Wall clock time and date at job start Sun Mar 7 2021 05:56:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 O 1.42093 * 108.58077 * 2 1 4 4 O 1.42101 * 108.57559 * 228.96933 * 2 1 3 5 5 C 1.81408 * 101.92164 * 114.48414 * 2 1 3 6 6 C 1.52990 * 109.47101 * 179.97438 * 5 2 1 7 7 H 1.09000 * 112.90908 * 43.75343 * 6 5 2 8 8 C 1.53786 * 113.61464 * 174.99971 * 6 5 2 9 9 C 1.53781 * 87.17350 * 140.02626 * 8 6 5 10 10 H 1.08998 * 113.61196 * 219.97759 * 9 8 6 11 11 N 1.46506 * 113.61613 * 89.15811 * 9 8 6 12 12 C 1.34774 * 119.99981 * 154.99882 * 11 9 8 13 13 O 1.21622 * 120.00171 * 0.02562 * 12 11 9 14 14 C 1.47258 * 119.99905 * 180.02562 * 12 11 9 15 15 C 1.36338 * 126.97370 * 179.71016 * 14 12 11 16 16 C 1.50997 * 126.78131 * 0.72168 * 15 14 12 17 17 C 1.53408 * 108.30772 * 163.85055 * 16 15 14 18 18 C 1.53159 * 109.03856 * 48.25179 * 17 16 15 19 19 C 1.53133 * 109.52915 * 290.42791 * 18 17 16 20 20 N 1.35207 * 108.66500 * 179.85879 * 15 14 12 21 21 C 1.36431 * 109.89725 * 0.42024 * 20 15 14 22 22 C 1.50706 * 125.48883 * 179.71239 * 21 20 15 23 23 O 1.42897 * 109.47429 * 330.01194 * 22 21 20 24 24 Si 1.86301 * 109.46631 * 210.01198 * 22 21 20 25 25 C 1.34492 * 109.01321 * 359.74413 * 21 20 15 26 26 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 27 27 H 1.09008 * 109.47049 * 305.51597 * 1 2 3 28 28 H 1.08997 * 109.46995 * 65.51394 * 1 2 3 29 29 H 1.08998 * 109.47474 * 185.51868 * 1 2 3 30 30 H 1.09007 * 109.46646 * 59.99981 * 5 2 1 31 31 H 1.08994 * 109.47025 * 300.00248 * 5 2 1 32 32 H 1.09002 * 113.61357 * 25.43543 * 8 6 5 33 33 H 1.09002 * 113.61608 * 254.61705 * 8 6 5 34 34 H 0.97003 * 119.99276 * 335.00814 * 11 9 8 35 35 H 1.09002 * 109.87027 * 44.03310 * 16 15 14 36 36 H 1.08999 * 109.52771 * 283.46535 * 16 15 14 37 37 H 1.09003 * 109.54172 * 288.38374 * 17 16 15 38 38 H 1.08995 * 109.61000 * 168.16298 * 17 16 15 39 39 H 1.08998 * 109.45934 * 170.40854 * 18 17 16 40 40 H 1.09004 * 109.46203 * 50.44895 * 18 17 16 41 41 H 1.08990 * 109.56250 * 291.14361 * 19 18 17 42 42 H 1.08997 * 109.65241 * 170.86171 * 19 18 17 43 43 H 1.08998 * 109.46508 * 90.01534 * 22 21 20 44 44 H 0.96696 * 114.00005 * 300.00194 * 23 22 21 45 45 H 1.48495 * 110.00043 * 58.68018 * 24 22 21 46 46 H 1.48495 * 109.99769 * 180.02562 * 24 22 21 47 47 H 1.07999 * 126.81779 * 179.97438 * 25 21 20 48 48 H 1.09005 * 113.61471 * 139.98321 * 26 9 8 49 49 H 1.08996 * 113.61178 * 270.79663 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2667 -0.8842 -1.0161 5 6 2.1887 -0.7356 1.6153 6 6 3.7054 -0.8195 1.7980 7 1 4.2216 0.0870 1.4820 8 6 4.1317 -1.3180 3.1889 9 6 5.2298 -2.1270 2.4786 10 1 5.3790 -3.1222 2.8975 11 7 6.4833 -1.3889 2.3051 12 6 7.6474 -2.0570 2.1828 13 8 7.6572 -3.2727 2.2160 14 6 8.9075 -1.3150 2.0091 15 6 10.1580 -1.8420 1.8779 16 6 10.5253 -3.3066 1.8667 17 6 11.9445 -3.4432 1.3004 18 6 12.8614 -2.4368 2.0019 19 6 12.4902 -1.0163 1.5667 20 7 11.0420 -0.8288 1.7367 21 6 10.3880 0.3677 1.7826 22 6 11.0355 1.7237 1.6670 23 8 12.3652 1.6625 2.1866 24 14 10.0462 2.9689 2.6373 25 6 9.0726 0.1420 1.9484 26 6 4.3264 -2.1116 1.2341 27 1 -0.3633 0.5970 0.8365 28 1 -0.3633 0.4259 -0.9352 29 1 -0.3634 -1.0229 0.0988 30 1 1.7610 -1.7369 1.6665 31 1 1.7610 -0.1170 2.4043 32 1 3.3811 -1.9377 3.6796 33 1 4.5187 -0.5304 3.8354 34 1 6.4754 -0.4192 2.2785 35 1 9.8249 -3.8595 1.2407 36 1 10.4964 -3.6972 2.8839 37 1 11.9309 -3.2395 0.2296 38 1 12.3121 -4.4544 1.4745 39 1 13.8977 -2.6402 1.7321 40 1 12.7427 -2.5286 3.0816 41 1 12.7562 -0.8742 0.5194 42 1 13.0264 -0.2929 2.1808 43 1 11.0681 2.0224 0.6192 44 1 12.4124 1.4022 3.1167 45 1 9.9671 2.5561 4.0616 46 1 10.6739 4.3104 2.5309 47 1 8.2927 0.8853 2.0226 48 1 4.8707 -1.9636 0.3013 49 1 3.6302 -2.9490 1.1897 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_16915396.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:56:47 Heat of formation + Delta-G solvation = -72.088661 kcal Electronic energy + Delta-G solvation = -32043.125269 eV Core-core repulsion = 27679.329794 eV Total energy + Delta-G solvation = -4363.795476 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.81231 -41.03419 -39.20564 -38.09385 -37.89437 -36.92623 -36.91830 -34.55273 -33.48837 -31.23334 -31.02308 -30.14955 -29.28239 -26.65146 -26.61770 -24.73692 -24.69215 -23.39109 -21.78146 -21.28932 -20.30367 -19.73713 -19.52372 -18.94569 -17.69847 -17.48755 -17.09710 -16.93524 -16.84784 -16.66861 -16.52201 -16.17018 -15.86574 -15.56815 -15.37603 -15.20629 -15.10648 -15.04529 -14.66260 -14.46777 -14.35251 -14.01907 -13.93536 -13.86189 -13.84404 -13.38924 -13.22074 -13.05471 -12.93507 -12.83443 -12.80865 -12.42124 -12.29019 -12.18369 -12.10109 -12.01431 -11.84242 -11.78878 -11.77281 -11.23827 -10.95007 -10.89521 -10.85842 -10.05403 -9.56930 -9.06526 -4.90060 -0.83191 0.69998 1.04340 1.42420 1.67111 1.76841 1.98480 2.02047 2.38784 2.52388 2.83034 3.17333 3.18929 3.45270 3.47021 3.53249 3.55254 3.66850 3.73101 3.76478 3.79831 3.88319 4.13860 4.14530 4.17299 4.27187 4.29489 4.34443 4.37824 4.47421 4.50671 4.60214 4.61751 4.73089 4.75791 4.79806 4.82860 4.88524 4.90638 4.96433 4.98766 5.02731 5.07736 5.10347 5.14951 5.17969 5.26656 5.67876 5.72453 6.00779 6.20014 6.33174 6.67260 7.35929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.647 4.647 2 S 2.411 3.589 3 O -0.989 6.989 4 O -0.989 6.989 5 C -0.583 4.583 6 C -0.110 4.110 7 H 0.103 0.897 8 C -0.113 4.113 9 C 0.110 3.890 10 H 0.088 0.912 11 N -0.701 5.701 12 C 0.591 3.409 13 O -0.588 6.588 14 C -0.258 4.258 15 C 0.103 3.897 16 C -0.053 4.053 17 C -0.125 4.125 18 C -0.133 4.133 19 C 0.095 3.905 20 N -0.428 5.428 21 C -0.018 4.018 22 C -0.055 4.055 23 O -0.543 6.543 24 Si 0.797 3.203 25 C -0.162 4.162 26 C -0.159 4.159 27 H 0.153 0.847 28 H 0.126 0.874 29 H 0.150 0.850 30 H 0.162 0.838 31 H 0.170 0.830 32 H 0.119 0.881 33 H 0.092 0.908 34 H 0.413 0.587 35 H 0.080 0.920 36 H 0.081 0.919 37 H 0.065 0.935 38 H 0.090 0.910 39 H 0.107 0.893 40 H 0.072 0.928 41 H 0.083 0.917 42 H 0.113 0.887 43 H 0.129 0.871 44 H 0.386 0.614 45 H -0.287 1.287 46 H -0.295 1.295 47 H 0.182 0.818 48 H 0.056 0.944 49 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.639 1.846 4.261 5.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.798 4.798 2 S 2.600 3.400 3 O -0.986 6.986 4 O -0.986 6.986 5 C -0.714 4.714 6 C -0.129 4.129 7 H 0.121 0.879 8 C -0.151 4.151 9 C 0.004 3.996 10 H 0.106 0.894 11 N -0.352 5.352 12 C 0.381 3.619 13 O -0.470 6.470 14 C -0.268 4.268 15 C -0.016 4.016 16 C -0.091 4.091 17 C -0.162 4.162 18 C -0.171 4.171 19 C -0.025 4.025 20 N -0.104 5.104 21 C -0.126 4.126 22 C -0.164 4.164 23 O -0.351 6.351 24 Si 0.700 3.300 25 C -0.186 4.186 26 C -0.198 4.198 27 H 0.171 0.829 28 H 0.144 0.856 29 H 0.169 0.831 30 H 0.180 0.820 31 H 0.188 0.812 32 H 0.138 0.862 33 H 0.110 0.890 34 H 0.250 0.750 35 H 0.098 0.902 36 H 0.099 0.901 37 H 0.083 0.917 38 H 0.108 0.892 39 H 0.126 0.874 40 H 0.091 0.909 41 H 0.101 0.899 42 H 0.131 0.869 43 H 0.146 0.854 44 H 0.235 0.765 45 H -0.214 1.214 46 H -0.222 1.222 47 H 0.199 0.801 48 H 0.075 0.925 49 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -2.523 2.074 3.582 4.848 hybrid contribution 0.442 -0.511 0.721 0.988 sum -2.081 1.562 4.303 5.029 Atomic orbital electron populations 1.30162 1.23115 1.13626 1.12937 1.07727 0.79475 0.74434 0.78407 1.93546 1.80782 1.36749 1.87523 1.93558 1.80661 1.67521 1.56866 1.30164 1.03828 1.16096 1.21352 1.22429 0.92036 0.98847 0.99595 0.87876 1.23309 0.96781 1.00036 0.95023 1.21884 0.83121 0.97114 0.97503 0.89355 1.45359 1.05220 1.10675 1.73916 1.17558 0.83501 0.86165 0.74644 1.90730 1.87752 1.15121 1.53362 1.19982 0.91889 0.94201 1.20695 1.20578 0.88512 0.91365 1.01119 1.20430 0.97728 0.88271 1.02656 1.21702 0.93428 1.01029 1.00071 1.21923 1.01626 0.92157 1.01347 1.22444 0.76600 0.99662 1.03772 1.44045 1.07904 1.04435 1.54050 1.20967 0.92727 0.87735 1.11189 1.25040 0.87871 0.96350 1.07091 1.86564 1.25855 1.90949 1.31768 0.93429 0.86124 0.73081 0.77346 1.22011 0.95205 0.93571 1.07773 1.23751 0.99436 0.98644 0.97953 0.82877 0.85551 0.83117 0.82017 0.81184 0.86235 0.88980 0.74990 0.90180 0.90071 0.91670 0.89168 0.87441 0.90926 0.89851 0.86865 0.85371 0.76473 1.21360 1.22214 0.80057 0.92484 0.87424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 6.95 10.62 113.37 1.20 8.16 16 2 S 2.41 -8.47 5.35 -56.49 -0.30 -8.77 16 3 O -0.99 -5.15 18.10 -127.37 -2.30 -7.45 16 4 O -0.99 -6.37 18.10 -127.37 -2.31 -8.67 16 5 C -0.58 6.32 5.65 71.98 0.41 6.73 16 6 C -0.11 0.58 3.55 -10.18 -0.04 0.54 16 7 H 0.10 -0.49 8.13 -2.39 -0.02 -0.51 16 8 C -0.11 0.79 7.38 31.12 0.23 1.02 16 9 C 0.11 0.06 4.32 45.52 0.20 0.26 16 10 H 0.09 0.40 7.46 -2.39 -0.02 0.38 16 11 N -0.70 -1.61 5.26 -443.45 -2.33 -3.94 16 12 C 0.59 5.56 7.81 86.61 0.68 6.24 16 13 O -0.59 -9.64 14.93 -4.10 -0.06 -9.70 16 14 C -0.26 -1.83 6.28 -19.12 -0.12 -1.95 16 15 C 0.10 0.69 6.57 41.69 0.27 0.97 16 16 C -0.05 -0.29 5.32 30.08 0.16 -0.13 16 17 C -0.12 0.04 5.98 30.78 0.18 0.22 16 18 C -0.13 0.43 5.92 30.69 0.18 0.61 16 19 C 0.09 -0.15 6.22 86.33 0.54 0.39 16 20 N -0.43 -1.23 3.11 -493.62 -1.54 -2.77 16 21 C -0.02 -0.02 6.15 40.99 0.25 0.23 16 22 C -0.06 0.12 3.00 71.24 0.21 0.34 16 23 O -0.54 0.66 10.28 -148.98 -1.53 -0.87 16 24 Si 0.80 -2.98 31.11 68.60 2.13 -0.84 16 25 C -0.16 -0.17 9.09 23.64 0.21 0.04 16 26 C -0.16 -0.01 7.44 31.21 0.23 0.22 16 27 H 0.15 -2.37 8.14 -2.39 -0.02 -2.39 16 28 H 0.13 -1.16 8.14 -2.39 -0.02 -1.18 16 29 H 0.15 -2.24 8.14 -2.39 -0.02 -2.26 16 30 H 0.16 -2.54 7.85 -2.39 -0.02 -2.56 16 31 H 0.17 -2.93 8.14 -2.39 -0.02 -2.95 16 32 H 0.12 -1.25 8.10 -2.39 -0.02 -1.27 16 33 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 34 H 0.41 -1.36 7.83 -92.71 -0.73 -2.08 16 35 H 0.08 0.74 7.40 -2.39 -0.02 0.72 16 36 H 0.08 0.48 8.14 -2.39 -0.02 0.46 16 37 H 0.06 0.04 8.12 -2.39 -0.02 0.02 16 38 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.11 -0.73 8.14 -2.39 -0.02 -0.75 16 40 H 0.07 -0.18 8.11 -2.38 -0.02 -0.20 16 41 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 42 H 0.11 -0.42 5.67 -2.39 -0.01 -0.44 16 43 H 0.13 -0.45 7.96 -2.39 -0.02 -0.47 16 44 H 0.39 -2.24 8.27 -74.06 -0.61 -2.85 16 45 H -0.29 -0.44 7.11 99.48 0.71 0.27 16 46 H -0.29 -0.93 7.11 99.48 0.71 -0.23 16 47 H 0.18 -1.17 6.52 -2.91 -0.02 -1.19 16 48 H 0.06 0.30 8.14 -2.38 -0.02 0.28 16 49 H 0.11 -0.26 7.91 -2.39 -0.02 -0.28 16 Total: 0.00 -36.06 402.50 -3.76 -39.81 By element: Atomic # 1 Polarization: -20.35 SS G_CDS: -0.32 Total: -20.67 kcal Atomic # 6 Polarization: 19.07 SS G_CDS: 4.81 Total: 23.88 kcal Atomic # 7 Polarization: -2.84 SS G_CDS: -3.87 Total: -6.71 kcal Atomic # 8 Polarization: -20.49 SS G_CDS: -6.20 Total: -26.69 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.13 Total: -0.84 kcal Atomic # 16 Polarization: -8.47 SS G_CDS: -0.30 Total: -8.77 kcal Total: -36.06 -3.76 -39.81 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_16915396.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.275 kcal (2) G-P(sol) polarization free energy of solvation -36.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.089 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds