Wall clock time and date at job start Sun Mar 7 2021 06:03:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38559 * 120.06289 * 0.27790 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.25067 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38387 * 120.12893 * 0.29551 * 9 5 4 11 11 Cl 1.73598 * 120.00692 * 179.97438 * 10 9 5 12 12 C 1.38615 * 119.97911 * 359.97438 * 10 9 5 13 13 O 1.36023 * 120.07490 * 180.02562 * 12 10 9 14 14 C 1.42899 * 117.00068 * 90.00040 * 13 12 10 15 15 C 1.52999 * 109.47329 * 89.99714 * 14 13 12 16 16 C 1.50696 * 109.46958 * 209.99884 * 14 13 12 17 17 O 1.21280 * 120.00390 * 0.02562 * 16 14 13 18 18 N 1.34779 * 120.00065 * 179.97438 * 16 14 13 19 19 C 1.46497 * 120.00108 * 179.97438 * 18 16 14 20 20 H 1.09001 * 112.85004 * 336.20000 * 19 18 16 21 21 C 1.53788 * 113.61203 * 107.50581 * 19 18 16 22 22 C 1.53783 * 87.08010 * 139.98237 * 21 19 18 23 23 H 1.08993 * 113.61500 * 89.11664 * 22 21 19 24 24 C 1.52996 * 113.60874 * 220.01679 * 22 21 19 25 25 S 1.81404 * 109.47367 * 272.49307 * 24 22 21 26 26 C 1.81404 * 101.92266 * 180.02562 * 25 24 22 27 27 O 1.42096 * 108.57783 * 294.49295 * 25 24 22 28 28 O 1.42104 * 108.57370 * 65.51601 * 25 24 22 29 29 C 1.53784 * 87.08109 * 334.56460 * 22 21 19 30 30 H 1.09008 * 109.46708 * 299.99914 * 1 2 3 31 31 H 1.08999 * 109.47069 * 59.99656 * 1 2 3 32 32 H 1.08994 * 109.47414 * 180.02562 * 1 2 3 33 33 H 1.08003 * 119.99236 * 359.96832 * 4 3 2 34 34 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 35 35 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 36 36 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 37 37 H 1.48509 * 109.99497 * 181.32041 * 8 6 5 38 38 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 39 39 H 1.09000 * 109.46954 * 329.99944 * 14 13 12 40 40 H 1.08998 * 109.47648 * 179.97438 * 15 14 13 41 41 H 1.09001 * 109.47708 * 300.00499 * 15 14 13 42 42 H 1.09004 * 109.47058 * 59.99725 * 15 14 13 43 43 H 0.96996 * 119.99854 * 0.02562 * 18 16 14 44 44 H 1.09007 * 113.61146 * 254.52727 * 21 19 18 45 45 H 1.08995 * 113.61778 * 25.42759 * 21 19 18 46 46 H 1.08995 * 109.47564 * 32.49881 * 24 22 21 47 47 H 1.09000 * 109.46943 * 152.49709 * 24 22 21 48 48 H 1.08998 * 109.46689 * 60.00580 * 26 25 24 49 49 H 1.08997 * 109.46824 * 180.02562 * 26 25 24 50 50 H 1.09004 * 109.46820 * 300.00482 * 26 25 24 51 51 H 1.08992 * 113.61252 * 270.88655 * 29 22 21 52 52 H 1.08997 * 113.60983 * 139.97953 * 29 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0058 5 6 1.9221 3.6061 0.0006 6 6 1.1007 4.8696 0.0006 7 8 0.2767 4.9020 -1.1664 8 14 2.2349 6.3475 0.0013 9 6 3.3021 3.6810 0.0010 10 6 4.0606 2.5235 0.0005 11 17 5.7938 2.6212 0.0003 12 6 3.4360 1.2861 0.0001 13 8 4.1796 0.1471 0.0001 14 6 4.5339 -0.3964 1.2734 15 6 3.4525 -1.3789 1.7274 16 6 5.8527 -1.1169 1.1625 17 8 6.4325 -1.1604 0.0982 18 7 6.3886 -1.7123 2.2465 19 6 7.6704 -2.4132 2.1387 20 1 7.8878 -2.7440 1.1231 21 6 8.8375 -1.6696 2.8095 22 6 9.3245 -3.0419 3.3039 23 1 9.9954 -3.5442 2.6071 24 6 9.8600 -3.0222 4.7370 25 16 11.6237 -2.5983 4.7177 26 6 12.0371 -2.6339 6.4836 27 8 12.3333 -3.6428 4.0660 28 8 11.7637 -1.2651 4.2462 29 6 7.8636 -3.5105 3.1987 30 1 -0.3633 0.5139 0.8901 31 1 -0.3633 0.5139 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 0.2147 2.3192 0.0098 34 1 0.4716 4.8939 0.8904 35 1 -0.2805 5.6896 -1.2327 36 1 3.0980 6.3260 -1.2069 37 1 1.4372 7.5998 0.0335 38 1 3.7896 4.6446 0.0013 39 1 4.6206 0.4103 2.0013 40 1 3.7229 -1.7938 2.6983 41 1 2.4984 -0.8578 1.8075 42 1 3.3657 -2.1855 0.9994 43 1 5.9251 -1.6772 3.0979 44 1 9.5168 -1.1943 2.1018 45 1 8.5258 -1.0016 3.6124 46 1 9.3142 -2.2795 5.3187 47 1 9.7277 -4.0057 5.1878 48 1 11.8408 -3.6290 6.8827 49 1 13.0915 -2.3909 6.6149 50 1 11.4272 -1.9028 7.0143 51 1 7.2857 -3.3458 4.1079 52 1 7.7566 -4.5213 2.8051 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534806_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:03:09 Heat of formation + Delta-G solvation = -155.717543 kcal Electronic energy + Delta-G solvation = -38394.453135 eV Core-core repulsion = 33095.292973 eV Total energy + Delta-G solvation = -5299.160162 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.114 amu Computer time = 1.96 seconds Orbital eigenvalues (eV) -41.99221 -41.26753 -39.92640 -39.19158 -38.78765 -37.96127 -37.80942 -37.06254 -36.98703 -35.08861 -33.14282 -31.63129 -31.36208 -30.80831 -30.01459 -28.54449 -26.74481 -26.70042 -25.77853 -23.87165 -23.54027 -22.59131 -21.63258 -20.76393 -19.79707 -19.61857 -18.73039 -18.55011 -18.41070 -18.01354 -17.76476 -17.41460 -17.02438 -16.98079 -16.73061 -16.61858 -16.23978 -16.10241 -16.00000 -15.93979 -15.63755 -15.26285 -14.79395 -14.66296 -14.45779 -14.17586 -14.03670 -14.02223 -13.89184 -13.84241 -13.61083 -13.44682 -13.37304 -13.21194 -13.18611 -13.05215 -12.99216 -12.93105 -12.86151 -12.60911 -12.58683 -12.42173 -12.17965 -11.99901 -11.97503 -11.93168 -11.78108 -11.48265 -11.35080 -11.07320 -10.68671 -10.58301 -10.09733 -9.84481 -9.40723 -4.96284 -0.89338 -0.33845 -0.03081 0.84337 1.22226 1.47492 1.56390 1.67990 1.93134 1.93585 2.16316 2.21787 2.67273 2.79660 3.12686 3.21556 3.37849 3.45045 3.57212 3.58649 3.68936 3.73024 3.76666 3.83830 3.84634 4.01203 4.03482 4.06863 4.08371 4.11126 4.19311 4.28241 4.35039 4.37279 4.42623 4.54910 4.60790 4.70883 4.73375 4.74290 4.75776 4.77760 4.83173 4.84073 4.96581 4.99807 5.05269 5.09852 5.18551 5.20328 5.24442 5.53049 5.93142 6.33305 6.51581 6.56005 7.18061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.311 6.311 3 C 0.128 3.872 4 C -0.163 4.163 5 C -0.026 4.026 6 C -0.075 4.075 7 O -0.554 6.554 8 Si 0.744 3.256 9 C -0.137 4.137 10 C -0.024 4.024 11 Cl -0.050 7.050 12 C 0.054 3.946 13 O -0.310 6.310 14 C 0.072 3.928 15 C -0.160 4.160 16 C 0.514 3.486 17 O -0.565 6.565 18 N -0.698 5.698 19 C 0.112 3.888 20 H 0.089 0.911 21 C -0.159 4.159 22 C -0.112 4.112 23 H 0.094 0.906 24 C -0.577 4.577 25 S 2.400 3.600 26 C -0.642 4.642 27 O -0.996 6.996 28 O -0.989 6.989 29 C -0.108 4.108 30 H 0.078 0.922 31 H 0.060 0.940 32 H 0.119 0.881 33 H 0.163 0.837 34 H 0.117 0.883 35 H 0.400 0.600 36 H -0.305 1.305 37 H -0.275 1.275 38 H 0.153 0.847 39 H 0.106 0.894 40 H 0.104 0.896 41 H 0.081 0.919 42 H 0.056 0.944 43 H 0.420 0.580 44 H 0.052 0.948 45 H 0.113 0.887 46 H 0.170 0.830 47 H 0.173 0.827 48 H 0.154 0.846 49 H 0.126 0.874 50 H 0.155 0.845 51 H 0.127 0.873 52 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.838 -0.370 14.865 17.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.224 6.224 3 C 0.081 3.919 4 C -0.181 4.181 5 C -0.027 4.027 6 C -0.184 4.184 7 O -0.365 6.365 8 Si 0.650 3.350 9 C -0.156 4.156 10 C -0.052 4.052 11 Cl -0.020 7.020 12 C 0.008 3.992 13 O -0.226 6.226 14 C 0.013 3.987 15 C -0.217 4.217 16 C 0.300 3.700 17 O -0.443 6.443 18 N -0.352 5.352 19 C 0.007 3.993 20 H 0.107 0.893 21 C -0.198 4.198 22 C -0.132 4.132 23 H 0.112 0.888 24 C -0.709 4.709 25 S 2.590 3.410 26 C -0.794 4.794 27 O -0.994 6.994 28 O -0.987 6.987 29 C -0.147 4.147 30 H 0.096 0.904 31 H 0.079 0.921 32 H 0.138 0.862 33 H 0.181 0.819 34 H 0.135 0.865 35 H 0.251 0.749 36 H -0.233 1.233 37 H -0.202 1.202 38 H 0.170 0.830 39 H 0.124 0.876 40 H 0.123 0.877 41 H 0.100 0.900 42 H 0.075 0.925 43 H 0.259 0.741 44 H 0.071 0.929 45 H 0.131 0.869 46 H 0.188 0.812 47 H 0.191 0.809 48 H 0.173 0.827 49 H 0.145 0.855 50 H 0.174 0.826 51 H 0.145 0.855 52 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -8.012 -0.343 12.695 15.015 hybrid contribution -1.137 0.403 -0.351 1.256 sum -9.148 0.060 12.344 15.365 Atomic orbital electron populations 1.23467 0.76005 1.05954 1.02682 1.86210 1.23497 1.24981 1.87735 1.19173 0.90378 0.86174 0.96225 1.21310 1.01746 0.90014 1.05063 1.19205 0.91944 0.94711 0.96811 1.24819 0.99696 1.02162 0.91729 1.86536 1.58305 1.48184 1.43486 0.94292 0.79619 0.74114 0.86976 1.20821 0.93112 0.97186 1.04441 1.21045 0.85925 0.93662 1.04531 1.98417 1.08539 1.98472 1.96622 1.17760 0.87384 0.85316 1.08713 1.86251 1.69927 1.38042 1.28421 1.22388 0.92872 0.97643 0.85775 1.22255 0.98112 0.98768 1.02598 1.20694 0.86325 0.78794 0.84180 1.90743 1.63363 1.60230 1.29937 1.45694 1.22777 1.54678 1.12050 1.22508 0.82389 0.94134 1.00279 0.89260 1.23776 0.97617 0.96916 1.01442 1.22084 0.98743 0.98232 0.94108 0.88817 1.30121 1.21075 1.15685 1.03978 1.07962 0.79664 0.73773 0.79596 1.30124 1.13131 1.14064 1.22070 1.93549 1.72264 1.59097 1.74456 1.93558 1.86507 1.38390 1.80197 1.23343 0.93548 0.98487 0.99323 0.90378 0.92130 0.86231 0.81917 0.86489 0.74874 1.23261 1.20166 0.83024 0.87604 0.87747 0.89998 0.92476 0.74120 0.92867 0.86869 0.81194 0.80938 0.82724 0.85544 0.82633 0.85497 0.89386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.71 8.18 -79.56 -0.65 -1.36 16 3 C 0.13 0.51 6.54 22.56 0.15 0.66 16 4 C -0.16 -0.07 8.60 22.36 0.19 0.12 16 5 C -0.03 -0.02 5.42 -19.86 -0.11 -0.13 16 6 C -0.07 0.28 2.81 71.24 0.20 0.48 16 7 O -0.55 0.69 12.75 -148.98 -1.90 -1.20 16 8 Si 0.74 -2.14 29.78 68.60 2.04 -0.09 16 9 C -0.14 -0.41 8.45 22.30 0.19 -0.23 16 10 C -0.02 -0.17 6.33 22.40 0.14 -0.03 16 11 Cl -0.05 -0.46 28.50 -2.72 -0.08 -0.54 16 12 C 0.05 0.43 5.56 22.58 0.13 0.55 16 13 O -0.31 -3.46 8.48 -67.40 -0.57 -4.04 16 14 C 0.07 0.24 3.20 29.85 0.10 0.34 16 15 C -0.16 0.39 9.00 71.98 0.65 1.04 16 16 C 0.51 3.64 7.23 87.66 0.63 4.28 16 17 O -0.57 -10.45 16.10 16.01 0.26 -10.19 16 18 N -0.70 1.27 5.25 -440.03 -2.31 -1.04 16 19 C 0.11 -0.03 4.24 45.52 0.19 0.17 16 20 H 0.09 0.57 7.47 -2.39 -0.02 0.55 16 21 C -0.16 0.06 7.43 31.12 0.23 0.29 16 22 C -0.11 0.49 3.66 -10.27 -0.04 0.45 16 23 H 0.09 -0.10 8.13 -2.39 -0.02 -0.12 16 24 C -0.58 6.49 5.64 71.98 0.41 6.90 16 25 S 2.40 -6.14 5.35 -56.49 -0.30 -6.45 16 26 C -0.64 7.10 10.62 113.37 1.20 8.30 16 27 O -1.00 -7.64 18.10 -127.37 -2.30 -9.94 16 28 O -0.99 -7.15 18.10 -127.37 -2.31 -9.45 16 29 C -0.11 0.87 7.39 31.12 0.23 1.10 16 30 H 0.08 -0.75 7.65 -2.38 -0.02 -0.77 16 31 H 0.06 -0.34 7.67 -2.39 -0.02 -0.36 16 32 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 33 H 0.16 -0.66 6.30 -2.91 -0.02 -0.68 16 34 H 0.12 -1.17 7.96 -2.39 -0.02 -1.19 16 35 H 0.40 -3.75 8.74 -74.05 -0.65 -4.39 16 36 H -0.30 -1.93 7.11 99.48 0.71 -1.23 16 37 H -0.28 -0.08 7.11 99.48 0.71 0.63 16 38 H 0.15 0.02 4.86 -2.91 -0.01 0.01 16 39 H 0.11 -0.09 7.91 -2.39 -0.02 -0.11 16 40 H 0.10 -1.02 7.56 -2.39 -0.02 -1.04 16 41 H 0.08 -0.21 6.28 -2.39 -0.01 -0.23 16 42 H 0.06 0.09 8.14 -2.38 -0.02 0.08 16 43 H 0.42 -4.35 8.15 -92.71 -0.76 -5.10 16 44 H 0.05 0.32 8.14 -2.38 -0.02 0.30 16 45 H 0.11 -0.54 7.90 -2.39 -0.02 -0.56 16 46 H 0.17 -3.05 7.84 -2.39 -0.02 -3.07 16 47 H 0.17 -3.07 8.14 -2.39 -0.02 -3.09 16 48 H 0.15 -2.46 8.14 -2.39 -0.02 -2.47 16 49 H 0.13 -1.16 8.14 -2.39 -0.02 -1.18 16 50 H 0.16 -2.51 8.14 -2.39 -0.02 -2.52 16 51 H 0.13 -1.85 8.08 -2.39 -0.02 -1.87 16 52 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 Total: 0.00 -46.26 454.36 -2.89 -49.15 By element: Atomic # 1 Polarization: -29.81 SS G_CDS: -0.38 Total: -30.19 kcal Atomic # 6 Polarization: 19.74 SS G_CDS: 5.60 Total: 25.35 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -2.31 Total: -1.04 kcal Atomic # 8 Polarization: -28.71 SS G_CDS: -7.47 Total: -36.19 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: 2.04 Total: -0.09 kcal Atomic # 16 Polarization: -6.14 SS G_CDS: -0.30 Total: -6.45 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.08 Total: -0.54 kcal Total: -46.26 -2.89 -49.15 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.564 kcal (2) G-P(sol) polarization free energy of solvation -46.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.96 seconds