Wall clock time and date at job start Sun Mar 7 2021 06:07:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35882 * 117.00013 * 2 1 4 4 C 1.38824 * 119.93388 * 179.97438 * 3 2 1 5 5 C 1.37928 * 120.06125 * 179.97438 * 4 3 2 6 6 C 1.39357 * 119.93677 * 359.97438 * 5 4 3 7 7 C 1.48405 * 120.06371 * 179.97438 * 6 5 4 8 8 N 1.31635 * 126.03345 * 317.77426 * 7 6 5 9 9 N 1.40076 * 108.10333 * 180.12573 * 8 7 6 10 10 C 1.46496 * 125.92437 * 179.85519 * 9 8 7 11 11 C 1.50703 * 109.47559 * 304.69144 * 10 9 8 12 12 O 1.21285 * 119.99460 * 359.97438 * 11 10 9 13 13 N 1.34774 * 119.99820 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99476 * 180.02562 * 13 11 10 15 15 H 1.08998 * 112.90976 * 336.24790 * 14 13 11 16 16 C 1.53778 * 113.61507 * 107.50230 * 14 13 11 17 17 C 1.53776 * 87.08497 * 89.11510 * 16 14 13 18 18 H 1.09003 * 113.68895 * 270.87707 * 17 16 14 19 19 C 1.52998 * 113.61924 * 139.98268 * 17 16 14 20 20 C 1.47198 * 109.47486 * 87.50102 * 19 17 16 21 21 N 9.38246 * 136.27304 * 301.80220 * 8 1 2 22 22 C 1.53780 * 87.08076 * 25.43274 * 17 16 14 23 23 C 1.35032 * 108.14076 * 359.59577 * 9 8 7 24 24 C 1.35085 * 107.98217 * 0.23942 * 23 9 8 25 25 C 1.50701 * 126.07621 * 180.02562 * 24 23 9 26 26 O 1.42908 * 109.47048 * 105.16618 * 25 24 23 27 27 Si 1.86299 * 109.47207 * 345.16695 * 25 24 23 28 28 C 1.39354 * 119.87055 * 0.25308 * 6 5 4 29 29 C 1.37923 * 119.93450 * 359.47018 * 28 6 5 30 30 H 1.09002 * 109.47224 * 299.99980 * 1 2 3 31 31 H 1.08995 * 109.46770 * 60.00211 * 1 2 3 32 32 H 1.09000 * 109.47055 * 180.02562 * 1 2 3 33 33 H 1.07997 * 119.97059 * 359.97438 * 4 3 2 34 34 H 1.07998 * 120.03142 * 179.97438 * 5 4 3 35 35 H 1.09006 * 109.47023 * 184.69038 * 10 9 8 36 36 H 1.09004 * 109.47409 * 64.69667 * 10 9 8 37 37 H 0.96995 * 120.00203 * 359.97438 * 13 11 10 38 38 H 1.09002 * 113.61729 * 203.66659 * 16 14 13 39 39 H 1.09001 * 113.61456 * 334.56694 * 16 14 13 40 40 H 1.09002 * 109.46998 * 207.50899 * 19 17 16 41 41 H 1.09004 * 109.46606 * 327.50122 * 19 17 16 42 42 H 1.08995 * 113.61919 * 220.02475 * 22 17 16 43 43 H 1.08995 * 113.69372 * 89.12564 * 22 17 16 44 44 H 1.08002 * 126.01148 * 180.27399 * 23 9 8 45 45 H 1.09003 * 109.47424 * 225.16401 * 25 24 23 46 46 H 0.96696 * 114.00111 * 180.02562 * 26 25 24 47 47 H 1.48489 * 110.00027 * 298.67933 * 27 25 24 48 48 H 1.48501 * 109.99987 * 60.00005 * 27 25 24 49 49 H 1.07997 * 120.02869 * 179.74903 * 28 6 5 50 50 H 1.08007 * 119.96501 * 180.25133 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2107 0.0000 4 6 3.4323 1.2818 0.0005 5 6 4.0612 2.5093 0.0000 6 6 3.3035 3.6789 -0.0016 7 6 3.9773 5.0012 -0.0016 8 7 5.0303 5.3337 0.7148 9 7 5.3495 6.6669 0.4268 10 6 6.4536 7.4320 1.0113 11 6 6.3436 7.4047 2.5140 12 8 5.4322 6.8056 3.0445 13 7 7.2573 8.0470 3.2683 14 6 7.1506 8.0200 4.7292 15 1 6.1350 7.8315 5.0770 16 6 8.2086 7.1342 5.4079 17 6 9.1129 8.3774 5.4437 18 1 9.7295 8.4963 4.5527 19 6 9.9110 8.5178 6.7415 20 6 11.1764 7.7754 6.6221 21 7 12.1571 7.1976 6.5257 22 6 7.8253 9.2179 5.4184 23 6 4.4663 7.1225 -0.4874 24 6 3.6069 6.1201 -0.7728 25 6 2.4566 6.1868 -1.7441 26 8 2.7962 5.4726 -2.9344 27 14 2.1036 7.9664 -2.1672 28 6 1.9120 3.6044 0.0026 29 6 1.2886 2.3741 -0.0026 30 1 -0.3634 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 4.0190 0.3750 0.0014 34 1 5.1398 2.5640 0.0008 35 1 6.4057 8.4635 0.6621 36 1 7.4027 6.9896 0.7084 37 1 7.9859 8.5265 2.8440 38 1 7.9134 6.7804 6.3957 39 1 8.5869 6.3374 4.7674 40 1 10.1234 9.5710 6.9253 41 1 9.3298 8.1143 7.5707 42 1 7.8941 10.1032 4.7864 43 1 7.4243 9.4346 6.4084 44 1 4.4502 8.1138 -0.9157 45 1 1.5722 5.7386 -1.2913 46 1 2.1005 5.4739 -3.6059 47 1 1.7182 8.7127 -0.9427 48 1 3.3017 8.5889 -2.7854 49 1 1.3223 4.5092 0.0055 50 1 0.2101 2.3158 -0.0034 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_12622750.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:21 Heat of formation + Delta-G solvation = 69.881055 kcal Electronic energy + Delta-G solvation = -33978.602150 eV Core-core repulsion = 29362.274124 eV Total energy + Delta-G solvation = -4616.328026 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.168 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.45580 -41.45531 -40.82998 -39.69291 -38.28470 -37.53986 -37.32790 -34.87033 -34.51182 -32.24316 -31.98775 -31.51307 -30.85745 -28.92773 -27.93273 -26.96985 -25.95155 -24.72168 -23.63588 -23.46678 -22.14596 -21.53457 -20.78968 -20.53704 -19.05566 -18.95681 -18.36927 -18.29210 -18.18562 -17.14815 -16.95268 -16.91673 -16.57992 -16.37970 -16.09186 -15.94342 -15.64099 -15.61136 -15.20200 -15.04176 -14.86707 -14.83841 -14.54933 -14.38711 -14.14942 -14.09193 -14.05746 -13.77295 -13.66515 -13.57151 -13.40305 -13.21765 -12.91468 -12.66862 -12.62391 -12.58326 -12.20805 -12.08450 -11.99855 -11.74216 -11.67827 -11.55405 -11.44077 -11.17526 -10.39020 -10.25779 -10.10861 -9.82448 -9.60575 -8.78312 -5.01488 0.30117 0.54104 0.80205 1.16467 1.32487 1.37383 1.62006 1.72423 1.77189 1.82901 1.91149 1.97109 2.41874 2.82408 2.97309 3.18419 3.22662 3.35684 3.41518 3.56551 3.58988 3.62872 3.67125 3.80870 3.83329 3.89043 4.01410 4.03993 4.13981 4.24208 4.26875 4.28919 4.35935 4.36826 4.47195 4.48158 4.50806 4.59330 4.61643 4.62834 4.74458 4.80417 4.82271 4.83925 4.91551 4.93028 5.18441 5.20298 5.36356 5.44942 5.68366 5.69785 5.80717 5.87244 6.22049 6.52756 6.57718 6.68649 6.78684 6.99510 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.317 6.317 3 C 0.135 3.865 4 C -0.151 4.151 5 C -0.049 4.049 6 C -0.044 4.044 7 C 0.141 3.859 8 N -0.248 5.248 9 N -0.359 5.359 10 C 0.116 3.884 11 C 0.502 3.498 12 O -0.500 6.500 13 N -0.714 5.714 14 C 0.121 3.879 15 H 0.107 0.893 16 C -0.150 4.150 17 C -0.110 4.110 18 H 0.098 0.902 19 C -0.016 4.016 20 C 0.200 3.800 21 N -0.434 5.434 22 C -0.136 4.136 23 C 0.059 3.941 24 C -0.204 4.204 25 C -0.030 4.030 26 O -0.543 6.543 27 Si 0.679 3.321 28 C -0.053 4.053 29 C -0.207 4.207 30 H 0.056 0.944 31 H 0.057 0.943 32 H 0.101 0.899 33 H 0.134 0.866 34 H 0.131 0.869 35 H 0.127 0.873 36 H 0.120 0.880 37 H 0.402 0.598 38 H 0.098 0.902 39 H 0.074 0.926 40 H 0.113 0.887 41 H 0.112 0.888 42 H 0.080 0.920 43 H 0.104 0.896 44 H 0.172 0.828 45 H 0.070 0.930 46 H 0.378 0.622 47 H -0.256 1.256 48 H -0.253 1.253 49 H 0.128 0.872 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.769 7.123 -1.873 8.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.089 3.911 4 C -0.170 4.170 5 C -0.069 4.069 6 C -0.046 4.046 7 C -0.025 4.025 8 N -0.068 5.068 9 N -0.140 5.140 10 C -0.009 4.009 11 C 0.285 3.715 12 O -0.372 6.372 13 N -0.367 5.367 14 C 0.015 3.985 15 H 0.125 0.875 16 C -0.189 4.189 17 C -0.130 4.130 18 H 0.116 0.884 19 C -0.056 4.056 20 C -0.118 4.118 21 N -0.111 5.111 22 C -0.174 4.174 23 C -0.085 4.085 24 C -0.215 4.215 25 C -0.142 4.142 26 O -0.349 6.349 27 Si 0.580 3.420 28 C -0.072 4.072 29 C -0.226 4.226 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.119 0.881 33 H 0.152 0.848 34 H 0.149 0.851 35 H 0.145 0.855 36 H 0.138 0.862 37 H 0.237 0.763 38 H 0.117 0.883 39 H 0.093 0.907 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.098 0.902 43 H 0.123 0.877 44 H 0.189 0.811 45 H 0.088 0.912 46 H 0.224 0.776 47 H -0.180 1.180 48 H -0.178 1.178 49 H 0.145 0.855 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.117 6.100 -0.229 6.461 hybrid contribution -0.383 0.693 -0.352 0.866 sum -2.500 6.793 -0.581 7.261 Atomic orbital electron populations 1.23098 0.78114 1.04200 1.01499 1.86085 1.21625 1.26879 1.88401 1.19126 0.92339 0.84216 0.95408 1.20354 0.91401 0.98523 1.06691 1.20969 0.99957 0.90409 0.95528 1.17552 0.92358 0.88882 1.05818 1.20538 0.93797 0.93628 0.94568 1.77811 1.16387 0.91550 1.21079 1.47770 1.24059 1.09507 1.32698 1.21505 0.90096 0.97551 0.91790 1.20528 0.82557 0.79400 0.88984 1.90841 1.32486 1.40384 1.73450 1.45566 1.29887 1.54895 1.06354 1.21814 1.00705 0.96825 0.79138 0.87487 1.23589 0.96150 0.96884 1.02229 1.22633 0.95150 0.97923 0.97270 0.88424 1.19335 0.86626 0.99850 0.99800 1.29480 0.94732 0.93942 0.93601 1.81566 1.11809 1.09566 1.08163 1.23381 0.94727 0.96972 1.02293 1.22124 0.91845 0.99933 0.94627 1.19387 1.02498 0.93889 1.05751 1.23978 0.95830 1.07882 0.86482 1.86552 1.45047 1.76707 1.26551 0.95293 0.86449 0.75054 0.85246 1.20865 0.92983 0.97261 0.96112 1.21117 1.00156 0.91868 1.09431 0.92509 0.92422 0.88076 0.84793 0.85122 0.85489 0.86246 0.76312 0.88324 0.90733 0.86869 0.86993 0.90161 0.87729 0.81147 0.91197 0.77557 1.18040 1.17765 0.85451 0.84983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.98 10.49 -19.37 -0.20 -1.18 16 3 C 0.13 0.47 6.69 -39.15 -0.26 0.21 16 4 C -0.15 -0.57 9.97 -39.48 -0.39 -0.96 16 5 C -0.05 -0.22 9.77 -39.28 -0.38 -0.60 16 6 C -0.04 -0.21 5.74 -104.88 -0.60 -0.81 16 7 C 0.14 0.79 6.66 -82.78 -0.55 0.24 16 8 N -0.25 -1.56 11.69 33.43 0.39 -1.16 16 9 N -0.36 -1.13 3.39 -62.58 -0.21 -1.34 16 10 C 0.12 -0.16 6.98 -5.19 -0.04 -0.20 16 11 C 0.50 0.36 7.86 -10.99 -0.09 0.27 16 12 O -0.50 -3.01 15.32 5.55 0.09 -2.93 16 13 N -0.71 2.01 5.26 -53.02 -0.28 1.73 16 14 C 0.12 -0.32 4.32 -67.12 -0.29 -0.61 16 15 H 0.11 -0.04 7.47 -51.93 -0.39 -0.43 16 16 C -0.15 0.43 7.43 -25.92 -0.19 0.24 16 17 C -0.11 0.54 3.49 -89.81 -0.31 0.23 16 18 H 0.10 -0.48 8.12 -51.93 -0.42 -0.90 16 19 C -0.02 0.08 5.54 -29.52 -0.16 -0.08 16 20 C 0.20 -0.02 15.44 -20.55 -0.32 -0.34 16 21 N -0.43 -1.82 18.58 42.41 0.79 -1.03 16 22 C -0.14 0.75 7.39 -25.92 -0.19 0.56 16 23 C 0.06 0.15 9.96 -17.27 -0.17 -0.02 16 24 C -0.20 -0.78 5.39 -104.76 -0.56 -1.34 16 25 C -0.03 -0.02 2.50 36.01 0.09 0.07 16 26 O -0.54 -0.62 12.86 -35.23 -0.45 -1.07 16 27 Si 0.68 -0.81 30.77 -169.99 -5.23 -6.05 16 28 C -0.05 -0.16 8.88 -39.28 -0.35 -0.51 16 29 C -0.21 -0.46 9.02 -39.48 -0.36 -0.82 16 30 H 0.06 -0.09 7.66 -51.93 -0.40 -0.48 16 31 H 0.06 -0.10 7.65 -51.93 -0.40 -0.50 16 32 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.13 0.32 8.06 -52.49 -0.42 -0.10 16 34 H 0.13 0.50 8.06 -52.49 -0.42 0.08 16 35 H 0.13 -0.69 8.07 -51.93 -0.42 -1.11 16 36 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.40 -2.40 8.70 -40.82 -0.36 -2.76 16 38 H 0.10 -0.34 7.90 -51.93 -0.41 -0.75 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.11 -0.80 8.14 -51.93 -0.42 -1.22 16 41 H 0.11 -0.73 7.84 -51.93 -0.41 -1.14 16 42 H 0.08 -0.49 8.14 -51.93 -0.42 -0.91 16 43 H 0.10 -0.68 8.10 -51.93 -0.42 -1.10 16 44 H 0.17 -0.03 6.35 -52.49 -0.33 -0.36 16 45 H 0.07 -0.03 5.56 -51.93 -0.29 -0.32 16 46 H 0.38 -1.49 8.74 45.56 0.40 -1.09 16 47 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 48 H -0.25 -0.26 7.04 56.52 0.40 0.14 16 49 H 0.13 0.15 6.20 -52.49 -0.33 -0.17 16 50 H 0.13 -0.04 6.28 -52.48 -0.33 -0.37 16 LS Contribution 426.82 15.07 6.43 6.43 Total: 0.00 -16.03 426.82 -9.48 -25.51 By element: Atomic # 1 Polarization: -8.77 SS G_CDS: -6.66 Total: -15.42 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: -4.14 Total: -3.49 kcal Atomic # 7 Polarization: -2.49 SS G_CDS: 0.69 Total: -1.81 kcal Atomic # 8 Polarization: -4.61 SS G_CDS: -0.57 Total: -5.18 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.23 Total: -6.05 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -16.03 -9.48 -25.51 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_12622750.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.394 kcal (2) G-P(sol) polarization free energy of solvation -16.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.512 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds