Wall clock time and date at job start Sun Mar 7 2021 06:03:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 O 1.42097 * 108.57715 * 2 1 4 4 O 1.42095 * 108.58150 * 228.96889 * 2 1 3 5 5 C 1.81405 * 101.91866 * 114.48422 * 2 1 3 6 6 C 1.53005 * 109.46946 * 180.02562 * 5 2 1 7 7 H 1.09001 * 112.84691 * 316.19331 * 6 5 2 8 8 C 1.53952 * 113.66849 * 87.43803 * 6 5 2 9 9 C 1.53785 * 87.01835 * 139.93409 * 8 6 5 10 10 H 1.08999 * 113.61452 * 89.23125 * 9 8 6 11 11 N 1.46502 * 113.61152 * 220.05013 * 9 8 6 12 12 C 1.34778 * 119.99802 * 254.13199 * 11 9 8 13 13 O 1.21276 * 120.00029 * 0.02562 * 12 11 9 14 14 C 1.50692 * 119.99924 * 179.97438 * 12 11 9 15 15 O 1.42900 * 109.47397 * 180.02562 * 14 12 11 16 16 C 1.35899 * 117.00511 * 180.02562 * 15 14 12 17 17 C 1.38726 * 120.05721 * 180.02562 * 16 15 14 18 18 C 1.38153 * 119.94564 * 180.02562 * 17 16 15 19 19 C 1.38269 * 120.05022 * 0.02562 * 18 17 16 20 20 C 1.50700 * 119.93900 * 179.97438 * 19 18 17 21 21 O 1.42896 * 109.47341 * 300.00123 * 20 19 18 22 22 Si 1.86300 * 109.46849 * 180.02562 * 20 19 18 23 23 C 1.38264 * 120.11486 * 0.25533 * 19 18 17 24 24 C 1.38143 * 120.05501 * 359.44957 * 23 19 18 25 25 C 1.53780 * 87.17240 * 334.63833 * 9 8 6 26 26 H 1.08999 * 109.47364 * 305.51555 * 1 2 3 27 27 H 1.08996 * 109.46927 * 65.51935 * 1 2 3 28 28 H 1.09003 * 109.46805 * 185.51132 * 1 2 3 29 29 H 1.08996 * 109.47330 * 60.00517 * 5 2 1 30 30 H 1.09005 * 109.47254 * 299.99779 * 5 2 1 31 31 H 1.08994 * 113.61133 * 25.41206 * 8 6 5 32 32 H 1.08995 * 113.66509 * 254.46125 * 8 6 5 33 33 H 0.96997 * 120.00147 * 74.13946 * 11 9 8 34 34 H 1.09007 * 109.47228 * 60.00286 * 14 12 11 35 35 H 1.09003 * 109.47771 * 300.00612 * 14 12 11 36 36 H 1.07998 * 120.03265 * 0.03855 * 17 16 15 37 37 H 1.07995 * 119.97802 * 179.97438 * 18 17 16 38 38 H 1.09000 * 109.46989 * 60.00454 * 20 19 18 39 39 H 0.96693 * 114.00306 * 299.99773 * 21 20 19 40 40 H 1.48506 * 110.00048 * 58.68772 * 22 20 19 41 41 H 1.48502 * 109.99996 * 180.02562 * 22 20 19 42 42 H 1.08002 * 119.97450 * 179.70367 * 23 19 18 43 43 H 1.08001 * 120.02763 * 180.30227 * 24 23 19 44 44 H 1.09005 * 113.61514 * 139.93921 * 25 9 8 45 45 H 1.09000 * 113.61531 * 270.84147 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2668 -0.8842 -1.0160 5 6 2.1887 -0.7356 1.6153 6 6 3.7055 -0.8184 1.7986 7 1 4.2206 -1.1761 0.9071 8 6 4.3258 0.4560 2.3996 9 6 5.2283 -0.4717 3.2302 10 1 6.1613 -0.7342 2.7315 11 7 5.4284 -0.0162 4.6081 12 6 6.6068 0.5259 4.9743 13 8 7.5013 0.6370 4.1630 14 6 6.8123 0.9950 6.3915 15 8 8.1311 1.5274 6.5305 16 6 8.4809 1.9970 7.7569 17 6 9.7458 2.5283 7.9627 18 6 10.0991 3.0046 9.2105 19 6 9.1933 2.9516 10.2538 20 6 9.5815 3.4714 11.6140 21 8 10.7104 2.7414 12.0985 22 14 8.1532 3.2583 12.7910 23 6 7.9340 2.4173 10.0527 24 6 7.5738 1.9453 8.8054 25 6 4.1317 -1.5403 3.0877 26 1 -0.3634 0.5970 0.8365 27 1 -0.3633 0.4258 -0.9353 28 1 -0.3633 -1.0230 0.0987 29 1 1.7611 -1.7369 1.6666 30 1 1.7610 -0.1169 2.4043 31 1 3.6284 1.0394 3.0007 32 1 4.8706 1.0611 1.6750 33 1 4.7128 -0.1048 5.2569 34 1 6.6855 0.1548 7.0744 35 1 6.0818 1.7687 6.6279 36 1 10.4537 2.5697 7.1482 37 1 11.0838 3.4179 9.3714 38 1 9.8369 4.5284 11.5397 39 1 10.5548 1.7915 12.1899 40 1 7.7752 1.8247 12.8767 41 1 8.5231 3.7676 14.1360 42 1 7.2299 2.3727 10.8705 43 1 6.5883 1.5325 8.6476 44 1 4.5201 -2.5446 2.9178 45 1 3.3812 -1.5037 3.8773 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:03:53 Heat of formation + Delta-G solvation = -109.765658 kcal Electronic energy + Delta-G solvation = -28170.994253 eV Core-core repulsion = 23863.383937 eV Total energy + Delta-G solvation = -4307.610316 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.122 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -41.67546 -41.07201 -39.78518 -38.85350 -38.01575 -37.22203 -37.04853 -35.02784 -32.47597 -31.81417 -31.47520 -30.58237 -29.40335 -26.98110 -26.29220 -24.60796 -23.70146 -22.37431 -21.75701 -20.96212 -19.95665 -19.56054 -18.54206 -18.18199 -17.97169 -17.56038 -17.51180 -17.16989 -16.96658 -16.74552 -16.32042 -16.29014 -16.13108 -15.63011 -15.60376 -15.09460 -14.82084 -14.69213 -14.41655 -14.32969 -14.31404 -13.89386 -13.76467 -13.70984 -13.61310 -13.45432 -13.34395 -13.10551 -13.01618 -12.78619 -12.31602 -12.25173 -12.17530 -12.12755 -12.11004 -11.68121 -11.64475 -11.34308 -10.91434 -10.60456 -10.23255 -10.06486 -9.24868 -4.99682 -1.13824 0.26244 0.27500 1.26875 1.38474 1.41363 1.55835 1.63481 1.94096 2.45184 2.56387 2.63031 2.84324 3.12698 3.17663 3.33810 3.36934 3.43499 3.51715 3.65166 3.68481 3.69728 3.70377 3.82818 3.83614 3.85158 3.86207 3.99665 4.20495 4.23994 4.41458 4.43630 4.50373 4.51419 4.52427 4.54426 4.63655 4.72041 4.89518 4.92792 4.99104 5.12368 5.22309 5.32402 5.47834 5.65550 6.17556 6.31946 6.40133 7.02646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.933 6.933 4 O -0.937 6.937 5 C -0.600 4.600 6 C -0.103 4.103 7 H 0.111 0.889 8 C -0.153 4.153 9 C 0.124 3.876 10 H 0.121 0.879 11 N -0.718 5.718 12 C 0.516 3.484 13 O -0.509 6.509 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.134 3.866 17 C -0.145 4.145 18 C -0.051 4.051 19 C -0.155 4.155 20 C -0.070 4.070 21 O -0.530 6.530 22 Si 0.682 3.318 23 C -0.075 4.075 24 C -0.207 4.207 25 C -0.130 4.130 26 H 0.128 0.872 27 H 0.131 0.869 28 H 0.128 0.872 29 H 0.137 0.863 30 H 0.134 0.866 31 H 0.094 0.906 32 H 0.087 0.913 33 H 0.403 0.597 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.136 0.864 37 H 0.135 0.865 38 H 0.118 0.882 39 H 0.376 0.624 40 H -0.261 1.261 41 H -0.257 1.257 42 H 0.130 0.870 43 H 0.131 0.869 44 H 0.084 0.916 45 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.087 -2.177 4.083 10.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.930 6.930 4 O -0.935 6.935 5 C -0.729 4.729 6 C -0.123 4.123 7 H 0.130 0.870 8 C -0.191 4.191 9 C 0.019 3.981 10 H 0.139 0.861 11 N -0.371 5.371 12 C 0.301 3.699 13 O -0.382 6.382 14 C -0.039 4.039 15 O -0.200 6.200 16 C 0.089 3.911 17 C -0.164 4.164 18 C -0.069 4.069 19 C -0.156 4.156 20 C -0.180 4.180 21 O -0.337 6.337 22 Si 0.584 3.416 23 C -0.093 4.093 24 C -0.225 4.225 25 C -0.169 4.169 26 H 0.147 0.853 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.155 0.845 30 H 0.152 0.848 31 H 0.113 0.887 32 H 0.105 0.895 33 H 0.238 0.762 34 H 0.113 0.887 35 H 0.114 0.886 36 H 0.154 0.846 37 H 0.153 0.847 38 H 0.136 0.864 39 H 0.223 0.777 40 H -0.186 1.186 41 H -0.182 1.182 42 H 0.147 0.853 43 H 0.149 0.851 44 H 0.103 0.897 45 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -7.744 -1.569 3.389 8.597 hybrid contribution -0.629 -1.359 1.006 1.804 sum -8.373 -2.928 4.395 9.899 Atomic orbital electron populations 1.30301 1.26835 1.11608 1.12041 1.07970 0.78335 0.76012 0.77745 1.93626 1.78828 1.34189 1.86357 1.93625 1.79007 1.67076 1.53752 1.30300 1.04722 1.14200 1.23666 1.22102 0.90856 0.99328 0.99979 0.87044 1.23738 0.99210 0.96357 0.99843 1.22540 0.98947 0.94910 0.81696 0.86070 1.45779 1.15245 1.63499 1.12605 1.20084 0.82660 0.77968 0.89196 1.90796 1.41615 1.53083 1.52739 1.22482 0.85332 1.00290 0.95816 1.86179 1.30551 1.74791 1.28491 1.19082 0.94156 0.94242 0.83639 1.20544 0.94737 1.02568 0.98523 1.20868 0.99302 0.95989 0.90725 1.20203 0.94978 1.03722 0.96704 1.24960 0.97914 0.99151 0.95984 1.86599 1.36118 1.24015 1.86931 0.95127 0.82837 0.84131 0.79551 1.20782 0.95487 0.96459 0.96555 1.21163 1.00278 1.07634 0.93454 1.23373 0.97741 0.98958 0.96829 0.85319 0.85072 0.85313 0.84479 0.84775 0.88746 0.89469 0.76247 0.88742 0.88600 0.84606 0.84732 0.86413 0.77679 1.18619 1.18242 0.85267 0.85079 0.89716 0.88854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.30 10.62 101.05 1.07 4.37 16 2 S 2.42 -5.26 5.35 -107.50 -0.58 -5.83 16 3 O -0.93 -1.79 18.10 -57.83 -1.05 -2.84 16 4 O -0.94 -2.06 18.10 -57.83 -1.05 -3.11 16 5 C -0.60 3.12 5.65 37.16 0.21 3.33 16 6 C -0.10 0.31 3.66 -89.71 -0.33 -0.02 16 7 H 0.11 -0.28 8.13 -51.93 -0.42 -0.70 16 8 C -0.15 0.27 7.45 -25.83 -0.19 0.08 16 9 C 0.12 -0.23 4.21 -67.12 -0.28 -0.51 16 10 H 0.12 0.01 7.50 -51.93 -0.39 -0.37 16 11 N -0.72 1.92 5.36 -53.02 -0.28 1.63 16 12 C 0.52 0.39 7.91 -10.99 -0.09 0.30 16 13 O -0.51 -3.06 16.12 -14.35 -0.23 -3.29 16 14 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 15 O -0.29 -0.70 9.67 -39.33 -0.38 -1.08 16 16 C 0.13 0.19 6.69 -39.22 -0.26 -0.08 16 17 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 18 C -0.05 -0.04 9.61 -39.60 -0.38 -0.42 16 19 C -0.16 0.00 5.39 -104.60 -0.56 -0.57 16 20 C -0.07 0.03 2.82 36.01 0.10 0.13 16 21 O -0.53 -0.62 12.76 -35.23 -0.45 -1.07 16 22 Si 0.68 -0.89 29.78 -169.99 -5.06 -5.95 16 23 C -0.08 0.07 8.66 -39.61 -0.34 -0.28 16 24 C -0.21 0.16 9.04 -39.43 -0.36 -0.20 16 25 C -0.13 0.54 7.39 -25.92 -0.19 0.35 16 26 H 0.13 -0.87 8.14 -51.92 -0.42 -1.30 16 27 H 0.13 -0.60 8.14 -51.93 -0.42 -1.02 16 28 H 0.13 -0.86 8.14 -51.92 -0.42 -1.28 16 29 H 0.14 -1.01 8.14 -51.93 -0.42 -1.44 16 30 H 0.13 -1.01 7.85 -51.92 -0.41 -1.41 16 31 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 32 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.40 -2.50 8.71 -40.82 -0.36 -2.86 16 34 H 0.09 -0.40 7.66 -51.93 -0.40 -0.79 16 35 H 0.10 -0.41 7.67 -51.93 -0.40 -0.81 16 36 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 37 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 38 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 39 H 0.38 -0.60 8.70 45.56 0.40 -0.20 16 40 H -0.26 -0.14 7.11 56.52 0.40 0.27 16 41 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 42 H 0.13 -0.37 4.87 -52.49 -0.26 -0.63 16 43 H 0.13 -0.48 6.30 -52.49 -0.33 -0.81 16 44 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 45 H 0.09 -0.56 8.07 -51.93 -0.42 -0.98 16 LS Contribution 390.03 15.07 5.88 5.88 Total: 0.00 -15.88 390.03 -11.39 -27.27 By element: Atomic # 1 Polarization: -11.23 SS G_CDS: -6.38 Total: -17.61 kcal Atomic # 6 Polarization: 7.81 SS G_CDS: -1.81 Total: 6.00 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -0.28 Total: 1.63 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -3.15 Total: -11.39 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.06 Total: -5.95 kcal Atomic # 16 Polarization: -5.26 SS G_CDS: -0.58 Total: -5.83 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -15.88 -11.39 -27.27 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.491 kcal (2) G-P(sol) polarization free energy of solvation -15.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds