Wall clock time and date at job start Sun Mar 7 2021 05:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35661 * 116.99798 * 2 1 4 4 C 1.38400 * 120.11926 * 0.02585 * 3 2 1 5 5 C 1.38724 * 120.02993 * 179.97438 * 4 3 2 6 6 O 1.35718 * 119.86351 * 179.97438 * 5 4 3 7 7 C 1.42898 * 116.99920 * 0.02562 * 6 5 4 8 8 C 1.39144 * 120.27588 * 0.02562 * 5 4 3 9 9 C 1.50705 * 119.88311 * 180.02562 * 8 5 4 10 10 O 1.42898 * 109.46966 * 74.99331 * 9 8 5 11 11 Si 1.86299 * 109.47120 * 194.99625 * 9 8 5 12 12 C 1.37588 * 120.24146 * 359.66844 * 8 5 4 13 13 C 1.39821 * 119.95692 * 0.62989 * 12 8 5 14 14 C 1.47301 * 120.13199 * 179.67011 * 13 12 8 15 15 O 1.21629 * 119.99965 * 179.72303 * 14 13 12 16 16 N 1.34773 * 120.00329 * 359.72665 * 14 13 12 17 17 C 1.46501 * 120.00122 * 179.97438 * 16 14 13 18 18 H 1.08993 * 112.90929 * 336.25213 * 17 16 14 19 19 C 1.53962 * 113.66387 * 107.55425 * 17 16 14 20 20 C 1.53782 * 87.11063 * 139.88885 * 19 17 16 21 21 H 1.08997 * 113.61225 * 89.18406 * 20 19 17 22 22 C 1.52998 * 113.68747 * 220.07804 * 20 19 17 23 23 S 1.81404 * 109.47101 * 272.53379 * 22 20 19 24 24 C 1.81404 * 101.92094 * 180.02562 * 23 22 20 25 25 O 1.42101 * 108.58045 * 294.49021 * 23 22 20 26 26 O 1.42105 * 108.57447 * 65.51478 * 23 22 20 27 27 C 1.53781 * 87.08260 * 334.63747 * 20 19 17 28 28 H 1.09002 * 109.47268 * 59.99841 * 1 2 3 29 29 H 1.09006 * 109.47016 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47153 * 299.99638 * 1 2 3 31 31 H 1.07999 * 119.98720 * 359.97438 * 4 3 2 32 32 H 1.09001 * 109.47222 * 180.02562 * 7 6 5 33 33 H 1.09006 * 109.46868 * 299.99768 * 7 6 5 34 34 H 1.09000 * 109.47270 * 59.99394 * 7 6 5 35 35 H 1.09004 * 109.46607 * 314.99911 * 9 8 5 36 36 H 0.96707 * 114.00186 * 60.00536 * 10 9 8 37 37 H 1.48493 * 109.99860 * 58.68160 * 11 9 8 38 38 H 1.48501 * 109.99740 * 179.97438 * 11 9 8 39 39 H 1.07994 * 120.02225 * 180.30379 * 12 8 5 40 40 H 0.97002 * 120.00080 * 0.02562 * 16 14 13 41 41 H 1.08997 * 113.53543 * 25.33559 * 19 17 16 42 42 H 1.08994 * 113.66446 * 254.45762 * 19 17 16 43 43 H 1.08995 * 109.47742 * 32.53801 * 22 20 19 44 44 H 1.09003 * 109.47049 * 152.53819 * 22 20 19 45 45 H 1.09002 * 109.46512 * 60.00455 * 24 23 22 46 46 H 1.08995 * 109.46894 * 179.97438 * 24 23 22 47 47 H 1.08996 * 109.47205 * 300.00067 * 24 23 22 48 48 H 1.09002 * 113.61445 * 139.98212 * 27 20 19 49 49 H 1.09002 * 113.61408 * 270.79943 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2934 2.3710 0.0005 5 6 1.9251 3.6061 0.0011 6 8 1.1849 4.7437 0.0011 7 6 -0.2361 4.5931 0.0011 8 6 3.3143 3.6835 0.0005 9 6 3.9914 5.0299 0.0017 10 8 3.8942 5.6107 1.3037 11 14 5.7859 4.8231 -0.4538 12 6 4.0723 2.5353 0.0063 13 6 3.4460 1.2852 -0.0005 14 6 4.2538 0.0534 -0.0017 15 8 3.7065 -1.0328 -0.0025 16 7 5.5994 0.1299 -0.0017 17 6 6.4028 -1.0952 -0.0022 18 1 5.8670 -1.9541 0.4017 19 6 7.0973 -1.3781 -1.3469 20 6 8.3223 -1.8245 -0.5315 21 1 8.3122 -2.8832 -0.2725 22 6 9.6562 -1.3714 -1.1284 23 16 10.2282 -2.6010 -2.3333 24 6 11.7903 -1.8726 -2.8992 25 8 10.5164 -3.8100 -1.6444 26 8 9.3174 -2.6239 -3.4238 27 6 7.8085 -0.9103 0.5933 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 0.2148 2.3165 0.0005 32 1 -0.7058 5.5767 0.0006 33 1 -0.5432 4.0438 -0.8890 34 1 -0.5433 4.0437 0.8910 35 1 3.5050 5.6817 -0.7241 36 1 4.3068 5.0834 2.0015 37 1 5.9004 4.1907 -1.7925 38 1 6.4646 6.1439 -0.4568 39 1 5.1504 2.5995 0.0109 40 1 6.0360 0.9962 -0.0006 41 1 7.2723 -0.4827 -1.9432 42 1 6.6350 -2.1839 -1.9170 43 1 9.5244 -0.4101 -1.6249 44 1 10.3948 -1.2713 -0.3330 45 1 12.4658 -1.7580 -2.0514 46 1 12.2477 -2.5259 -3.6421 47 1 11.5960 -0.8964 -3.3435 48 1 7.9205 -1.3384 1.5894 49 1 8.1793 0.1127 0.5281 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:59:55 Heat of formation + Delta-G solvation = -141.952647 kcal Electronic energy + Delta-G solvation = -34303.736481 eV Core-core repulsion = 29520.510622 eV Total energy + Delta-G solvation = -4783.225860 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 2.22 seconds Orbital eigenvalues (eV) -42.08732 -40.99771 -40.10717 -39.20373 -38.42570 -37.94489 -36.98039 -36.95239 -34.76483 -32.24207 -32.00750 -31.01391 -30.26928 -29.09586 -28.25174 -26.82624 -26.15130 -25.17529 -23.73778 -22.54150 -21.49695 -20.86235 -20.01876 -19.86571 -18.77546 -18.20905 -17.95936 -17.78646 -17.41645 -17.22979 -17.09735 -16.83520 -16.61478 -16.37258 -16.28048 -16.14816 -15.78883 -15.73637 -15.62907 -15.41923 -14.80930 -14.63823 -14.36056 -14.25415 -14.22563 -14.06966 -13.70735 -13.62728 -13.55819 -13.36521 -13.18435 -13.03226 -12.94703 -12.77757 -12.70198 -12.57582 -12.55040 -12.27267 -12.14470 -12.04346 -11.99257 -11.66749 -11.52983 -11.22450 -10.67273 -10.42909 -9.99063 -9.91274 -9.14835 -5.19311 -1.06634 -0.22249 0.10035 1.20596 1.53747 1.70649 1.84453 1.90826 2.03242 2.12875 2.16883 2.60859 2.68081 2.92506 3.26179 3.30016 3.40445 3.45233 3.49970 3.59700 3.67517 3.71012 3.74314 3.80638 3.82064 3.95107 3.98174 4.03757 4.06955 4.10041 4.12983 4.13039 4.22027 4.30803 4.41338 4.48045 4.52886 4.58393 4.59342 4.65659 4.66992 4.75535 4.86541 4.92035 5.00683 5.03041 5.18892 5.27933 5.56849 5.99190 6.27754 6.56870 6.60176 7.37643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.199 4.199 9 C -0.050 4.050 10 O -0.535 6.535 11 Si 0.672 3.328 12 C -0.004 4.004 13 C -0.209 4.209 14 C 0.567 3.433 15 O -0.516 6.516 16 N -0.723 5.723 17 C 0.125 3.875 18 H 0.122 0.878 19 C -0.154 4.154 20 C -0.103 4.103 21 H 0.111 0.889 22 C -0.599 4.599 23 S 2.417 3.583 24 C -0.659 4.659 25 O -0.938 6.938 26 O -0.933 6.933 27 C -0.131 4.131 28 H 0.057 0.943 29 H 0.108 0.892 30 H 0.058 0.942 31 H 0.145 0.855 32 H 0.107 0.893 33 H 0.058 0.942 34 H 0.060 0.940 35 H 0.114 0.886 36 H 0.375 0.625 37 H -0.251 1.251 38 H -0.250 1.250 39 H 0.139 0.861 40 H 0.397 0.603 41 H 0.093 0.907 42 H 0.085 0.915 43 H 0.134 0.866 44 H 0.137 0.863 45 H 0.128 0.872 46 H 0.130 0.870 47 H 0.128 0.872 48 H 0.083 0.917 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.651 4.571 2.579 5.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.160 4.160 10 O -0.340 6.340 11 Si 0.573 3.427 12 C -0.023 4.023 13 C -0.213 4.213 14 C 0.355 3.645 15 O -0.391 6.391 16 N -0.375 5.375 17 C 0.020 3.980 18 H 0.139 0.861 19 C -0.193 4.193 20 C -0.123 4.123 21 H 0.129 0.871 22 C -0.728 4.728 23 S 2.599 3.401 24 C -0.808 4.808 25 O -0.935 6.935 26 O -0.931 6.931 27 C -0.170 4.170 28 H 0.076 0.924 29 H 0.126 0.874 30 H 0.076 0.924 31 H 0.162 0.838 32 H 0.125 0.875 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.132 0.868 36 H 0.222 0.778 37 H -0.176 1.176 38 H -0.175 1.175 39 H 0.156 0.844 40 H 0.232 0.768 41 H 0.111 0.889 42 H 0.104 0.896 43 H 0.152 0.848 44 H 0.155 0.845 45 H 0.147 0.853 46 H 0.148 0.852 47 H 0.146 0.854 48 H 0.102 0.898 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.298 3.652 1.395 4.119 hybrid contribution -0.456 1.422 -0.050 1.494 sum 0.842 5.074 1.346 5.316 Atomic orbital electron populations 1.23248 0.78186 1.04901 1.01326 1.86404 1.21211 1.24993 1.85724 1.18724 0.90651 0.84418 0.87684 1.21312 1.01168 0.91510 1.19378 1.18714 0.90448 0.84700 0.88662 1.86160 1.19482 1.28515 1.86565 1.23219 0.77800 1.04664 1.01657 1.19446 0.90868 0.96381 1.13349 1.24831 1.09685 0.92279 0.89243 1.86557 1.82067 1.49315 1.16073 0.95513 0.77381 0.84612 0.85220 1.20667 0.98391 0.90008 0.93201 1.19053 0.90683 0.93578 1.18027 1.17829 0.81851 0.88560 0.76273 1.90858 1.71355 1.28663 1.48255 1.45828 1.05880 1.09188 1.76594 1.22489 0.89963 0.88917 0.96588 0.86054 1.23746 0.95171 1.02986 0.97376 1.22073 0.90630 1.01184 0.98418 0.87137 1.30291 1.07574 1.17901 1.17053 1.07974 0.77658 0.77465 0.76979 1.30305 1.22953 1.14398 1.13166 1.93622 1.84795 1.40495 1.74635 1.93626 1.60984 1.86554 1.51887 1.23385 0.94521 1.00481 0.98632 0.92420 0.87415 0.92361 0.83762 0.87500 0.92292 0.92135 0.86817 0.77781 1.17592 1.17465 0.84392 0.76781 0.88879 0.89648 0.84756 0.84477 0.85327 0.85159 0.85352 0.89782 0.88859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.27 -0.94 8.56 -40.61 -0.35 -1.29 16 3 C 0.23 0.58 6.70 -38.73 -0.26 0.32 16 4 C -0.31 -0.23 8.01 -39.34 -0.31 -0.54 16 5 C 0.22 0.27 6.67 -39.07 -0.26 0.01 16 6 O -0.30 -0.37 9.80 -18.86 -0.18 -0.56 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 -0.04 5.27 -104.52 -0.55 -0.59 16 9 C -0.05 0.01 2.37 36.01 0.09 0.10 16 10 O -0.54 -0.15 12.88 -35.23 -0.45 -0.60 16 11 Si 0.67 -1.43 29.91 -169.99 -5.08 -6.51 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.37 5.89 -104.83 -0.62 -0.98 16 14 C 0.57 1.63 7.76 -12.58 -0.10 1.54 16 15 O -0.52 -3.56 14.75 -16.67 -0.25 -3.80 16 16 N -0.72 0.56 5.31 -54.04 -0.29 0.27 16 17 C 0.13 -0.10 4.25 -67.02 -0.28 -0.39 16 18 H 0.12 0.11 7.46 -51.93 -0.39 -0.27 16 19 C -0.15 0.13 7.44 -25.82 -0.19 -0.06 16 20 C -0.10 0.25 3.65 -89.81 -0.33 -0.08 16 21 H 0.11 -0.22 8.13 -51.93 -0.42 -0.64 16 22 C -0.60 2.80 5.64 37.16 0.21 3.01 16 23 S 2.42 -4.15 5.35 -107.50 -0.58 -4.72 16 24 C -0.66 3.00 10.62 101.05 1.07 4.08 16 25 O -0.94 -2.42 18.10 -57.83 -1.05 -3.46 16 26 O -0.93 -2.29 18.10 -57.83 -1.05 -3.34 16 27 C -0.13 0.46 7.39 -25.92 -0.19 0.27 16 28 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 31 H 0.14 -0.20 4.50 -52.49 -0.24 -0.44 16 32 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 34 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 35 H 0.11 0.12 7.82 -51.93 -0.41 -0.29 16 36 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 37 H -0.25 0.01 7.11 56.52 0.40 0.41 16 38 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 39 H 0.14 -0.60 3.44 -52.49 -0.18 -0.78 16 40 H 0.40 -1.60 6.74 -40.82 -0.28 -1.87 16 41 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 42 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 43 H 0.13 -0.93 7.85 -51.93 -0.41 -1.34 16 44 H 0.14 -0.96 8.14 -51.92 -0.42 -1.39 16 45 H 0.13 -0.81 8.14 -51.92 -0.42 -1.23 16 46 H 0.13 -0.54 8.14 -51.93 -0.42 -0.96 16 47 H 0.13 -0.80 8.14 -51.93 -0.42 -1.23 16 48 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 49 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 LS Contribution 412.73 15.07 6.22 6.22 Total: 0.00 -16.72 412.73 -10.03 -26.76 By element: Atomic # 1 Polarization: -10.32 SS G_CDS: -6.92 Total: -17.23 kcal Atomic # 6 Polarization: 8.34 SS G_CDS: -0.07 Total: 8.27 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.29 Total: 0.27 kcal Atomic # 8 Polarization: -9.73 SS G_CDS: -3.33 Total: -13.05 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.08 Total: -6.51 kcal Atomic # 16 Polarization: -4.15 SS G_CDS: -0.58 Total: -4.72 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -16.72 -10.03 -26.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.198 kcal (2) G-P(sol) polarization free energy of solvation -16.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.918 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.755 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.22 seconds