Wall clock time and date at job start Sun Mar 7 2021 06:06:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.34853 * 125.89486 * 2 1 4 4 C 1.40943 * 107.46518 * 179.97438 * 3 2 1 5 5 C 1.50697 * 126.26632 * 180.02562 * 4 3 2 6 6 O 1.42900 * 109.47590 * 254.98025 * 5 4 3 7 7 Si 1.86305 * 109.47027 * 14.98216 * 5 4 3 8 8 C 1.34848 * 107.46445 * 359.76170 * 4 3 2 9 9 C 1.50705 * 125.89714 * 180.26553 * 8 4 3 10 10 N 1.36561 * 125.90260 * 179.97438 * 2 1 3 11 11 C 1.40220 * 125.66675 * 0.02562 * 10 2 1 12 12 C 1.38550 * 119.99617 * 294.74784 * 11 10 2 13 13 C 1.39503 * 119.78779 * 180.28211 * 12 11 10 14 14 C 1.47862 * 120.11489 * 180.02562 * 13 12 11 15 15 O 1.21546 * 119.99722 * 359.97335 * 14 13 12 16 16 N 1.34778 * 119.99747 * 179.97438 * 14 13 12 17 17 C 1.46495 * 119.99614 * 179.97438 * 16 14 13 18 18 H 1.09008 * 112.84900 * 23.81246 * 17 16 14 19 19 C 1.53782 * 113.61330 * 155.00226 * 17 16 14 20 20 C 1.53778 * 87.07992 * 89.12073 * 19 17 16 21 21 H 1.09010 * 113.61417 * 270.88577 * 20 19 17 22 22 C 1.53000 * 113.61832 * 140.06798 * 20 19 17 23 23 C 1.47195 * 109.47274 * 174.99857 * 22 20 19 24 24 N 9.14992 * 157.77518 * 179.97438 * 12 1 2 25 25 C 1.53773 * 113.61825 * 252.50227 * 17 16 14 26 26 C 1.39575 * 119.77070 * 359.97438 * 13 12 11 27 27 C 1.38020 * 119.98875 * 0.02562 * 26 13 12 28 28 C 1.38216 * 120.21576 * 359.97438 * 27 26 13 29 29 H 1.08994 * 109.47129 * 270.03746 * 1 2 3 30 30 H 1.08998 * 109.47420 * 30.04043 * 1 2 3 31 31 H 1.09002 * 109.46610 * 150.03701 * 1 2 3 32 32 H 1.07999 * 126.26896 * 359.94684 * 3 2 1 33 33 H 1.09004 * 109.47436 * 134.97728 * 5 4 3 34 34 H 0.96699 * 114.00071 * 179.97438 * 6 5 4 35 35 H 1.48506 * 109.99842 * 178.68018 * 7 5 4 36 36 H 1.48501 * 110.00069 * 299.99585 * 7 5 4 37 37 H 1.09000 * 109.46871 * 270.14320 * 9 8 4 38 38 H 1.08998 * 109.47009 * 30.14004 * 9 8 4 39 39 H 1.09001 * 109.47218 * 150.14433 * 9 8 4 40 40 H 1.07999 * 120.10736 * 0.25889 * 12 11 10 41 41 H 0.96994 * 119.99820 * 0.02562 * 16 14 13 42 42 H 1.09003 * 113.61679 * 203.66467 * 19 17 16 43 43 H 1.08996 * 113.61491 * 334.56944 * 19 17 16 44 44 H 1.09002 * 109.46741 * 294.99816 * 22 20 19 45 45 H 1.08999 * 109.47075 * 54.99531 * 22 20 19 46 46 H 1.09000 * 113.61414 * 25.43285 * 25 17 16 47 47 H 1.09004 * 113.61963 * 156.33942 * 25 17 16 48 48 H 1.08005 * 120.00428 * 180.02562 * 26 13 12 49 49 H 1.08005 * 119.89342 * 180.02562 * 27 26 13 50 50 H 1.08003 * 119.88896 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6469 0.0006 5 6 4.8647 1.5178 0.0014 6 8 5.4559 1.5084 -1.2996 7 14 4.3906 3.2613 0.4555 8 6 3.6121 -0.7014 0.0063 9 6 4.8179 -1.6055 0.0146 10 7 2.3078 -1.1062 0.0005 11 6 1.8645 -2.4364 0.0006 12 6 1.1686 -2.9346 1.0901 13 6 0.7347 -4.2604 1.0881 14 6 -0.0091 -4.7993 2.2468 15 8 -0.2430 -4.0870 3.2035 16 7 -0.4276 -6.0805 2.2422 17 6 -1.1641 -6.6146 3.3904 18 1 -1.6635 -5.8388 3.9710 19 6 -2.0742 -7.8035 3.0396 20 6 -0.8660 -8.7111 3.3247 21 1 -0.2364 -8.8869 2.4523 22 6 -1.2288 -10.0001 4.0650 23 6 -0.0334 -10.8507 4.1838 24 7 0.8884 -11.5072 4.2764 25 6 -0.3448 -7.5953 4.2457 26 6 1.0042 -5.0761 -0.0119 27 6 1.6982 -4.5702 -1.0924 28 6 2.1279 -3.2565 -1.0898 29 1 -0.3633 0.0007 1.0276 30 1 -0.3634 0.8896 -0.5144 31 1 -0.3632 -0.8904 -0.5133 32 1 1.9669 2.1205 -0.0008 33 1 5.5807 1.1349 0.7286 34 1 6.2538 2.0497 -1.3728 35 1 5.5993 4.1234 0.4909 36 1 3.4148 3.7950 -0.5285 37 1 5.1138 -1.8257 -1.0111 38 1 5.6398 -1.1101 0.5315 39 1 4.5720 -2.5343 0.5293 40 1 0.9630 -2.2986 1.9385 41 1 -0.2406 -6.6490 1.4789 42 1 -2.8993 -7.9428 3.7381 43 1 -2.3936 -7.8162 1.9976 44 1 -1.6008 -9.7552 5.0598 45 1 -2.0004 -10.5331 3.5095 46 1 0.7320 -7.4401 4.1773 47 1 -0.6971 -7.6778 5.2739 48 1 0.6697 -6.1030 -0.0177 49 1 1.9055 -5.2027 -1.9429 50 1 2.6702 -2.8660 -1.9383 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_12335854.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:06:49 Heat of formation + Delta-G solvation = 65.049271 kcal Electronic energy + Delta-G solvation = -31836.653934 eV Core-core repulsion = 27604.224489 eV Total energy + Delta-G solvation = -4232.429445 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.173 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.80809 -41.68190 -40.37699 -39.10578 -37.66394 -37.46404 -35.06952 -34.18573 -33.65406 -32.48299 -31.32919 -30.35347 -30.09713 -27.16697 -26.96356 -25.84984 -24.73224 -24.09643 -23.64342 -22.10104 -20.99586 -20.55070 -20.09503 -18.88565 -18.49276 -18.31558 -17.61643 -17.37047 -17.20400 -16.72638 -16.30258 -16.24420 -15.81741 -15.70066 -15.61811 -15.29712 -15.04776 -14.97678 -14.73020 -14.57734 -14.11804 -14.09157 -14.07367 -13.93378 -13.68496 -13.65301 -13.60266 -13.46803 -13.27367 -13.23375 -13.15435 -12.98132 -12.62402 -12.51949 -12.39216 -12.25846 -12.20845 -11.73639 -11.70503 -11.43418 -11.13883 -10.45791 -10.36916 -10.20896 -10.17123 -9.44049 -8.69754 -4.76401 -0.50758 -0.11255 1.19557 1.50670 1.62272 1.67715 1.75926 1.79290 1.80793 1.90266 1.97095 2.16996 2.51809 2.83584 3.20301 3.36244 3.37113 3.55044 3.60715 3.62268 3.65120 3.66336 3.79865 3.85231 4.01710 4.05968 4.09766 4.20665 4.27728 4.33157 4.35741 4.38467 4.43759 4.49535 4.51349 4.57802 4.60712 4.64739 4.70142 4.73258 4.78414 4.80950 4.83347 4.88861 4.93075 4.98916 5.01666 5.04551 5.05816 5.28846 5.35524 5.43553 5.48444 6.09142 6.26070 6.26524 6.54451 6.57711 6.65659 7.01618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.027 3.973 3 C -0.182 4.182 4 C -0.148 4.148 5 C -0.038 4.038 6 O -0.538 6.538 7 Si 0.692 3.308 8 C 0.052 3.948 9 C -0.083 4.083 10 N -0.403 5.403 11 C 0.114 3.886 12 C -0.049 4.049 13 C -0.124 4.124 14 C 0.564 3.436 15 O -0.525 6.525 16 