Wall clock time and date at job start Sun Mar 7 2021 06:07:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35656 * 117.00128 * 2 1 4 4 C 1.40138 * 120.14872 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19220 * 0.02562 * 4 3 2 6 6 O 1.21589 * 119.99944 * 359.97438 * 5 4 3 7 7 N 1.34776 * 119.99871 * 180.02562 * 5 4 3 8 8 C 1.46503 * 119.99784 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.85279 * 23.80346 * 8 7 5 10 10 C 1.53787 * 113.61181 * 154.99519 * 8 7 5 11 11 C 1.53784 * 87.07923 * 89.11654 * 10 8 7 12 12 H 1.09000 * 113.61578 * 270.88484 * 11 10 8 13 13 C 1.52997 * 113.61330 * 139.97966 * 11 10 8 14 14 C 1.47203 * 109.46999 * 174.99846 * 13 11 10 15 15 N 9.61490 * 158.43778 * 93.48671 * 2 1 3 16 16 C 1.53778 * 113.61472 * 252.49040 * 8 7 5 17 17 C 1.39709 * 119.61694 * 180.27760 * 4 3 2 18 18 C 1.37795 * 119.90292 * 359.51286 * 17 4 3 19 19 C 1.50698 * 119.84411 * 180.21295 * 18 17 4 20 20 O 1.42897 * 109.47414 * 300.27518 * 19 18 17 21 21 Si 1.86305 * 109.46750 * 180.28017 * 19 18 17 22 22 C 1.38542 * 120.30320 * 0.48681 * 18 17 4 23 23 C 1.38063 * 120.38935 * 359.75010 * 22 18 17 24 24 H 1.08998 * 109.46929 * 59.99507 * 1 2 3 25 25 H 1.08992 * 109.47398 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.47074 * 299.99933 * 1 2 3 27 27 H 0.96997 * 120.00437 * 359.97438 * 7 5 4 28 28 H 1.09004 * 113.61202 * 203.66406 * 10 8 7 29 29 H 1.08994 * 113.61447 * 334.56838 * 10 8 7 30 30 H 1.09004 * 109.47170 * 294.99762 * 13 11 10 31 31 H 1.08995 * 109.47328 * 55.00254 * 13 11 10 32 32 H 1.08999 * 113.61111 * 25.43782 * 16 8 7 33 33 H 1.08999 * 113.61280 * 156.25165 * 16 8 7 34 34 H 1.07999 * 120.04678 * 179.72699 * 17 4 3 35 35 H 1.08997 * 109.47707 * 60.28027 * 19 18 17 36 36 H 0.96707 * 114.00177 * 300.01008 * 20 19 18 37 37 H 1.48500 * 109.99849 * 179.97438 * 21 19 18 38 38 H 1.48500 * 109.99912 * 301.31652 * 21 19 18 39 39 H 1.07996 * 119.80751 * 179.71488 * 22 18 17 40 40 H 1.07999 * 119.95561 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2856 -0.0005 5 6 4.2550 0.0531 -0.0017 6 8 3.7094 -1.0335 -0.0017 7 7 5.6005 0.1316 -0.0017 8 6 6.4056 -1.0923 -0.0022 9 1 5.8705 -1.9508 -0.4080 10 6 7.8110 -0.9048 -0.5978 11 6 8.2770 -0.5354 0.8204 12 1 8.1895 0.5275 1.0458 13 6 9.6472 -1.1106 1.1846 14 6 10.0558 -0.6058 2.5056 15 7 10.3710 -0.2149 3.5270 16 6 7.0984 -1.3746 1.3413 17 6 4.0669 2.5363 0.0053 18 6 3.3038 3.6836 0.0015 19 6 3.9769 5.0319 0.0030 20 8 4.7929 5.1557 1.1695 21 14 2.6827 6.3720 0.0055 22 6 1.9207 3.6033 0.0019 23 6 1.2925 2.3739 0.0011 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 6.0357 0.9985 -0.0013 28 1 8.2517 -1.8274 -0.9758 29 1 7.8779 -0.0806 -1.3079 30 1 9.5884 -2.1986 1.2137 31 1 10.3795 -0.8061 0.4369 32 1 6.5899 -0.9296 2.1966 33 1 7.3429 -2.4257 1.4941 34 1 5.1448 2.6036 0.0094 35 1 4.5985 5.1288 -0.8871 36 1 4.3048 5.0794 2.0009 37 1 3.3336 7.7067 0.0076 38 1 1.8075 6.2351 -1.1864 39 1 1.3305 4.5077 0.0036 40 1 0.2139 2.3195 0.0019 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_12496546.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:11 Heat of formation + Delta-G solvation = -18.227774 kcal Electronic energy + Delta-G solvation = -24291.376612 eV Core-core repulsion = 20653.371001 eV Total energy + Delta-G solvation = -3638.005611 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.130 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.85826 -40.94334 -39.27279 -39.18259 -37.31885 -37.18278 -34.63860 -32.73912 -31.89805 -30.98386 -28.62324 -26.83806 -26.24254 -25.68085 -24.24494 -22.70021 -21.58031 -20.38138 -19.52599 -18.76383 -18.36730 -18.08139 -17.24499 -16.89568 -16.77586 -16.32894 -16.12713 -16.09496 -15.93006 -15.78426 -15.42421 -15.00354 -14.60725 -14.57717 -14.29463 -13.98711 -13.79990 -13.65285 -13.56554 -13.41910 -13.20717 -13.12568 -12.51080 -12.46552 -12.16904 -12.13097 -12.08482 -11.85179 -11.59735 -11.30280 -10.87551 -10.47072 -10.26682 -9.99822 -9.30492 -5.13368 -0.28505 0.16172 1.19542 1.52906 1.82290 1.83845 1.87394 1.89173 2.08344 2.19319 2.69216 2.92957 3.32609 3.34209 3.46567 3.48859 3.56430 3.62983 3.74145 3.76367 3.92718 4.03693 4.12705 4.17023 4.17894 4.31115 4.38183 4.44168 4.46855 4.54808 4.60372 4.61652 4.62639 4.78326 4.85450 4.94778 4.96212 5.02960 5.09179 5.20116 5.46210 5.58499 6.25608 6.47254 6.52482 6.65821 7.31860 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.513 6.513 7 N -0.715 5.715 8 C 0.122 3.878 9 H 0.108 0.892 10 C -0.137 4.137 11 C -0.111 4.111 12 H 0.097 0.903 13 C -0.017 4.017 14 C 0.202 3.798 15 N -0.435 5.435 16 C -0.150 4.150 17 C -0.020 4.020 18 C -0.169 4.169 19 C -0.062 4.062 20 O -0.541 6.541 21 Si 0.685 3.315 22 C -0.047 4.047 23 C -0.214 4.214 24 H 0.058 0.942 25 H 0.105 0.895 26 H 0.059 0.941 27 H 0.399 0.601 28 H 0.104 0.896 29 H 0.079 0.921 30 H 0.112 0.888 31 H 0.112 0.888 32 H 0.073 0.927 33 H 0.097 0.903 34 H 0.135 0.865 35 H 0.115 0.885 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.134 0.866 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.893 1.154 -2.782 4.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.352 3.648 6 O -0.388 6.388 7 N -0.368 5.368 8 C 0.016 3.984 9 H 0.126 0.874 10 C -0.175 4.175 11 C -0.130 4.130 12 H 0.115 0.885 13 C -0.057 4.057 14 C -0.116 4.116 15 N -0.112 5.112 16 C -0.189 4.189 17 C -0.038 4.038 18 C -0.169 4.169 19 C -0.173 4.173 20 O -0.346 6.346 21 Si 0.587 3.413 22 C -0.065 4.065 23 C -0.232 4.232 24 H 0.077 0.923 25 H 0.124 0.876 26 H 0.078 0.922 27 H 0.235 0.765 28 H 0.122 0.878 29 H 0.098 0.902 30 H 0.130 0.870 31 H 0.130 0.870 32 H 0.092 0.908 33 H 0.116 0.884 34 H 0.153 0.847 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.178 1.178 38 H -0.182 1.182 39 H 0.151 0.849 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.618 1.489 -2.125 3.686 hybrid contribution 0.203 0.124 -0.686 0.726 sum -2.416 1.613 -2.811 4.042 Atomic orbital electron populations 1.23239 0.78150 1.04790 1.01462 1.86381 1.21230 1.25175 1.86159 1.19088 0.90935 0.85073 0.90473 1.19316 0.90890 0.93845 1.13854 1.17932 0.81763 0.88678 0.76402 1.90849 1.71432 1.28575 1.47968 1.45573 1.05759 1.09098 1.76321 1.21780 0.91131 0.88569 0.96894 0.87412 1.23393 0.94875 1.03492 0.95777 1.22632 0.92402 1.00696 0.97311 0.88453 1.19341 0.97848 1.01937 0.86529 1.29320 0.93472 0.93770 0.95018 1.81381 1.08762 1.08980 1.12087 1.23590 0.96124 1.01021 0.98152 1.20958 0.99882 0.89848 0.93154 1.20127 0.93541 0.96044 1.07237 1.24956 1.01834 0.99221 0.91297 1.86502 1.37299 1.95376 1.15433 0.94773 0.80236 0.77697 0.88548 1.21002 0.93663 0.97357 0.94484 1.21239 1.00772 0.91564 1.09661 0.92338 0.87636 0.92239 0.76548 0.87795 0.90235 0.87025 0.86950 0.90788 0.88411 0.84709 0.86781 0.77257 1.17808 1.18209 0.84894 0.84108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.87 8.57 -40.55 -0.35 -1.22 16 3 C 0.19 0.37 6.70 -38.70 -0.26 0.11 16 4 C -0.18 -0.29 5.89 -104.85 -0.62 -0.91 16 5 C 0.56 1.65 7.76 -12.47 -0.10 1.55 16 6 O -0.51 -3.45 14.76 -16.59 -0.24 -3.70 16 7 N -0.71 0.39 5.21 -54.06 -0.28 0.10 16 8 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 9 H 0.11 0.03 7.46 -51.93 -0.39 -0.35 16 10 C -0.14 0.60 7.39 -25.91 -0.19 0.41 16 11 C -0.11 0.44 3.49 -89.81 -0.31 0.12 16 12 H 0.10 -0.35 8.12 -51.93 -0.42 -0.77 16 13 C -0.02 0.07 5.54 -29.52 -0.16 -0.09 16 14 C 0.20 0.08 15.42 -20.69 -0.32 -0.24 16 15 N -0.44 -1.98 18.55 42.24 0.78 -1.20 16 16 C -0.15 0.33 7.43 -25.92 -0.19 0.14 16 17 C -0.02 0.01 9.08 -39.19 -0.36 -0.34 16 18 C -0.17 0.20 5.39 -104.67 -0.56 -0.37 16 19 C -0.06 0.11 2.82 36.00 0.10 0.21 16 20 O -0.54 0.67 12.76 -35.23 -0.45 0.22 16 21 Si 0.69 -1.50 29.77 -169.99 -5.06 -6.56 16 22 C -0.05 0.07 8.66 -39.53 -0.34 -0.27 16 23 C -0.21 0.14 9.03 -39.47 -0.36 -0.22 16 24 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 25 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 27 H 0.40 -1.11 6.73 -40.82 -0.27 -1.39 16 28 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 29 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 30 H 0.11 -0.68 7.85 -51.93 -0.41 -1.09 16 31 H 0.11 -0.71 8.14 -51.93 -0.42 -1.13 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.10 -0.31 7.90 -51.93 -0.41 -0.72 16 34 H 0.14 -0.33 6.40 -52.49 -0.34 -0.66 16 35 H 0.11 -0.17 7.96 -51.93 -0.41 -0.59 16 36 H 0.38 -1.79 8.70 45.56 0.40 -1.40 16 37 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 38 H -0.26 -0.01 7.11 56.52 0.40 0.40 16 39 H 0.13 -0.48 4.85 -52.49 -0.25 -0.74 16 40 H 0.14 -0.40 6.30 -52.49 -0.33 -0.73 16 LS Contribution 340.82 15.07 5.14 5.14 Total: 0.00 -11.31 340.82 -8.38 -19.69 By element: Atomic # 1 Polarization: -8.14 SS G_CDS: -4.94 Total: -13.08 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: -2.97 Total: 0.61 kcal Atomic # 7 Polarization: -1.59 SS G_CDS: 0.50 Total: -1.09 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -1.04 Total: -4.70 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.06 Total: -6.56 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -11.31 -8.38 -19.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_12496546.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.460 kcal (2) G-P(sol) polarization free energy of solvation -11.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.688 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds