7.3190 50 1 12.6140 -2.2023 -5.9203 51 1 8.7536 -0.4506 -2.7074 52 1 9.8706 -1.8228 -2.2946 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:56:13 Heat of formation + Delta-G solvation = -154.788271 kcal Electronic energy + Delta-G solvation = -38765.506868 eV Core-core repulsion = 33466.387003 eV Total energy + Delta-G solvation = -5299.119865 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.114 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -42.03946 -41.38580 -39.96853 -39.23966 -38.81695 -37.97734 -37.79432 -37.00927 -36.89943 -34.97725 -33.12050 -31.57389 -31.37524 -30.81809 -30.06109 -28.54754 -26.76514 -26.72617 -25.76831 -24.04529 -23.61179 -22.83703 -21.88357 -20.44031 -19.81281 -19.70113 -18.79732 -18.57528 -18.32676 -17.68619 -17.54096 -17.38724 -17.05147 -16.92735 -16.85138 -16.39510 -16.28829 -16.14120 -15.91791 -15.79595 -15.70339 -15.37718 -15.17794 -14.80391 -14.63633 -14.31103 -14.12620 -14.01393 -13.99182 -13.91882 -13.73014 -13.47868 -13.40906 -13.23629 -13.14112 -13.01948 -12.95471 -12.90159 -12.71846 -12.59941 -12.46817 -12.38641 -12.19933 -12.17923 -11.91186 -11.87421 -11.86198 -11.40121 -11.33926 -11.02263 -10.78904 -10.53813 -10.17552 -9.89499 -9.43279 -5.01894 -0.90898 -0.36952 -0.04446 0.83589 1.23622 1.41537 1.57800 1.61200 1.90624 1.92105 2.14969 2.19260 2.65684 2.74954 3.10970 3.32108 3.37166 3.44143 3.51185 3.55020 3.63762 3.70132 3.74081 3.78506 3.82921 3.94691 4.00099 4.03073 4.07907 4.09457 4.20168 4.29633 4.35429 4.39363 4.42836 4.51073 4.56252 4.67072 4.68541 4.73531 4.74374 4.80665 4.81798 4.83029 4.96123 4.98341 5.01211 5.06261 5.12462 5.14379 5.21226 5.51701 5.89360 6.28483 6.42784 6.70137 7.08813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.128 3.872 4 C -0.163 4.163 5 C -0.064 4.064 6 C -0.062 4.062 7 O -0.548 6.548 8 Si 0.752 3.248 9 C -0.134 4.134 10 C -0.024 4.024 11 Cl -0.051 7.051 12 C 0.052 3.948 13 O -0.306 6.306 14 C 0.072 3.928 15 C -0.160 4.160 16 C 0.519 3.481 17 O -0.557 6.557 18 N -0.700 5.700 19 C 0.108 3.892 20 H 0.091 0.909 21 C -0.109 4.109 22 C -0.111 4.111 23 H 0.101 0.899 24 C -0.583 4.583 25 S 2.405 3.595 26 C -0.645 4.645 27 O -0.992 6.992 28 O -0.989 6.989 29 C -0.161 4.161 30 H 0.072 0.928 31 H 0.119 0.881 32 H 0.066 0.934 33 H 0.162 0.838 34 H 0.124 0.876 35 H 0.397 0.603 36 H -0.283 1.283 37 H -0.290 1.290 38 H 0.157 0.843 39 H 0.098 0.902 40 H 0.080 0.920 41 H 0.099 0.901 42 H 0.061 0.939 43 H 0.416 0.584 44 H 0.122 0.878 45 H 0.095 0.905 46 H 0.164 0.836 47 H 0.172 0.828 48 H 0.154 0.846 49 H 0.126 0.874 50 H 0.152 0.848 51 H 0.056 0.944 52 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.284 -5.703 -4.356 7.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.081 3.919 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.173 4.173 7 O -0.356 6.356 8 Si 0.658 3.342 9 C -0.152 4.152 10 C -0.051 4.051 11 Cl -0.021 7.021 12 C 0.006 3.994 13 O -0.222 6.222 14 C 0.013 3.987 15 C -0.217 4.217 16 C 0.305 3.695 17 O -0.434 6.434 18 N -0.353 5.353 19 C 0.003 3.997 20 H 0.109 0.891 21 C -0.148 4.148 22 C -0.131 4.131 23 H 0.119 0.881 24 C -0.714 4.714 25 S 2.594 3.406 26 C -0.797 4.797 27 O -0.989 6.989 28 O -0.987 6.987 29 C -0.199 4.199 30 H 0.090 0.910 31 H 0.137 0.863 32 H 0.085 0.915 33 H 0.179 0.821 34 H 0.142 0.858 35 H 0.248 0.752 36 H -0.210 1.210 37 H -0.218 1.218 38 H 0.174 0.826 39 H 0.116 0.884 40 H 0.099 0.901 41 H 0.117 0.883 42 H 0.080 0.920 43 H 0.253 0.747 44 H 0.140 0.860 45 H 0.113 0.887 46 H 0.182 0.818 47 H 0.190 0.810 48 H 0.172 0.828 49 H 0.145 0.855 50 H 0.171 0.829 51 H 0.075 0.925 52 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.234 -4.508 -4.388 6.411 hybrid contribution -0.057 -0.538 -0.641 0.839 sum -1.291 -5.047 -5.029 7.240 Atomic orbital electron populations 1.23462 0.75998 1.05950 1.02685 1.86213 1.23478 1.25090 1.87693 1.19207 0.90387 0.86195 0.96118 1.21320 1.01697 0.90073 1.05127 1.20216 0.92568 0.96176 0.97479 1.25057 1.00843 1.00396 0.91009 1.86490 1.36996 1.96439 1.15646 0.93741 0.79654 0.74294 0.86487 1.20892 0.93029 0.97109 1.04202 1.21111 0.85921 0.93753 1.04339 1.98420 1.08654 1.98465 1.96599 1.17799 0.87404 0.85380 1.08777 1.86253 1.69923 1.38112 1.27910 1.22338 0.93006 0.97485 0.85903 1.22236 0.98039 0.98913 1.02537 1.20546 0.85994 0.78639 0.84294 1.90730 1.65549 1.58275 1.28841 1.45495 1.22574 1.57259 1.10005 1.21942 0.82579 0.94261 1.00909 0.89108 1.23310 1.02511 0.95735 0.93268 1.22403 0.95952 0.99671 0.95052 0.88096 1.30166 1.07854 1.18810 1.14586 1.07857 0.77824 0.78633 0.76262 1.30149 1.19495 1.14820 1.15245 1.93546 1.59944 1.84693 1.60705 1.93560 1.83106 1.55045 1.66946 1.23726 0.99972 1.00057 0.96175 0.90978 0.86279 0.91532 0.82093 0.85849 0.75244 1.21004 1.21753 0.82589 0.88398 0.90082 0.88284 0.91979 0.74717 0.85960 0.88680 0.81795 0.81020 0.82770 0.85496 0.82942 0.92489 0.87198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.69 8.19 -79.52 -0.65 -1.34 16 3 C 0.13 0.44 6.54 22.56 0.15 0.59 16 4 C -0.16 0.08 8.67 22.35 0.19 0.27 16 5 C -0.06 0.06 5.35 -19.86 -0.11 -0.04 16 6 C -0.06 0.19 2.80 71.24 0.20 0.39 16 7 O -0.55 1.43 12.83 -148.98 -1.91 -0.48 16 8 Si 0.75 -1.94 29.80 68.60 2.04 0.11 16 9 C -0.13 -0.13 8.45 22.30 0.19 0.05 16 10 C -0.02 -0.14 6.33 22.39 0.14 0.00 16 11 Cl -0.05 -0.43 28.50 -2.72 -0.08 -0.50 16 12 C 0.05 0.38 5.56 22.58 0.13 0.50 16 13 O -0.31 -3.31 8.48 -67.33 -0.57 -3.89 16 14 C 0.07 0.34 3.19 29.85 0.10 0.44 16 15 C -0.16 0.08 9.05 71.98 0.65 0.73 16 16 C 0.52 4.08 7.18 87.66 0.63 4.71 16 17 O -0.56 -9.79 16.11 15.95 0.26 -9.53 16 18 N -0.70 -0.23 5.22 -440.04 -2.30 -2.52 16 19 C 0.11 -0.05 4.32 45.52 0.20 0.14 16 20 H 0.09 0.34 7.47 -2.39 -0.02 0.32 16 21 C -0.11 0.88 7.39 31.12 0.23 1.11 16 22 C -0.11 0.64 3.53 -10.27 -0.04 0.60 16 23 H 0.10 -0.51 8.13 -2.38 -0.02 -0.53 16 24 C -0.58 6.42 5.64 71.98 0.41 6.82 16 25 S 2.40 -7.55 5.35 -56.49 -0.30 -7.85 16 26 C -0.65 6.88 10.62 113.37 1.20 8.08 16 27 O -0.99 -5.80 18.10 -127.37 -2.31 -8.11 16 28 O -0.99 -6.75 18.10 -127.37 -2.30 -9.05 16 29 C -0.16 0.07 7.43 31.12 0.23 0.30 16 30 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 31 H 0.12 -0.98 8.14 -2.39 -0.02 -1.00 16 32 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 33 H 0.16 -0.67 6.30 -2.91 -0.02 -0.69 16 34 H 0.12 -0.46 7.96 -2.39 -0.02 -0.48 16 35 H 0.40 -3.86 8.70 -74.05 -0.64 -4.50 16 36 H -0.28 -0.75 7.11 99.48 0.71 -0.04 16 37 H -0.29 -1.26 7.11 99.48 0.71 -0.55 16 38 H 0.16 -0.39 4.89 -2.91 -0.01 -0.41 16 39 H 0.10 0.17 7.91 -2.39 -0.02 0.16 16 40 H 0.08 -0.05 6.28 -2.39 -0.01 -0.06 16 41 H 0.10 -0.65 7.93 -2.39 -0.02 -0.67 16 42 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.42 -2.46 8.49 -92.71 -0.79 -3.24 16 44 H 0.12 -1.41 8.10 -2.39 -0.02 -1.43 16 45 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 46 H 0.16 -2.64 7.85 -2.39 -0.02 -2.66 16 47 H 0.17 -3.01 8.14 -2.39 -0.02 -3.03 16 48 H 0.15 -2.39 8.14 -2.39 -0.02 -2.41 16 49 H 0.13 -1.15 8.14 -2.39 -0.02 -1.17 16 50 H 0.15 -2.28 8.14 -2.39 -0.02 -2.30 16 51 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 52 H 0.11 -0.31 7.90 -2.39 -0.02 -0.33 16 Total: 0.00 -41.16 455.11 -2.92 -44.08 By element: Atomic # 1 Polarization: -26.24 SS G_CDS: -0.41 Total: -26.65 kcal Atomic # 6 Polarization: 20.12 SS G_CDS: 5.61 Total: 25.74 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -2.30 Total: -2.52 kcal Atomic # 8 Polarization: -24.91 SS G_CDS: -7.49 Total: -32.40 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: 2.04 Total: 0.11 kcal Atomic # 16 Polarization: -7.55 SS G_CDS: -0.30 Total: -7.85 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -0.08 Total: -0.50 kcal Total: -41.16 -2.92 -44.08 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.706 kcal (2) G-P(sol) polarization free energy of solvation -41.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.871 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds