Wall clock time and date at job start Sun Mar 7 2021 06:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42903 * 109.46870 * 2 1 4 4 C 1.35899 * 116.99787 * 84.95143 * 3 2 1 5 5 C 1.38735 * 120.05687 * 174.27710 * 4 3 2 6 6 C 1.38146 * 119.94170 * 179.74919 * 5 4 3 7 7 C 1.38266 * 120.06077 * 0.49990 * 6 5 4 8 8 C 1.50692 * 119.94633 * 179.75259 * 7 6 5 9 9 O 1.42902 * 109.46871 * 245.02181 * 8 7 6 10 10 Si 1.86294 * 109.47459 * 5.02074 * 8 7 6 11 11 C 1.38269 * 120.10788 * 359.77314 * 7 6 5 12 12 C 1.38150 * 120.05694 * 359.97438 * 11 7 6 13 13 C 1.50696 * 109.47287 * 240.00342 * 2 1 3 14 14 O 1.21284 * 119.99909 * 114.99590 * 13 2 1 15 15 N 1.34775 * 120.00034 * 294.99774 * 13 2 1 16 16 C 1.46504 * 119.99971 * 179.97438 * 15 13 2 17 17 H 1.08993 * 112.84986 * 336.19924 * 16 15 13 18 18 C 1.53783 * 113.61142 * 107.50631 * 16 15 13 19 19 C 1.53780 * 87.08370 * 89.11552 * 18 16 15 20 20 H 1.08999 * 113.61179 * 270.88333 * 19 18 16 21 21 C 1.52991 * 113.68988 * 139.99256 * 19 18 16 22 22 C 1.47196 * 109.47234 * 87.46508 * 21 19 18 23 23 N 7.93683 * 110.14313 * 186.51673 * 2 1 3 24 24 C 1.53776 * 113.61472 * 204.99685 * 16 15 13 25 25 H 1.08994 * 109.47126 * 299.99790 * 1 2 3 26 26 H 1.09005 * 109.47391 * 59.99639 * 1 2 3 27 27 H 1.09006 * 109.47113 * 179.97438 * 1 2 3 28 28 H 1.08997 * 109.47633 * 120.00089 * 2 1 3 29 29 H 1.07999 * 120.02498 * 359.97438 * 5 4 3 30 30 H 1.08003 * 119.96843 * 180.23143 * 6 5 4 31 31 H 1.09002 * 109.47328 * 125.02375 * 8 7 6 32 32 H 0.96705 * 113.99696 * 180.02562 * 9 8 7 33 33 H 1.48500 * 110.00279 * 178.68389 * 10 8 7 34 34 H 1.48503 * 110.00106 * 300.00272 * 10 8 7 35 35 H 1.07995 * 119.97457 * 179.97438 * 11 7 6 36 36 H 1.07995 * 120.03029 * 179.97438 * 12 11 7 37 37 H 0.96993 * 120.00139 * 0.02562 * 15 13 2 38 38 H 1.09002 * 113.61162 * 203.66576 * 18 16 15 39 39 H 1.09002 * 113.61558 * 334.56171 * 18 16 15 40 40 H 1.08999 * 109.46951 * 207.46500 * 21 19 18 41 41 H 1.09001 * 109.47698 * 327.46076 * 21 19 18 42 42 H 1.09008 * 113.61407 * 25.43876 * 24 16 15 43 43 H 1.08998 * 113.61644 * 156.25211 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9645 1.2062 5 6 2.6774 3.2281 1.2932 6 6 2.7784 3.8555 2.5198 7 6 2.3254 3.2209 3.6617 8 6 2.4419 3.9053 4.9992 9 8 3.3411 3.1715 5.8329 10 14 3.0907 5.6348 4.7574 11 6 1.7660 1.9591 3.5784 12 6 1.6580 1.3296 2.3534 13 6 2.0323 -0.7103 -1.2305 14 8 2.6529 -0.0977 -2.0734 15 7 1.7920 -2.0263 -1.3942 16 6 2.2799 -2.7167 -2.5907 17 1 2.4403 -2.0429 -3.4323 18 6 3.4648 -3.6584 -2.3184 19 6 2.4259 -4.7581 -2.0425 20 1 2.1028 -4.8024 -1.0024 21 6 2.8167 -6.1273 -2.6021 22 6 3.6333 -6.8473 -1.6115 23 7 4.2632 -7.4032 -0.8457 24 6 1.4676 -3.9714 -2.9522 25 1 -0.3633 0.5138 0.8899 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 1.8934 -0.5138 0.8899 29 1 3.0355 3.7224 0.4022 30 1 3.2156 4.8407 2.5875 31 1 1.4608 3.9480 5.4722 32 1 3.4642 3.5553 6.7120 33 1 3.1802 6.3313 6.0659 34 1 4.4280 5.5902 4.1133 35 1 1.4133 1.4653 4.4717 36 1 1.2214 0.3439 2.2889 37 1 1.2953 -2.5161 -0.7203 38 1 4.0809 -3.8502 -3.1969 39 1 4.0504 -3.3811 -1.4419 40 1 1.9161 -6.7023 -2.8175 41 1 3.3910 -5.9947 -3.5190 42 1 0.4407 -3.9469 -2.5874 43 1 1.5365 -4.2480 -4.0043 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_10157680.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:06:19 Heat of formation + Delta-G solvation = -18.804119 kcal Electronic energy + Delta-G solvation = -25432.487396 eV Core-core repulsion = 21638.919174 eV Total energy + Delta-G solvation = -3793.568222 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.89266 -41.13919 -39.86319 -38.80328 -37.44826 -37.28794 -34.94911 -33.26940 -32.06931 -31.63189 -30.96766 -26.95332 -26.77021 -25.81543 -24.56277 -23.91282 -22.42486 -21.53921 -20.54058 -19.43813 -18.97814 -18.54385 -18.31855 -17.34258 -16.89005 -16.81004 -16.72296 -16.21540 -16.17062 -15.94260 -15.52218 -15.40567 -15.00836 -14.68997 -14.42403 -14.34831 -14.07489 -13.91073 -13.89485 -13.82335 -13.66874 -13.59018 -13.40791 -13.23919 -12.95772 -12.61534 -12.35390 -12.19698 -12.07235 -11.97013 -11.72123 -11.63503 -11.42393 -10.85309 -10.48200 -10.23274 -10.00553 -9.16456 -4.96471 0.27705 0.38194 1.28474 1.41955 1.42859 1.59251 1.76667 1.81275 1.95760 2.41884 2.64172 2.84523 3.21947 3.34611 3.36990 3.38042 3.53371 3.58733 3.65196 3.73775 3.81125 3.84686 3.90863 4.03135 4.20038 4.27088 4.29273 4.33486 4.38146 4.42384 4.50687 4.52621 4.58441 4.61964 4.66569 4.82434 4.84643 4.87910 4.94236 5.01179 5.20737 5.32130 5.38928 5.53318 5.67971 6.20143 6.36643 6.43807 6.58886 7.04042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.134 3.866 5 C -0.141 4.141 6 C -0.074 4.074 7 C -0.110 4.110 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.681 3.319 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.522 3.478 14 O -0.508 6.508 15 N -0.711 5.711 16 C 0.120 3.880 17 H 0.109 0.891 18 C -0.151 4.151 19 C -0.111 4.111 20 H 0.097 0.903 21 C -0.017 4.017 22 C 0.202 3.798 23 N -0.435 5.435 24 C -0.135 4.135 25 H 0.079 0.921 26 H 0.078 0.922 27 H 0.079 0.921 28 H 0.100 0.900 29 H 0.138 0.862 30 H 0.134 0.866 31 H 0.075 0.925 32 H 0.379 0.621 33 H -0.262 1.262 34 H -0.255 1.255 35 H 0.128 0.872 36 H 0.131 0.869 37 H 0.402 0.598 38 H 0.099 0.901 39 H 0.073 0.927 40 H 0.113 0.887 41 H 0.112 0.888 42 H 0.080 0.920 43 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.310 -0.002 -1.079 7.389 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.006 3.994 3 O -0.195 6.195 4 C 0.089 3.911 5 C -0.159 4.159 6 C -0.091 4.091 7 C -0.111 4.111 8 C -0.181 4.181 9 O -0.344 6.344 10 Si 0.583 3.417 11 C -0.068 4.068 12 C -0.230 4.230 13 C 0.307 3.693 14 O -0.381 6.381 15 N -0.364 5.364 16 C 0.015 3.985 17 H 0.127 0.873 18 C -0.189 4.189 19 C -0.130 4.130 20 H 0.115 0.885 21 C -0.057 4.057 22 C -0.116 4.116 23 N -0.111 5.111 24 C -0.174 4.174 25 H 0.098 0.902 26 H 0.097 0.903 27 H 0.098 0.902 28 H 0.117 0.883 29 H 0.156 0.844 30 H 0.152 0.848 31 H 0.093 0.907 32 H 0.227 0.773 33 H -0.187 1.187 34 H -0.179 1.179 35 H 0.146 0.854 36 H 0.149 0.851 37 H 0.237 0.763 38 H 0.118 0.882 39 H 0.092 0.908 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.099 0.901 43 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -5.186 -0.097 -1.100 5.303 hybrid contribution -0.186 -0.859 1.377 1.633 sum -5.372 -0.956 0.277 5.463 Atomic orbital electron populations 1.22353 0.92153 1.03920 1.05006 1.22181 0.96020 0.83361 0.97844 1.86220 1.80961 1.25338 1.27029 1.19061 0.95195 0.92875 0.83958 1.20388 1.03209 0.93657 0.98688 1.20821 0.97535 0.99309 0.91449 1.19145 1.02722 0.96155 0.93048 1.24722 0.96527 1.05733 0.91071 1.86599 1.66402 1.52665 1.28773 0.95071 0.85486 0.76873 0.84320 1.20772 0.95743 0.93457 0.96869 1.21294 1.07373 1.01753 0.92609 1.20090 0.79771 0.82026 0.87457 1.90782 1.38475 1.65645 1.43198 1.45519 1.58267 1.08790 1.23853 1.21836 0.94900 0.93351 0.88431 0.87275 1.23603 0.96762 0.95236 1.03330 1.22634 0.98016 0.91921 1.00476 0.88451 1.19337 0.98235 0.94108 0.94029 1.29253 0.94045 0.93773 0.94551 1.81330 1.09886 1.09498 1.10419 1.23384 0.98772 0.94010 1.01190 0.90189 0.90331 0.90228 0.88260 0.84369 0.84849 0.90719 0.77320 1.18696 1.17927 0.85444 0.85085 0.76318 0.88247 0.90774 0.86874 0.86987 0.90097 0.87658 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.51 9.12 37.16 0.34 0.85 16 2 C 0.07 -0.04 2.64 -27.89 -0.07 -0.11 16 3 O -0.28 -0.81 9.34 -39.29 -0.37 -1.17 16 4 C 0.13 0.28 6.60 -39.21 -0.26 0.02 16 5 C -0.14 -0.27 9.99 -39.43 -0.39 -0.66 16 6 C -0.07 -0.08 8.66 -39.60 -0.34 -0.43 16 7 C -0.11 -0.15 5.38 -104.60 -0.56 -0.71 16 8 C -0.07 0.00 2.79 36.00 0.10 0.10 16 9 O -0.54 -0.72 12.81 -35.23 -0.45 -1.17 16 10 Si 0.68 -0.47 29.85 -169.99 -5.07 -5.55 16 11 C -0.05 -0.05 9.68 -39.60 -0.38 -0.43 16 12 C -0.21 -0.12 8.24 -39.43 -0.33 -0.44 16 13 C 0.52 0.51 7.18 -10.99 -0.08 0.43 16 14 O -0.51 -2.96 16.11 -14.31 -0.23 -3.19 16 15 N -0.71 1.90 5.22 -53.02 -0.28 1.62 16 16 C 0.12 -0.35 4.32 -67.12 -0.29 -0.64 16 17 H 0.11 -0.11 7.46 -51.93 -0.39 -0.49 16 18 C -0.15 0.49 7.43 -25.92 -0.19 0.30 16 19 C -0.11 0.58 3.49 -89.81 -0.31 0.26 16 20 H 0.10 -0.50 8.12 -51.93 -0.42 -0.92 16 21 C -0.02 0.09 5.54 -29.52 -0.16 -0.07 16 22 C 0.20 -0.06 15.42 -20.74 -0.32 -0.38 16 23 N -0.43 -1.72 18.54 42.18 0.78 -0.94 16 24 C -0.14 0.79 7.39 -25.92 -0.19 0.60 16 25 H 0.08 -0.24 6.91 -51.93 -0.36 -0.60 16 26 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.43 7.92 -51.93 -0.41 -0.84 16 28 H 0.10 -0.25 6.31 -51.93 -0.33 -0.57 16 29 H 0.14 0.14 8.06 -52.49 -0.42 -0.29 16 30 H 0.13 -0.08 4.86 -52.48 -0.26 -0.33 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.38 -0.99 8.74 45.56 0.40 -0.60 16 33 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 34 H -0.25 -0.63 7.05 56.52 0.40 -0.24 16 35 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 36 H 0.13 -0.25 5.43 -52.49 -0.28 -0.54 16 37 H 0.40 -2.24 8.48 -40.82 -0.35 -2.59 16 38 H 0.10 -0.40 7.90 -51.93 -0.41 -0.81 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.11 -0.82 8.14 -51.93 -0.42 -1.24 16 41 H 0.11 -0.77 7.85 -51.93 -0.41 -1.18 16 42 H 0.08 -0.51 8.14 -51.92 -0.42 -0.93 16 43 H 0.11 -0.72 8.10 -51.93 -0.42 -1.14 16 LS Contribution 364.63 15.07 5.49 5.49 Total: 0.00 -12.17 364.63 -9.36 -21.53 By element: Atomic # 1 Polarization: -9.53 SS G_CDS: -5.78 Total: -15.31 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -3.45 Total: -1.32 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: 0.51 Total: 0.69 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -1.05 Total: -5.53 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.07 Total: -5.55 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -12.17 -9.36 -21.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_10157680.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.725 kcal (2) G-P(sol) polarization free energy of solvation -12.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds