Wall clock time and date at job start Sun Mar 7 2021 05:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35999 * 116.99730 * 2 1 4 4 C 1.39156 * 120.07026 * 180.02562 * 3 2 1 5 5 O 1.35994 * 120.07474 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99942 * 180.02562 * 5 4 3 7 7 C 1.50703 * 109.46859 * 179.97438 * 6 5 4 8 8 O 1.21277 * 119.99948 * 0.02562 * 7 6 5 9 9 N 1.34779 * 119.99369 * 180.02562 * 7 6 5 10 10 C 1.46496 * 119.99390 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.91246 * 23.74616 * 10 9 7 12 12 C 1.53786 * 113.61518 * 154.99856 * 10 9 7 13 13 C 1.53781 * 87.17350 * 89.15486 * 12 10 9 14 14 H 1.08996 * 113.61580 * 270.76247 * 13 12 10 15 15 C 1.53003 * 113.61480 * 139.93948 * 13 12 10 16 16 S 1.81394 * 109.47075 * 175.00018 * 15 13 12 17 17 C 1.81398 * 101.92223 * 180.02562 * 16 15 13 18 18 O 1.42100 * 108.58004 * 294.48924 * 16 15 13 19 19 O 1.42105 * 108.58117 * 65.51594 * 16 15 13 20 20 C 1.53782 * 87.08260 * 25.39213 * 13 12 10 21 21 C 1.38568 * 119.85033 * 180.25767 * 4 3 2 22 22 C 1.38240 * 119.99714 * 359.46449 * 21 4 3 23 23 C 1.38256 * 120.14794 * 0.51374 * 22 21 4 24 24 C 1.50702 * 119.92352 * 179.74387 * 23 22 21 25 25 O 1.42902 * 109.46816 * 245.01912 * 24 23 22 26 26 Si 1.86297 * 109.47264 * 5.02143 * 24 23 22 27 27 C 1.38233 * 120.14575 * 359.76786 * 23 22 21 28 28 H 1.08994 * 109.47395 * 59.99556 * 1 2 3 29 29 H 1.09006 * 109.46818 * 180.02562 * 1 2 3 30 30 H 1.09006 * 109.46636 * 299.99174 * 1 2 3 31 31 H 1.09002 * 109.47129 * 60.00013 * 6 5 4 32 32 H 1.09002 * 109.46992 * 300.00118 * 6 5 4 33 33 H 0.97001 * 120.00492 * 359.97438 * 9 7 6 34 34 H 1.09002 * 113.61357 * 334.56403 * 12 10 9 35 35 H 1.09002 * 113.61608 * 203.74565 * 12 10 9 36 36 H 1.08994 * 109.47052 * 295.00030 * 15 13 12 37 37 H 1.09002 * 109.46569 * 54.99962 * 15 13 12 38 38 H 1.09003 * 109.47334 * 59.99888 * 17 16 15 39 39 H 1.09003 * 109.47443 * 179.97438 * 17 16 15 40 40 H 1.09004 * 109.47039 * 299.99899 * 17 16 15 41 41 H 1.08997 * 113.61668 * 89.11298 * 20 13 12 42 42 H 1.08994 * 113.61387 * 220.02033 * 20 13 12 43 43 H 1.07995 * 119.99745 * 179.72410 * 21 4 3 44 44 H 1.08002 * 119.92206 * 180.25634 * 22 21 4 45 45 H 1.09001 * 109.46980 * 125.02306 * 24 23 22 46 46 H 0.96703 * 114.00091 * 60.00700 * 25 24 23 47 47 H 1.48500 * 110.00049 * 180.02562 * 26 24 23 48 48 H 1.48497 * 110.00292 * 301.31663 * 26 24 23 49 49 H 1.08007 * 119.99955 * 179.97438 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4360 1.2864 -0.0005 5 8 4.1796 0.1478 -0.0005 6 6 5.6004 0.3008 -0.0005 7 6 6.2519 -1.0581 0.0001 8 8 5.5670 -2.0590 0.0000 9 7 7.5958 -1.1610 0.0007 10 6 8.2292 -2.4819 0.0008 11 1 7.5842 -3.2618 -0.4040 12 6 9.6473 -2.4852 -0.5941 13 6 10.1604 -2.1824 0.8236 14 1 10.2194 -1.1175 1.0485 15 6 11.4403 -2.9381 1.1866 16 16 12.0251 -2.3901 2.8140 17 6 13.5188 -3.3958 3.0335 18 8 12.4086 -1.0250 2.7212 19 8 11.0701 -2.7776 3.7923 20 6 8.8794 -2.8540 1.3458 21 6 4.0603 2.5235 0.0049 22 6 3.3028 3.6799 -0.0004 23 6 1.9223 3.6057 -0.0004 24 6 1.1015 4.8696 -0.0003 25 8 0.3650 4.9591 1.2210 26 14 2.2307 6.3434 -0.1540 27 6 1.2932 2.3748 0.0001 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5137 0.8901 31 1 5.9066 0.8506 0.8895 32 1 5.9065 0.8506 -0.8905 33 1 8.1436 -0.3604 0.0004 34 1 9.8247 -1.6776 -1.3044 35 1 9.9597 -3.4583 -0.9729 36 1 11.2346 -4.0080 1.2159 37 1 12.2064 -2.7357 0.4381 38 1 14.2237 -3.1796 2.2306 39 1 13.9782 -3.1593 3.9933 40 1 13.2524 -4.4524 3.0083 41 1 8.9805 -3.9286 1.4979 42 1 8.4368 -2.3442 2.2016 43 1 5.1385 2.5841 0.0090 44 1 3.7907 4.6434 -0.0004 45 1 0.4090 4.8531 -0.8419 46 1 0.9185 4.9784 2.0137 47 1 1.4334 7.5962 -0.1545 48 1 3.2005 6.3597 0.9704 49 1 0.2145 2.3196 0.0006 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:58:25 Heat of formation + Delta-G solvation = -138.676556 kcal Electronic energy + Delta-G solvation = -33017.681037 eV Core-core repulsion = 28234.597240 eV Total energy + Delta-G solvation = -4783.083798 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 4.51 seconds Orbital eigenvalues (eV) -41.82493 -41.33213 -39.94787 -39.00651 -38.78572 -38.02103 -37.05825 -36.97946 -34.82953 -32.12239 -31.56987 -31.31501 -30.55669 -29.28927 -28.39550 -26.94196 -26.22460 -24.50017 -23.51193 -22.57356 -21.89785 -20.55535 -19.96828 -19.76964 -18.57866 -18.41370 -17.99066 -17.80941 -17.55618 -17.35435 -17.18155 -16.99934 -16.89970 -16.59914 -16.13990 -15.99188 -15.83253 -15.77304 -15.62388 -15.22416 -15.12020 -14.69503 -14.43980 -14.33788 -14.28733 -14.22752 -13.76231 -13.70976 -13.55419 -13.46407 -13.18641 -13.10721 -13.01928 -12.65273 -12.60199 -12.54476 -12.33330 -12.16974 -12.11571 -12.04573 -11.98748 -11.62407 -11.54568 -11.23647 -10.89528 -10.61539 -10.20880 -9.77497 -8.84701 -4.97625 -1.13427 0.18723 0.31137 1.26738 1.40442 1.47813 1.57721 1.63337 1.94869 2.33207 2.49333 2.52724 2.57638 2.85169 3.15428 3.19933 3.35198 3.38530 3.44230 3.56100 3.63647 3.69153 3.72278 3.77087 3.79796 3.87662 3.92654 3.95369 4.07067 4.13452 4.22197 4.27078 4.30431 4.35125 4.49522 4.53600 4.53966 4.54910 4.57767 4.66264 4.67071 4.74952 4.89415 4.92681 5.01260 5.11590 5.38182 5.40085 5.56737 5.97100 6.29649 6.38966 6.55776 7.08844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.519 3.481 8 O -0.505 6.505 9 N -0.713 5.713 10 C 0.121 3.879 11 H 0.111 0.889 12 C -0.129 4.129 13 C -0.107 4.107 14 H 0.105 0.895 15 C -0.602 4.602 16 S 2.417 3.583 17 C -0.659 4.659 18 O -0.940 6.940 19 O -0.933 6.933 20 C -0.152 4.152 21 C -0.169 4.169 22 C -0.115 4.115 23 C -0.113 4.113 24 C -0.073 4.073 25 O -0.530 6.530 26 Si 0.688 3.312 27 C -0.146 4.146 28 H 0.056 0.944 29 H 0.103 0.897 30 H 0.056 0.944 31 H 0.095 0.905 32 H 0.096 0.904 33 H 0.403 0.597 34 H 0.081 0.919 35 H 0.103 0.897 36 H 0.136 0.864 37 H 0.136 0.864 38 H 0.128 0.872 39 H 0.130 0.870 40 H 0.129 0.871 41 H 0.101 0.899 42 H 0.084 0.916 43 H 0.139 0.861 44 H 0.133 0.867 45 H 0.118 0.882 46 H 0.376 0.624 47 H -0.258 1.258 48 H -0.260 1.260 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.138 0.174 -4.416 7.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.304 3.696 8 O -0.378 6.378 9 N -0.367 5.367 10 C 0.016 3.984 11 H 0.129 0.871 12 C -0.168 4.168 13 C -0.126 4.126 14 H 0.123 0.877 15 C -0.731 4.731 16 S 2.599 3.401 17 C -0.808 4.808 18 O -0.937 6.937 19 O -0.931 6.931 20 C -0.190 4.190 21 C -0.188 4.188 22 C -0.132 4.132 23 C -0.114 4.114 24 C -0.182 4.182 25 O -0.336 6.336 26 Si 0.589 3.411 27 C -0.165 4.165 28 H 0.075 0.925 29 H 0.121 0.879 30 H 0.075 0.925 31 H 0.113 0.887 32 H 0.114 0.886 33 H 0.238 0.762 34 H 0.100 0.900 35 H 0.121 0.879 36 H 0.154 0.846 37 H 0.155 0.845 38 H 0.147 0.853 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.120 0.880 42 H 0.102 0.898 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.136 0.864 46 H 0.224 0.776 47 H -0.183 1.183 48 H -0.185 1.185 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.044 0.390 -3.874 6.372 hybrid contribution 0.571 -0.340 0.643 0.924 sum 5.615 0.050 -3.232 6.479 Atomic orbital electron populations 1.23134 0.78119 1.04410 1.01362 1.86252 1.21335 1.25337 1.88541 1.18279 0.89006 0.85563 1.01030 1.18285 0.88304 0.85757 1.01761 1.86275 1.15992 1.27770 1.88855 1.22477 0.81343 0.96127 1.04126 1.20029 0.82300 0.90641 0.76635 1.90801 1.62517 1.38006 1.46473 1.45482 1.05926 1.08921 1.76400 1.21856 0.93880 0.85672 0.97030 0.87077 1.23344 0.94121 1.03910 0.95421 1.22376 0.91391 0.99814 0.99058 0.87697 1.30313 1.08140 1.11373 1.23235 1.07976 0.77550 0.76729 0.77880 1.30298 1.21852 1.16437 1.12199 1.93615 1.83270 1.30286 1.86543 1.93628 1.58870 1.84138 1.56424 1.23691 0.94680 1.02304 0.98366 1.20994 1.00473 0.90674 1.06682 1.20737 0.92893 0.98038 1.01570 1.19970 0.93687 0.95091 1.02626 1.25009 1.01677 1.01721 0.89841 1.86600 1.36186 1.95484 1.15379 0.94950 0.79598 0.76412 0.90115 1.20940 1.00365 0.90409 1.04760 0.92505 0.87868 0.92533 0.88694 0.88585 0.76196 0.90022 0.87877 0.84572 0.84524 0.85310 0.85105 0.85252 0.88046 0.89764 0.84294 0.84994 0.86432 0.77596 1.18271 1.18462 0.84204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 51. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.35 10.28 -34.24 -0.35 -1.70 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.10 9.45 -47.35 -0.45 -1.55 16 6 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 7 C 0.52 0.85 7.91 -10.98 -0.09 0.77 16 8 O -0.51 -3.45 16.10 -14.35 -0.23 -3.68 16 9 N -0.71 1.22 5.27 -52.92 -0.28 0.94 16 10 C 0.12 -0.17 4.33 -67.02 -0.29 -0.46 16 11 H 0.11 0.03 7.47 -51.93 -0.39 -0.36 16 12 C -0.13 0.50 7.38 -25.92 -0.19 0.31 16 13 C -0.11 0.35 3.54 -89.80 -0.32 0.03 16 14 H 0.10 -0.37 8.13 -51.93 -0.42 -0.79 16 15 C -0.60 3.01 5.64 37.16 0.21 3.22 16 16 S 2.42 -5.32 5.35 -107.50 -0.58 -5.89 16 17 C -0.66 3.18 10.62 101.05 1.07 4.25 16 18 O -0.94 -1.70 18.10 -57.83 -1.05 -2.74 16 19 O -0.93 -1.86 18.10 -57.83 -1.05 -2.91 16 20 C -0.15 0.22 7.44 -25.82 -0.19 0.03 16 21 C -0.17 0.02 9.04 -39.46 -0.36 -0.33 16 22 C -0.11 0.05 8.66 -39.57 -0.34 -0.29 16 23 C -0.11 -0.05 5.35 -104.62 -0.56 -0.61 16 24 C -0.07 0.02 2.80 36.01 0.10 0.12 16 25 O -0.53 -0.66 12.83 -35.23 -0.45 -1.11 16 26 Si 0.69 -0.84 29.88 -169.99 -5.08 -5.92 16 27 C -0.15 -0.23 8.67 -39.46 -0.34 -0.58 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 29 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 -0.03 7.66 -51.93 -0.40 -0.42 16 31 H 0.10 -0.30 7.65 -51.93 -0.40 -0.69 16 32 H 0.10 -0.35 7.67 -51.93 -0.40 -0.75 16 33 H 0.40 -1.97 8.70 -40.82 -0.36 -2.33 16 34 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 35 H 0.10 -0.50 8.10 -51.93 -0.42 -0.92 16 36 H 0.14 -0.94 7.84 -51.93 -0.41 -1.35 16 37 H 0.14 -0.99 8.14 -51.92 -0.42 -1.41 16 38 H 0.13 -0.84 8.14 -51.92 -0.42 -1.26 16 39 H 0.13 -0.58 8.14 -51.92 -0.42 -1.01 16 40 H 0.13 -0.83 8.14 -51.92 -0.42 -1.26 16 41 H 0.10 -0.23 7.90 -51.93 -0.41 -0.64 16 42 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 43 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 44 H 0.13 -0.32 4.83 -52.49 -0.25 -0.57 16 45 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 46 H 0.38 -0.55 8.70 45.56 0.40 -0.15 16 47 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 48 H -0.26 -0.13 7.00 56.52 0.40 0.26 16 49 H 0.14 0.08 6.30 -52.48 -0.33 -0.25 16 LS Contribution 419.15 15.07 6.32 6.32 Total: 0.00 -17.13 419.15 -10.92 -28.05 By element: Atomic # 1 Polarization: -10.47 SS G_CDS: -7.09 Total: -17.56 kcal Atomic # 6 Polarization: 8.40 SS G_CDS: -0.64 Total: 7.76 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.28 Total: 0.94 kcal Atomic # 8 Polarization: -10.12 SS G_CDS: -3.58 Total: -13.69 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.08 Total: -5.92 kcal Atomic # 16 Polarization: -5.32 SS G_CDS: -0.58 Total: -5.89 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -17.13 -10.92 -28.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.627 kcal (2) G-P(sol) polarization free energy of solvation -17.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.51 seconds