Wall clock time and date at job start Sun Mar 7 2021 06:06:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13608 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.53005 * 109.46625 * 187.79278 * 3 2 1 5 5 H 1.08994 * 112.90631 * 43.75380 * 4 3 2 6 6 C 1.53779 * 113.61506 * 272.49693 * 4 3 2 7 7 C 1.53788 * 87.07869 * 220.02219 * 6 4 3 8 8 H 1.08991 * 113.68895 * 139.99773 * 7 6 4 9 9 N 1.46497 * 113.61426 * 270.88481 * 7 6 4 10 10 C 1.34775 * 120.00357 * 252.49985 * 9 7 6 11 11 O 1.21576 * 119.99557 * 359.97438 * 10 9 7 12 12 C 1.47687 * 120.00349 * 179.97438 * 10 9 7 13 13 C 1.39621 * 120.16954 * 0.02562 * 12 10 9 14 14 C 1.37895 * 119.88113 * 179.97438 * 13 12 10 15 15 C 1.50701 * 119.88983 * 180.02562 * 14 13 12 16 16 O 1.42900 * 109.47286 * 300.00436 * 15 14 13 17 17 Si 1.86300 * 109.47135 * 179.97438 * 15 14 13 18 18 C 1.38421 * 120.21790 * 0.02562 * 14 13 12 19 19 C 1.38245 * 120.33762 * 359.97438 * 18 14 13 20 20 C 1.38272 * 120.11795 * 0.02562 * 19 18 14 21 21 F 1.35106 * 120.10826 * 179.97438 * 20 19 18 22 22 C 1.53776 * 87.08316 * 25.43397 * 7 6 4 23 23 H 1.09004 * 109.47060 * 67.80043 * 3 2 1 24 24 H 1.08996 * 109.47066 * 307.79625 * 3 2 1 25 25 H 1.09000 * 113.61207 * 105.47821 * 6 4 3 26 26 H 1.08995 * 113.61344 * 334.56825 * 6 4 3 27 27 H 0.97006 * 119.99898 * 72.49484 * 9 7 6 28 28 H 1.08005 * 120.05513 * 0.25091 * 13 12 10 29 29 H 1.09000 * 109.46832 * 60.00366 * 15 14 13 30 30 H 0.96702 * 113.99549 * 299.99921 * 16 15 14 31 31 H 1.48497 * 109.99970 * 180.02562 * 17 15 14 32 32 H 1.48500 * 109.99968 * 301.32200 * 17 15 14 33 33 H 1.07994 * 119.82803 * 179.97438 * 18 14 13 34 34 H 1.07998 * 119.93343 * 180.02562 * 19 18 14 35 35 H 1.09000 * 113.61605 * 89.11379 * 22 7 6 36 36 H 1.08997 * 113.61987 * 220.02131 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 6 3.1173 1.4302 0.1956 5 1 2.5747 1.9715 0.9705 6 6 3.2644 2.2168 -1.1175 7 6 4.5655 2.7934 -0.5346 8 1 5.3724 2.8764 -1.2626 9 7 4.3682 4.0220 0.2385 10 6 4.7680 5.2066 -0.2648 11 8 5.2927 5.2555 -1.3604 12 6 4.5686 6.4452 0.5144 13 6 3.9669 6.3931 1.7732 14 6 3.7841 7.5532 2.4958 15 6 3.1351 7.4971 3.8548 16 8 1.8190 6.9541 3.7321 17 14 3.0347 9.2159 4.5664 18 6 4.1948 8.7691 1.9771 19 6 4.7916 8.8311 0.7317 20 6 4.9817 7.6765 -0.0049 21 9 5.5645 7.7374 -1.2223 22 6 4.6461 1.5261 0.3326 23 1 2.9716 -0.3875 -0.9515 24 1 2.9717 -0.6290 0.8120 25 1 2.4850 2.9637 -1.2687 26 1 3.4203 1.5834 -1.9908 27 1 3.9498 3.9829 1.1128 28 1 3.6491 5.4453 2.1820 29 1 3.7289 6.8651 4.5151 30 1 1.2341 7.4667 3.1575 31 1 2.3971 9.1742 5.9069 32 1 4.3947 9.8033 4.6694 33 1 4.0482 9.6738 2.5483 34 1 5.1099 9.7832 0.3334 35 1 5.1796 0.7039 -0.1443 36 1 4.9820 1.7152 1.3521 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_12335834.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:06:37 Heat of formation + Delta-G solvation = -28.318050 kcal Electronic energy + Delta-G solvation = -22444.624883 eV Core-core repulsion = 18810.947560 eV Total energy + Delta-G solvation = -3633.677323 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.106 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -49.88564 -41.67274 -40.62999 -39.38597 -37.63165 -37.39319 -34.85458 -32.84411 -32.39524 -31.04358 -26.91531 -26.78142 -25.90986 -24.50955 -23.14143 -21.75923 -20.48960 -19.37678 -18.73857 -18.38541 -18.28128 -17.41446 -16.96715 -16.83404 -16.43851 -16.20656 -16.12649 -15.92325 -15.72702 -15.50694 -15.05692 -14.69747 -14.40626 -14.37309 -14.04244 -13.81471 -13.71474 -13.63426 -13.29751 -13.17923 -12.92433 -12.57559 -12.30463 -12.15809 -11.97813 -11.68324 -11.38295 -11.10617 -10.64580 -10.46815 -10.16663 -9.87691 -5.20193 -0.56102 -0.14760 1.09042 1.45836 1.60715 1.79736 1.82294 1.84742 1.88789 2.42792 2.88042 2.97524 3.17884 3.25435 3.32179 3.38788 3.41785 3.48715 3.66033 3.68512 3.83397 3.95924 4.06742 4.24160 4.31586 4.39256 4.42441 4.54035 4.55851 4.60997 4.65084 4.75995 4.81321 4.87060 4.88512 4.97455 5.00121 5.43184 5.49592 6.30299 6.36100 6.62002 7.07241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.111 4.111 5 H 0.097 0.903 6 C -0.150 4.150 7 C 0.119 3.881 8 H 0.109 0.891 9 N -0.709 5.709 10 C 0.562 3.438 11 O -0.517 6.517 12 C -0.175 4.175 13 C -0.031 4.031 14 C -0.140 4.140 15 C -0.067 4.067 16 O -0.538 6.538 17 Si 0.688 3.312 18 C -0.060 4.060 19 C -0.156 4.156 20 C 0.167 3.833 21 F -0.110 7.110 22 C -0.136 4.136 23 H 0.112 0.888 24 H 0.113 0.887 25 H 0.074 0.926 26 H 0.099 0.901 27 H 0.401 0.599 28 H 0.139 0.861 29 H 0.118 0.882 30 H 0.381 0.619 31 H -0.252 1.252 32 H -0.255 1.255 33 H 0.142 0.858 34 H 0.150 0.850 35 H 0.105 0.895 36 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.737 1.198 3.205 3.837 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.131 4.131 5 H 0.116 0.884 6 C -0.188 4.188 7 C 0.014 3.986 8 H 0.127 0.873 9 N -0.361 5.361 10 C 0.349 3.651 11 O -0.393 6.393 12 C -0.179 4.179 13 C -0.050 4.050 14 C -0.141 4.141 15 C -0.178 4.178 16 O -0.344 6.344 17 Si 0.589 3.411 18 C -0.078 4.078 19 C -0.175 4.175 20 C 0.147 3.853 21 F -0.088 7.088 22 C -0.175 4.175 23 H 0.130 0.870 24 H 0.131 0.869 25 H 0.093 0.907 26 H 0.117 0.883 27 H 0.237 0.763 28 H 0.156 0.844 29 H 0.136 0.864 30 H 0.229 0.771 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.159 0.841 34 H 0.168 0.832 35 H 0.123 0.877 36 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.927 1.304 3.411 3.768 hybrid contribution 0.606 -0.545 0.165 0.831 sum 1.532 0.759 3.575 3.963 Atomic orbital electron populations 1.81296 1.13141 1.08096 1.08563 1.29218 0.95341 0.93566 0.93470 1.19337 0.81701 0.98772 1.05879 1.22640 0.96696 0.94245 0.99483 0.88434 1.23595 0.98261 0.99838 0.97140 1.21840 0.99005 0.83000 0.94759 0.87255 1.45536 1.62751 1.05953 1.21879 1.17958 0.78370 0.83090 0.85672 1.90880 1.42005 1.86404 1.19987 1.20050 1.07426 0.93101 0.97356 1.21012 0.93591 0.98976 0.91401 1.20338 1.02380 0.93240 0.98152 1.25044 0.85560 1.11262 0.95886 1.86519 1.20867 1.55198 1.71815 0.94725 0.84623 0.78077 0.83648 1.21109 0.94902 0.97336 0.94421 1.21177 1.02809 0.98095 0.95417 1.17749 0.93218 0.92981 0.81377 1.91636 1.80384 1.96925 1.39888 1.23391 0.95073 0.97661 1.01329 0.86997 0.86913 0.90725 0.88258 0.76322 0.84361 0.86433 0.77105 1.17622 1.17968 0.84094 0.83199 0.87655 0.90169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.81 18.54 42.16 0.78 -1.03 16 2 C 0.20 0.00 15.42 -20.76 -0.32 -0.32 16 3 C -0.02 0.08 5.54 -29.52 -0.16 -0.08 16 4 C -0.11 0.50 3.49 -89.80 -0.31 0.19 16 5 H 0.10 -0.42 8.12 -51.93 -0.42 -0.84 16 6 C -0.15 0.42 7.43 -25.92 -0.19 0.22 16 7 C 0.12 -0.25 4.32 -67.12 -0.29 -0.54 16 8 H 0.11 -0.04 7.46 -51.93 -0.39 -0.42 16 9 N -0.71 0.99 5.21 -54.01 -0.28 0.71 16 10 C 0.56 1.18 7.77 -12.40 -0.10 1.08 16 11 O -0.52 -3.21 14.94 5.30 0.08 -3.13 16 12 C -0.18 -0.12 5.88 -104.91 -0.62 -0.74 16 13 C -0.03 0.06 9.09 -39.19 -0.36 -0.30 16 14 C -0.14 0.34 5.39 -104.68 -0.56 -0.22 16 15 C -0.07 0.19 2.82 36.01 0.10 0.29 16 16 O -0.54 1.25 12.76 -35.23 -0.45 0.80 16 17 Si 0.69 -2.19 29.78 -169.99 -5.06 -7.26 16 18 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 19 C -0.16 0.21 10.01 -39.57 -0.40 -0.19 16 20 C 0.17 0.25 7.29 -38.96 -0.28 -0.03 16 21 F -0.11 -0.48 15.55 2.25 0.04 -0.44 16 22 C -0.14 0.69 7.39 -25.92 -0.19 0.49 16 23 H 0.11 -0.73 7.84 -51.93 -0.41 -1.14 16 24 H 0.11 -0.76 8.14 -51.93 -0.42 -1.19 16 25 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.10 -0.36 7.90 -51.93 -0.41 -0.77 16 27 H 0.40 -1.53 6.73 -40.82 -0.27 -1.81 16 28 H 0.14 -0.52 6.40 -52.48 -0.34 -0.85 16 29 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 30 H 0.38 -2.22 8.70 45.56 0.40 -1.83 16 31 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 32 H -0.25 0.25 7.11 56.52 0.40 0.66 16 33 H 0.14 -0.69 4.86 -52.49 -0.25 -0.95 16 34 H 0.15 -0.48 8.06 -52.49 -0.42 -0.90 16 35 H 0.11 -0.66 8.10 -51.93 -0.42 -1.08 16 36 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 LS Contribution 318.05 15.07 4.79 4.79 Total: 0.00 -10.83 318.05 -7.95 -18.78 By element: Atomic # 1 Polarization: -9.09 SS G_CDS: -3.82 Total: -12.91 kcal Atomic # 6 Polarization: 3.71 SS G_CDS: -4.03 Total: -0.31 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: 0.50 Total: -0.32 kcal Atomic # 8 Polarization: -1.96 SS G_CDS: -0.37 Total: -2.33 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -2.19 SS G_CDS: -5.06 Total: -7.26 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -10.83 -7.95 -18.78 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_12335834.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.537 kcal (2) G-P(sol) polarization free energy of solvation -10.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds