Wall clock time and date at job start Sun Mar 7 2021 06:06:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35532 * 125.67486 * 2 1 4 4 C 1.35452 * 108.87223 * 180.02562 * 3 2 1 5 5 C 1.50697 * 126.06985 * 179.74044 * 4 3 2 6 6 O 1.42897 * 109.46970 * 245.02272 * 5 4 3 7 7 Si 1.86305 * 109.46897 * 5.01746 * 5 4 3 8 8 C 1.39834 * 107.86239 * 359.97438 * 4 3 2 9 9 C 1.37645 * 125.67822 * 180.02562 * 2 1 3 10 10 C 1.46671 * 126.23491 * 0.03584 * 9 2 1 11 11 O 1.21691 * 120.00409 * 5.59559 * 10 9 2 12 12 N 1.34783 * 120.00115 * 185.59873 * 10 9 2 13 13 C 1.46501 * 120.00154 * 185.20713 * 12 10 9 14 14 H 1.08999 * 112.85166 * 23.79380 * 13 12 10 15 15 C 1.53776 * 113.61400 * 154.99895 * 13 12 10 16 16 C 1.53776 * 87.08219 * 89.11265 * 15 13 12 17 17 H 1.08999 * 113.61346 * 270.87885 * 16 15 13 18 18 C 1.53008 * 113.61437 * 140.06454 * 16 15 13 19 19 C 1.47195 * 109.47149 * 174.99789 * 18 16 15 20 20 N 9.15540 * 111.61641 * 152.67882 * 2 1 3 21 21 C 1.53779 * 87.08224 * 25.43262 * 16 15 13 22 22 H 1.08999 * 109.47342 * 85.90701 * 1 2 3 23 23 H 1.09006 * 109.47038 * 205.90366 * 1 2 3 24 24 H 1.09004 * 109.47502 * 325.90489 * 1 2 3 25 25 H 1.08004 * 125.56616 * 359.97438 * 3 2 1 26 26 H 1.08994 * 109.47363 * 125.02076 * 5 4 3 27 27 H 0.96701 * 114.00264 * 60.00160 * 6 5 4 28 28 H 1.48501 * 109.99886 * 180.02562 * 7 5 4 29 29 H 1.48498 * 110.00313 * 301.32032 * 7 5 4 30 30 H 1.07999 * 126.45771 * 179.97438 * 8 4 3 31 31 H 0.97003 * 119.99907 * 5.19984 * 12 10 9 32 32 H 1.09011 * 113.61145 * 203.66312 * 15 13 12 33 33 H 1.08997 * 113.61631 * 334.47901 * 15 13 12 34 34 H 1.09000 * 109.46864 * 294.99887 * 18 16 15 35 35 H 1.09001 * 109.47058 * 54.99402 * 18 16 15 36 36 H 1.09004 * 113.61426 * 220.01882 * 21 16 15 37 37 H 1.09001 * 113.61730 * 89.11751 * 21 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0006 5 6 4.7536 1.6190 -0.0063 6 8 5.4746 1.4479 -1.2281 7 14 4.1927 3.3895 0.1411 8 6 3.5779 -0.6887 -0.0004 9 6 2.2678 -1.1181 -0.0005 10 6 1.8124 -2.5123 -0.0019 11 8 0.6266 -2.7651 -0.1054 12 7 2.7074 -3.5137 0.1117 13 6 2.2672 -4.9062 -0.0040 14 1 1.3408 -5.0118 -0.5686 15 6 3.3782 -5.8678 -0.4578 16 6 3.7242 -6.0449 1.0300 17 1 4.4501 -5.3201 1.3987 18 6 4.0763 -7.4845 1.4103 19 6 4.5061 -7.5292 2.8174 20 7 4.8378 -7.5620 3.9066 21 6 2.2654 -5.6648 1.3337 22 1 -0.3634 0.0733 -1.0250 23 1 -0.3633 -0.9245 0.4490 24 1 -0.3634 0.8510 0.5761 25 1 1.9081 2.1236 -0.0004 26 1 5.4006 1.3716 0.8352 27 1 4.9593 1.6510 -2.0207 28 1 5.3684 4.2968 0.1360 29 1 3.2843 3.7299 -0.9833 30 1 4.4583 -1.3143 -0.0011 31 1 3.6430 -3.3124 0.2699 32 1 3.0036 -6.7760 -0.9301 33 1 4.1653 -5.3838 -1.0359 34 1 3.2007 -8.1199 1.2775 35 1 4.8845 -7.8416 0.7720 36 1 2.1549 -5.0166 2.2031 37 1 1.5866 -6.5174 1.3512 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:06:23 Heat of formation + Delta-G solvation = 34.852185 kcal