N -0.709 5.709 17 C 0.119 3.881 18 H 0.110 0.890 19 C -0.136 4.136 20 C -0.111 4.111 21 H 0.097 0.903 22 C -0.017 4.017 23 C 0.202 3.798 24 N -0.434 5.434 25 C -0.150 4.150 26 C -0.079 4.079 27 C -0.111 4.111 28 C -0.082 4.082 29 H 0.075 0.925 30 H 0.082 0.918 31 H 0.062 0.938 32 H 0.143 0.857 33 H 0.066 0.934 34 H 0.374 0.626 35 H -0.267 1.267 36 H -0.257 1.257 37 H 0.073 0.927 38 H 0.081 0.919 39 H 0.061 0.939 40 H 0.145 0.855 41 H 0.401 0.599 42 H 0.105 0.895 43 H 0.080 0.920 44 H 0.112 0.888 45 H 0.113 0.887 46 H 0.074 0.926 47 H 0.099 0.901 48 H 0.133 0.867 49 H 0.141 0.859 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.295 -2.198 -0.806 4.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.081 4.081 3 C -0.205 4.205 4 C -0.154 4.154 5 C -0.149 4.149 6 O -0.345 6.345 7 Si 0.593 3.407 8 C -0.057 4.057 9 C -0.140 4.140 10 N -0.079 5.079 11 C 0.024 3.976 12 C -0.069 4.069 13 C -0.128 4.128 14 C 0.351 3.649 15 O -0.402 6.402 16 N -0.361 5.361 17 C 0.013 3.987 18 H 0.128 0.872 19 C -0.174 4.174 20 C -0.131 4.131 21 H 0.115 0.885 22 C -0.057 4.057 23 C -0.116 4.116 24 N -0.111 5.111 25 C -0.189 4.189 26 C -0.098 4.098 27 C -0.130 4.130 28 C -0.102 4.102 29 H 0.093 0.907 30 H 0.101 0.899 31 H 0.081 0.919 32 H 0.161 0.839 33 H 0.083 0.917 34 H 0.221 0.779 35 H -0.192 1.192 36 H -0.181 1.181 37 H 0.092 0.908 38 H 0.100 0.900 39 H 0.080 0.920 40 H 0.163 0.837 41 H 0.237 0.763 42 H 0.124 0.876 43 H 0.099 0.901 44 H 0.130 0.870 45 H 0.131 0.869 46 H 0.093 0.907 47 H 0.118 0.882 48 H 0.151 0.849 49 H 0.159 0.841 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -3.725 -2.527 -0.327 4.513 hybrid contribution 0.768 -0.221 -1.298 1.524 sum -2.958 -2.748 -1.625 4.352 Atomic orbital electron populations 1.20349 0.87766 1.03267 1.02971 1.20375 0.93493 0.84709 1.09482 1.20580 0.91767 0.97743 1.10442 1.18448 0.93209 0.91612 1.12133 1.24021 0.94472 1.09377 0.87015 1.86632 1.45445 1.71742 1.30689 0.94799 0.81783 0.74206 0.89868 1.20202 0.83804 0.93918 1.07792 1.20312 0.93443 0.97502 1.02779 1.41333 1.05634 1.02718 1.58213 1.17524 1.01124 0.83876 0.95070 1.21295 0.94318 0.94386 0.96866 1.19746 1.02907 0.94585 0.95544 1.18134 0.78665 0.81658 0.86405 1.90822 1.55945 1.58135 1.35271 1.45552 1.57690 1.11944 1.20913 1.21850 0.93255 0.95800 0.87754 0.87217 1.23391 0.96802 0.93772 1.03473 1.22638 0.98824 0.92199 0.99412 0.88501 1.19340 0.89797 0.92672 1.03930 1.29195 0.94915 0.93935 0.93549 1.81275 1.11428 1.10003 1.08399 1.23597 1.01323 0.94782 0.99168 1.21419 0.96393 0.99458 0.92503 1.21056 0.98082 0.94900 0.98927 1.21487 0.98028 0.93852 0.96787 0.90653 0.89900 0.91911 0.83902 0.91651 0.77927 1.19233 1.18099 0.90840 0.90040 0.91963 0.83737 0.76321 0.87634 0.90130 0.86974 0.86879 0.90747 0.88233 0.84939 0.84115 0.84660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.03 9.94 36.01 0.36 0.33 16 2 C 0.03 0.07 6.81 -81.69 -0.56 -0.48 16 3 C -0.18 -0.56 9.27 -39.76 -0.37 -0.93 16 4 C -0.15 -0.50 5.39 -104.80 -0.56 -1.06 16 5 C -0.04 -0.07 2.60 36.00 0.09 0.03 16 6 O -0.54 -1.43 12.86 -35.23 -0.45 -1.88 16 7 Si 0.69 0.59 30.84 -169.99 -5.24 -4.65 16 8 C 0.05 0.15 6.81 -81.69 -0.56 -0.40 16 9 C -0.08 -0.07 9.73 36.01 0.35 0.28 16 10 N -0.40 -1.03 2.79 -52.61 -0.15 -1.18 16 11 C 0.11 0.12 4.65 -83.64 -0.39 -0.27 16 12 C -0.05 -0.06 9.28 -39.00 -0.36 -0.42 16 13 C -0.12 0.03 5.87 -104.99 -0.62 -0.58 16 14 C 0.56 0.42 7.77 -12.32 -0.10 0.32 16 15 O -0.53 -2.43 15.94 5.33 0.08 -2.34 16 16 N -0.71 1.83 5.21 -53.96 -0.28 1.55 16 17 C 0.12 -0.37 4.32 -67.12 -0.29 -0.66 16 18 H 0.11 -0.15 7.46 -51.92 -0.39 -0.53 16 19 C -0.14 0.80 7.39 -25.92 -0.19 0.61 16 20 C -0.11 0.60 3.49 -89.81 -0.31 0.28 16 21 H 0.10 -0.51 8.12 -51.92 -0.42 -0.93 16 22 C -0.02 0.10 5.54 -29.52 -0.16 -0.07 16 23 C 0.20 -0.11 15.41 -20.78 -0.32 -0.43 16 24 N -0.43 -1.60 18.53 42.13 0.78 -0.82 16 25 C -0.15 0.54 7.43 -25.92 -0.19 0.34 16 26 C -0.08 0.22 9.54 -39.16 -0.37 -0.16 16 27 C -0.11 0.28 10.02 -39.67 -0.40 -0.11 16 28 C -0.08 0.05 9.73 -39.32 -0.38 -0.33 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 0.02 7.83 -51.93 -0.41 -0.39 16 32 H 0.14 0.27 6.55 -52.49 -0.34 -0.07 16 33 H 0.07 0.01 7.49 -51.93 -0.39 -0.38 16 34 H 0.37 -0.52 8.74 45.56 0.40 -0.12 16 35 H -0.27 -0.68 7.11 56.52 0.40 -0.28 16 36 H -0.26 -1.01 7.06 56.52 0.40 -0.61 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.08 0.01 7.50 -51.93 -0.39 -0.37 16 39 H 0.06 0.03 7.83 -51.93 -0.41 -0.38 16 40 H 0.14 0.34 7.65 -52.49 -0.40 -0.06 16 41 H 0.40 -2.07 6.73 -40.82 -0.27 -2.34 16 42 H 0.11 -0.74 8.10 -51.93 -0.42 -1.16 16 43 H 0.08 -0.50 8.14 -51.93 -0.42 -0.92 16 44 H 0.11 -0.80 7.85 -51.93 -0.41 -1.20 16 45 H 0.11 -0.84 8.14 -51.93 -0.42 -1.26 16 46 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 47 H 0.10 -0.43 7.90 -51.93 -0.41 -0.84 16 48 H 0.13 -0.77 6.40 -52.48 -0.34 -1.10 16 49 H 0.14 -0.67 8.06 -52.48 -0.42 -1.10 16 50 H 0.14 -0.11 8.06 -52.48 -0.42 -0.54 16 LS Contribution 422.46 15.07 6.37 6.37 Total: 0.00 -11.71 422.46 -11.40 -23.11 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -7.18 Total: -16.44 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -5.33 Total: -3.72 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: 0.35 Total: -0.45 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.37 Total: -4.22 kcal Atomic # 14 Polarization: 0.59 SS G_CDS: -5.24 Total: -4.65 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -11.71 -11.40 -23.11 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_12335854.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.158 kcal (2) G-P(sol) polarization free energy of solvation -11.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds