Wall clock time and date at job start Sun Mar 7 2021 05:56:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81398 * 1 3 3 O 1.42100 * 108.57851 * 2 1 4 4 O 1.42105 * 108.57522 * 228.97881 * 2 1 3 5 5 C 1.81394 * 101.92223 * 114.48941 * 2 1 3 6 6 C 1.53003 * 109.47075 * 180.02562 * 5 2 1 7 7 H 1.08996 * 112.85140 * 43.79984 * 6 5 2 8 8 C 1.53781 * 113.61480 * 175.00018 * 6 5 2 9 9 C 1.53786 * 87.17350 * 139.93948 * 8 6 5 10 10 H 1.09000 * 113.61138 * 220.06261 * 9 8 6 11 11 N 1.46496 * 113.61518 * 89.15486 * 9 8 6 12 12 C 1.34779 * 119.99390 * 154.99856 * 11 9 8 13 13 O 1.21277 * 120.00682 * 0.02562 * 12 11 9 14 14 C 1.50703 * 119.99369 * 180.02562 * 12 11 9 15 15 C 1.53040 * 109.32737 * 180.35135 * 14 12 11 16 16 C 1.53490 * 108.58712 * 189.99736 * 15 14 12 17 17 N 1.47028 * 107.50846 * 61.20682 * 16 15 14 18 18 C 1.38925 * 118.88613 * 316.25963 * 17 16 15 19 19 C 1.31115 * 121.84494 * 13.28553 * 18 17 16 20 20 C 1.50707 * 118.54476 * 179.61612 * 19 18 17 21 21 O 1.42896 * 109.46965 * 250.02263 * 20 19 18 22 22 Si 1.86297 * 109.47035 * 10.02672 * 20 19 18 23 23 C 1.53782 * 113.61259 * 272.49852 * 6 5 2 24 24 H 1.09003 * 109.47334 * 305.50948 * 1 2 3 25 25 H 1.09003 * 109.47443 * 65.51015 * 1 2 3 26 26 H 1.09004 * 109.47039 * 185.50958 * 1 2 3 27 27 H 1.08994 * 109.47190 * 60.00169 * 5 2 1 28 28 H 1.09002 * 109.47468 * 299.99601 * 5 2 1 29 29 H 1.09002 * 113.61445 * 254.52948 * 8 6 5 30 30 H 1.09002 * 113.61408 * 25.34678 * 8 6 5 31 31 H 0.97001 * 120.00117 * 335.00621 * 11 9 8 32 32 H 1.09004 * 109.32751 * 299.99966 * 14 12 11 33 33 H 1.09005 * 109.62079 * 309.88502 * 15 14 12 34 34 H 1.08994 * 109.62502 * 70.44662 * 15 14 12 35 35 H 1.09007 * 109.96475 * 301.68269 * 16 15 14 36 36 H 1.09001 * 109.88267 * 180.69623 * 16 15 14 37 37 H 0.97001 * 120.55850 * 136.27514 * 17 16 15 38 38 H 1.07995 * 119.07789 * 193.30969 * 18 17 16 39 39 H 1.08998 * 109.46739 * 130.02518 * 20 19 18 40 40 H 0.96708 * 113.99595 * 179.97438 * 21 20 19 41 41 H 1.48500 * 109.99770 * 178.67939 * 22 20 19 42 42 H 1.48507 * 109.99817 * 299.99788 * 22 20 19 43 43 H 1.08997 * 113.61668 * 334.56352 * 23 6 5 44 44 H 1.08994 * 113.61387 * 105.47087 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 -1.0163 5 6 2.1887 -0.7357 1.6151 6 6 3.7055 -0.8184 1.7983 7 1 4.2200 0.0893 1.4833 8 6 4.1317 -1.3170 3.1892 9 6 5.2293 -2.1267 2.4788 10 1 5.3770 -3.1225 2.8969 11 7 6.4831 -1.3893 2.3050 12 6 7.6468 -2.0582 2.1827 13 8 7.6559 -3.2705 2.2159 14 6 8.9367 -1.2996 2.0045 15 6 10.0954 -2.2920 1.8830 16 6 11.4161 -1.5134 1.9551 17 7 11.4654 -0.8464 3.2644 18 6 10.3247 -0.2093 3.7365 19 6 9.1497 -0.3965 3.1856 20 6 7.9600 0.3260 3.7635 21 8 7.1008 -0.6139 4.4117 22 14 8.5427 1.5910 5.0009 23 6 4.3248 -2.1075 1.2330 24 1 -0.3634 0.5969 0.8365 25 1 -0.3634 0.4260 -0.9352 26 1 -0.3633 -1.0230 0.0987 27 1 1.7611 -1.7369 1.6663 28 1 1.7611 -0.1171 2.4042 29 1 4.5193 -0.5294 3.8355 30 1 3.3809 -1.9361 3.6801 31 1 6.4758 -0.4197 2.2781 32 1 8.8795 -0.6989 1.0967 33 1 10.0475 -3.0124 2.6997 34 1 10.0325 -2.8130 0.9277 35 1 11.4532 -0.7690 1.1596 36 1 12.2571 -2.2000 1.8581 37 1 12.2808 -0.8509 3.7898 38 1 10.4081 0.4592 4.5805 39 1 7.4142 0.8253 2.9630 40 1 6.3125 -0.2178 4.8081 41 1 7.3812 2.3322 5.5546 42 1 9.2885 0.9227 6.0975 43 1 3.6274 -2.9440 1.1885 44 1 4.8683 -1.9581 0.3001 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_15608500.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:56:43 Heat of formation + Delta-G solvation = -63.984537 kcal Electronic energy + Delta-G solvation = -27965.352627 eV Core-core repulsion = 24013.898472 eV Total energy + Delta-G solvation = -3951.454155 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.133 amu Computer time = 2.80 seconds Orbital eigenvalues (eV) -41.62815 -40.23033 -38.66369 -37.96806 -37.76652 -37.00190 -34.40874 -33.41665 -32.80679 -31.14778 -30.34744 -27.32433 -26.81141 -26.02458 -23.97487 -23.15689 -21.84401 -20.35440 -19.91330 -19.26217 -18.71063 -18.40633 -17.97249 -17.66530 -17.25397 -17.07221 -16.93853 -16.39797 -15.88577 -15.65063 -15.50916 -15.07080 -14.83603 -14.71871 -14.47366 -14.38058 -14.28276 -14.20080 -13.75775 -13.75112 -13.49421 -13.21472 -13.08406 -13.04737 -12.97263 -12.92871 -12.47580 -12.26915 -12.19517 -11.95850 -11.77692 -11.65977 -11.39158 -11.31924 -11.10000 -10.50996 -10.36779 -9.65632 -8.49033 -4.97454 -1.08139 1.20487 1.31372 1.55658 1.68772 1.91169 2.06344 2.36231 2.54518 2.57601 2.90964 3.28687 3.30089 3.42096 3.53628 3.69260 3.72775 3.73453 3.79811 3.86854 3.96059 4.02231 4.12118 4.17941 4.27502 4.31348 4.38477 4.42603 4.57791 4.59963 4.62011 4.65329 4.74343 4.82157 4.89624 4.93123 5.03766 5.15042 5.21353 5.36908 5.43295 5.79026 6.26593 6.48381 6.77228 6.78493 7.56763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.940 6.940 4 O -0.933 6.933 5 C -0.601 4.601 6 C -0.107 4.107 7 H 0.103 0.897 8 C -0.128 4.128 9 C 0.129 3.871 10 H 0.105 0.895 11 N -0.695 5.695 12 C 0.542 3.458 13 O -0.545 6.545 14 C -0.042 4.042 15 C -0.120 4.120 16 C 0.119 3.881 17 N -0.747 5.747 18 C 0.158 3.842 19 C -0.238 4.238 20 C -0.057 4.057 21 O -0.526 6.526 22 Si 0.668 3.332 23 C -0.154 4.154 24 H 0.128 0.872 25 H 0.130 0.870 26 H 0.128 0.872 27 H 0.135 0.865 28 H 0.135 0.865 29 H 0.075 0.925 30 H 0.098 0.902 31 H 0.397 0.603 32 H 0.096 0.904 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.065 0.935 36 H 0.083 0.917 37 H 0.404 0.596 38 H 0.134 0.866 39 H 0.063 0.937 40 H 0.366 0.634 41 H -0.264 1.264 42 H -0.259 1.259 43 H 0.097 0.903 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.641 3.905 1.766 4.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.600 3.400 3 O -0.937 6.937 4 O -0.930 6.930 5 C -0.730 4.730 6 C -0.126 4.126 7 H 0.121 0.879 8 C -0.167 4.167 9 C 0.022 3.978 10 H 0.123 0.877 11 N -0.348 5.348 12 C 0.329 3.671 13 O -0.422 6.422 14 C -0.063 4.063 15 C -0.158 4.158 16 C -0.006 4.006 17 N -0.377 5.377 18 C 0.036 3.964 19 C -0.248 4.248 20 C -0.168 4.168 21 O -0.332 6.332 22 Si 0.570 3.430 23 C -0.193 4.193 24 H 0.146 0.854 25 H 0.149 0.851 26 H 0.147 0.853 27 H 0.153 0.847 28 H 0.153 0.847 29 H 0.094 0.906 30 H 0.117 0.883 31 H 0.235 0.765 32 H 0.114 0.886 33 H 0.099 0.901 34 H 0.099 0.901 35 H 0.083 0.917 36 H 0.101 0.899 37 H 0.238 0.762 38 H 0.150 0.850 39 H 0.081 0.919 40 H 0.214 0.786 41 H -0.189 1.189 42 H -0.184 1.184 43 H 0.115 0.885 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.345 3.146 1.608 3.550 hybrid contribution -1.727 -0.155 1.190 2.103 sum -1.382 2.991 2.798 4.323 Atomic orbital electron populations 1.30305 1.26972 1.11608 1.11944 1.07952 0.78270 0.75916 0.77886 1.93612 1.79052 1.34501 1.86545 1.93625 1.78790 1.66833 1.53792 1.30312 1.05195 1.14215 1.23259 1.22360 0.90465 0.99962 0.99809 0.87928 1.23329 0.98178 1.00086 0.95137 1.21675 0.83063 0.97311 0.95726 0.87741 1.45704 1.05515 1.09800 1.73757 1.20243 0.84740 0.87738 0.74401 1.90680 1.86968 1.14188 1.50393 1.19736 0.93050 0.95813 0.97673 1.21708 0.92824 0.97258 1.04060 1.21675 0.98081 0.95810 0.84990 1.44584 1.12350 1.59353 1.21372 1.20419 0.86730 0.93311 0.95968 1.19503 0.92365 1.08811 1.04151 1.24528 0.93084 0.97814 1.01373 1.86861 1.36826 1.35061 1.74473 0.95279 0.84776 0.81508 0.81422 1.23702 0.99330 0.96760 0.99459 0.85376 0.85150 0.85307 0.84666 0.84696 0.90646 0.88335 0.76547 0.88625 0.90149 0.90110 0.91725 0.89872 0.76169 0.84956 0.91942 0.78588 1.18918 1.18413 0.88467 0.90010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 47. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 2.84 10.62 101.05 1.07 3.91 16 2 S 2.42 -3.92 5.35 -107.50 -0.58 -4.50 16 3 O -0.94 -2.18 18.10 -57.83 -1.05 -3.23 16 4 O -0.93 -2.36 18.10 -57.83 -1.05 -3.41 16 5 C -0.60 2.48 5.64 37.16 0.21 2.69 16 6 C -0.11 0.22 3.54 -89.80 -0.32 -0.10 16 7 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 8 C -0.13 0.33 7.38 -25.92 -0.19 0.14 16 9 C 0.13 0.04 4.28 -67.02 -0.29 -0.25 16 10 H 0.10 0.27 7.47 -51.93 -0.39 -0.12 16 11 N -0.70 -0.45 2.92 -52.92 -0.15 -0.60 16 12 C 0.54 1.88 6.37 -10.98 -0.07 1.81 16 13 O -0.55 -4.13 15.40 5.56 0.09 -4.04 16 14 C -0.04 -0.04 2.75 -93.14 -0.26 -0.30 16 15 C -0.12 -0.13 4.89 -26.46 -0.13 -0.26 16 16 C 0.12 -0.18 7.16 -3.50 -0.03 -0.20 16 17 N -0.75 1.01 5.83 -60.71 -0.35 0.65 16 18 C 0.16 -0.08 9.62 -16.08 -0.15 -0.23 16 19 C -0.24 -0.04 5.18 -101.34 -0.52 -0.56 16 20 C -0.06 0.07 1.73 36.01 0.06 0.13 16 21 O -0.53 -0.02 9.40 -35.23 -0.33 -0.35 16 22 Si 0.67 -1.09 29.91 -169.99 -5.08 -6.17 16 23 C -0.15 0.02 7.44 -25.82 -0.19 -0.17 16 24 H 0.13 -0.77 8.14 -51.92 -0.42 -1.19 16 25 H 0.13 -0.52 8.14 -51.92 -0.42 -0.95 16 26 H 0.13 -0.76 8.14 -51.92 -0.42 -1.18 16 27 H 0.14 -0.81 7.84 -51.93 -0.41 -1.22 16 28 H 0.13 -0.86 8.14 -51.92 -0.42 -1.29 16 29 H 0.07 -0.28 6.85 -51.93 -0.36 -0.64 16 30 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 31 H 0.40 -0.56 5.61 -40.82 -0.23 -0.79 16 32 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 0.30 7.76 -51.93 -0.40 -0.10 16 34 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.40 -1.26 8.96 -40.82 -0.37 -1.63 16 38 H 0.13 -0.23 4.34 -52.49 -0.23 -0.46 16 39 H 0.06 -0.21 6.39 -51.93 -0.33 -0.54 16 40 H 0.37 -1.12 7.49 45.56 0.34 -0.77 16 41 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 42 H -0.26 -0.41 6.89 56.52 0.39 -0.03 16 43 H 0.10 -0.10 7.90 -51.93 -0.41 -0.51 16 44 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 355.71 15.07 5.36 5.36 Total: 0.00 -14.03 355.71 -10.58 -24.61 By element: Atomic # 1 Polarization: -8.31 SS G_CDS: -6.63 Total: -14.94 kcal Atomic # 6 Polarization: 7.43 SS G_CDS: -0.80 Total: 6.62 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.51 Total: 0.05 kcal Atomic # 8 Polarization: -8.69 SS G_CDS: -2.34 Total: -11.03 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.08 Total: -6.17 kcal Atomic # 16 Polarization: -3.92 SS G_CDS: -0.58 Total: -4.50 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -14.03 -10.58 -24.61 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_15608500.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.376 kcal (2) G-P(sol) polarization free energy of solvation -14.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.81 seconds