Electronic energy + Delta-G solvation = -20759.053695 eV Core-core repulsion = 17504.832225 eV Total energy + Delta-G solvation = -3254.221470 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 276.126 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.56712 -41.03099 -39.31899 -37.81763 -37.39764 -34.92228 -33.74996 -31.56849 -30.30898 -28.32142 -26.59291 -25.79531 -24.87611 -23.42012 -21.32065 -20.68408 -20.07487 -18.95349 -18.47431 -17.79300 -17.00080 -16.82187 -16.63703 -16.05157 -15.98295 -15.68712 -15.49923 -15.26835 -15.03162 -14.53150 -14.42478 -14.02372 -13.99330 -13.66088 -13.47491 -13.33120 -13.25669 -13.13867 -13.05257 -12.43924 -12.33244 -11.84492 -11.78674 -11.44050 -11.16566 -11.09644 -10.45274 -10.13357 -9.70962 -9.27269 -4.85377 0.39757 1.39330 1.55021 1.59162 1.67510 1.82750 1.87755 2.04081 2.27004 2.32885 3.10066 3.55366 3.56216 3.70193 3.73919 3.84231 3.93510 3.99185 4.02790 4.23028 4.36192 4.39855 4.43782 4.68143 4.70732 4.73208 4.79022 4.79359 4.88970 4.94320 4.98411 5.12900 5.19155 5.20844 5.29541 5.60393 5.71439 5.88761 6.15729 6.46620 6.61798 6.69177 7.12300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.412 5.412 3 C 0.033 3.967 4 C -0.215 4.215 5 C -0.045 4.045 6 O -0.552 6.552 7 Si 0.765 3.235 8 C -0.112 4.112 9 C -0.079 4.079 10 C 0.588 3.412 11 O -0.582 6.582 12 N -0.691 5.691 13 C 0.108 3.892 14 H 0.089 0.911 15 C -0.116 4.116 16 C -0.102 4.102 17 H 0.094 0.906 18 C -0.014 4.014 19 C 0.232 3.768 20 N -0.519 5.519 21 C -0.153 4.153 22 H 0.081 0.919 23 H 0.086 0.914 24 H 0.113 0.887 25 H 0.197 0.803 26 H 0.119 0.881 27 H 0.384 0.616 28 H -0.308 1.308 29 H -0.279 1.279 30 H 0.158 0.842 31 H 0.414 0.586 32 H 0.127 0.873 33 H 0.089 0.911 34 H 0.138 0.862 35 H 0.144 0.856 36 H 0.049 0.951 37 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.373 0.188 -3.734 3.983 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.084 5.084 3 C -0.104 4.104 4 C -0.222 4.222 5 C -0.155 4.155 6 O -0.359 6.359 7 Si 0.671 3.329 8 C -0.138 4.138 9 C -0.192 4.192 10 C 0.377 3.623 11 O -0.464 6.464 12 N -0.342 5.342 13 C 0.003 3.997 14 H 0.107 0.893 15 C -0.154 4.154 16 C -0.121 4.121 17 H 0.112 0.888 18 C -0.053 4.053 19 C -0.084 4.084 20 N -0.197 5.197 21 C -0.192 4.192 22 H 0.100 0.900 23 H 0.105 0.895 24 H 0.131 0.869 25 H 0.214 0.786 26 H 0.137 0.863 27 H 0.233 0.767 28 H -0.237 1.237 29 H -0.205 1.205 30 H 0.175 0.825 31 H 0.251 0.749 32 H 0.145 0.855 33 H 0.108 0.892 34 H 0.156 0.844 35 H 0.162 0.838 36 H 0.068 0.932 37 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.674 0.494 -2.148 2.768 hybrid contribution 0.363 -0.123 -1.178 1.239 sum -1.310 0.371 -3.327 3.595 Atomic orbital electron populations 1.22435 0.74898 1.05995 1.04600 1.44028 1.07627 1.04839 1.51941 1.22318 0.89932 0.92500 1.05681 1.19819 0.94050 0.94744 1.13548 1.24477 0.93518 1.08435 0.89030 1.86556 1.42715 1.90294 1.16373 0.94323 0.79063 0.71832 0.87717 1.21427 0.94304 0.95160 1.02912 1.20110 0.90947 0.87655 1.20443 1.17172 0.85325 0.84261 0.75531 1.90776 1.17619 1.85309 1.52712 1.45279 1.11560 1.05046 1.72319 1.21986 0.99843 0.79530 0.98300 0.89259 1.23353 0.97243 0.99855 0.94971 1.22542 0.96543 0.95484 0.97576 0.88791 1.19720 1.05706 0.98708 0.81157 1.30277 0.91254 0.91056 0.95767 1.81446 1.12121 1.10922 1.15256 1.23644 0.97667 1.00876 0.96970 0.90035 0.89541 0.86885 0.78584 0.86349 0.76741 1.23677 1.20484 0.82456 0.74867 0.85518 0.89229 0.84449 0.83791 0.93216 0.87201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.64 127.77 1.36 1.26 16 2 N -0.41 -0.58 3.16 -534.31 -1.69 -2.27 16 3 C 0.03 -0.06 9.94 83.48 0.83 0.77 16 4 C -0.22 0.12 5.43 -20.12 -0.11 0.01 16 5 C -0.04 0.06 3.02 71.23 0.22 0.28 16 6 O -0.55 -1.08 12.88 -148.98 -1.92 -3.00 16 7 Si 0.77 -2.52 30.60 68.60 2.10 -0.42 16 8 C -0.11 -0.06 10.28 22.57 0.23 0.17 16 9 C -0.08 -0.26 6.88 40.35 0.28 0.02 16 10 C 0.59 2.81 7.77 86.44 0.67 3.48 16 11 O -0.58 -6.51 14.30 -4.32 -0.06 -6.57 16 12 N -0.69 1.49 5.24 -444.00 -2.32 -0.83 16 13 C 0.11 -0.51 4.29 45.52 0.20 -0.31 16 14 H 0.09 -0.06 7.53 -2.39 -0.02 -0.08 16 15 C -0.12 1.42 7.39 31.12 0.23 1.65 16 16 C -0.10 1.07 3.49 -10.27 -0.04 1.04 16 17 H 0.09 -0.87 8.12 -2.39 -0.02 -0.89 16 18 C -0.01 0.17 5.54 28.79 0.16 0.33 16 19 C 0.23 -0.08 15.43 89.41 1.38 1.30 16 20 N -0.52 -4.97 18.56 20.04 0.37 -4.60 16 21 C -0.15 0.90 7.43 31.12 0.23 1.13 16 22 H 0.08 -0.20 8.14 -2.39 -0.02 -0.21 16 23 H 0.09 0.25 6.22 -2.38 -0.01 0.24 16 24 H 0.11 -0.86 8.14 -2.38 -0.02 -0.88 16 25 H 0.20 -1.53 6.21 -2.91 -0.02 -1.55 16 26 H 0.12 -0.30 7.96 -2.39 -0.02 -0.32 16 27 H 0.38 -1.26 8.70 -74.06 -0.64 -1.91 16 28 H -0.31 -1.63 7.11 99.48 0.71 -0.92 16 29 H -0.28 0.08 7.11 99.48 0.71 0.79 16 30 H 0.16 -0.51 7.49 -2.91 -0.02 -0.53 16 31 H 0.41 -2.73 7.65 -92.71 -0.71 -3.44 16 32 H 0.13 -2.03 8.10 -2.38 -0.02 -2.04 16 33 H 0.09 -1.15 8.14 -2.39 -0.02 -1.17 16 34 H 0.14 -2.27 7.85 -2.39 -0.02 -2.28 16 35 H 0.14 -2.50 8.14 -2.39 -0.02 -2.52 16 36 H 0.05 -0.03 8.14 -2.38 -0.02 -0.05 16 37 H 0.11 -0.92 7.90 -2.39 -0.02 -0.93 16 Total: 0.00 -27.19 320.92 1.91 -25.28 By element: Atomic # 1 Polarization: -18.51 SS G_CDS: -0.20 Total: -18.71 kcal Atomic # 6 Polarization: 5.49 SS G_CDS: 5.64 Total: 11.13 kcal Atomic # 7 Polarization: -4.06 SS G_CDS: -3.64 Total: -7.70 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -1.98 Total: -9.57 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.10 Total: -0.42 kcal Total: -27.19 1.91 -25.28 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.135 kcal (2) G-P(sol) polarization free energy of solvation -27.190 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.907 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.282 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds