Wall clock time and date at job start Sun Mar 7 2021 06:07:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.53004 * 109.46999 * 211.58875 * 3 2 1 5 5 H 1.09002 * 112.84731 * 316.20117 * 4 3 2 6 6 C 1.53778 * 113.61587 * 185.00190 * 4 3 2 7 7 C 1.53778 * 87.08096 * 220.02136 * 6 4 3 8 8 H 1.08999 * 113.61609 * 139.98506 * 7 6 4 9 9 N 1.46501 * 113.61192 * 270.79851 * 7 6 4 10 10 C 1.34774 * 119.99979 * 204.99784 * 9 7 6 11 11 O 1.21283 * 120.00374 * 0.02562 * 10 9 7 12 12 C 1.50702 * 120.00184 * 179.97438 * 10 9 7 13 13 C 1.50701 * 109.47206 * 185.82759 * 12 10 9 14 14 C 1.39313 * 120.06284 * 80.03577 * 13 12 10 15 15 C 1.48393 * 120.11840 * 0.02562 * 14 13 12 16 16 C 1.39340 * 120.12037 * 236.22206 * 15 14 13 17 17 C 1.38022 * 119.87614 * 179.72231 * 16 15 14 18 18 C 1.38320 * 120.12015 * 0.53441 * 17 16 15 19 19 C 1.50702 * 119.87800 * 179.74584 * 18 17 16 20 20 O 1.42894 * 109.47324 * 120.01856 * 19 18 17 21 21 Si 1.86303 * 109.46856 * 0.02562 * 19 18 17 22 22 C 1.38326 * 120.24578 * 359.76027 * 18 17 16 23 23 C 1.38017 * 120.12035 * 359.96213 * 22 18 17 24 24 C 1.39359 * 119.75950 * 179.74912 * 14 13 12 25 25 C 1.37997 * 119.87725 * 0.57173 * 24 14 13 26 26 C 1.38348 * 120.12022 * 359.68038 * 25 24 14 27 27 C 1.38038 * 120.05964 * 260.31167 * 13 12 10 28 28 C 1.53780 * 113.61151 * 87.50327 * 4 3 2 29 29 H 1.09000 * 109.47787 * 331.58998 * 3 2 1 30 30 H 1.09005 * 109.46757 * 91.59263 * 3 2 1 31 31 H 1.09001 * 113.61399 * 334.57002 * 6 4 3 32 32 H 1.08999 * 113.61139 * 105.47032 * 6 4 3 33 33 H 0.97004 * 120.00464 * 25.00499 * 9 7 6 34 34 H 1.08997 * 109.47272 * 305.82717 * 12 10 9 35 35 H 1.08999 * 109.47154 * 65.82861 * 12 10 9 36 36 H 1.08002 * 120.05924 * 359.97438 * 16 15 14 37 37 H 1.07998 * 119.93389 * 180.27902 * 17 16 15 38 38 H 1.09000 * 109.47216 * 240.02102 * 19 18 17 39 39 H 0.96704 * 114.00232 * 300.00028 * 20 19 18 40 40 H 1.48493 * 110.00323 * 58.68035 * 21 19 18 41 41 H 1.48499 * 109.99637 * 180.02562 * 21 19 18 42 42 H 1.07992 * 119.94072 * 179.97438 * 22 18 17 43 43 H 1.07998 * 120.05971 * 179.97438 * 23 22 18 44 44 H 1.08001 * 120.06151 * 180.27814 * 24 14 13 45 45 H 1.07998 * 119.93956 * 179.70246 * 25 24 14 46 46 H 1.07996 * 119.87865 * 179.97438 * 26 25 24 47 47 H 1.07998 * 119.94219 * 359.97438 * 27 13 12 48 48 H 1.08999 * 113.61426 * 254.53114 * 28 4 3 49 49 H 1.09000 * 113.61486 * 25.44009 * 28 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1175 1.2297 0.7556 5 1 2.5746 2.1394 0.4990 6 6 4.6461 1.3909 0.7102 7 6 4.5659 1.8201 2.1847 8 1 5.3724 1.4213 2.8000 9 7 4.3705 3.2606 2.3667 10 6 4.7709 3.8560 3.5076 11 8 5.2934 3.1995 4.3833 12 6 4.5705 5.3379 3.6947 13 6 5.2266 5.7754 4.9789 14 6 6.6021 5.9927 5.0210 15 6 7.4249 5.7947 3.8021 16 6 8.5056 4.9154 3.8232 17 6 9.2641 4.7308 2.6849 18 6 8.9598 5.4250 1.5279 19 6 9.7950 5.2235 0.2898 20 8 8.9683 4.7348 -0.7682 21 14 11.1437 3.9883 0.6450 22 6 7.8918 6.3037 1.5031 23 6 7.1231 6.4917 2.6339 24 6 7.2015 6.4022 6.2106 25 6 6.4325 6.5789 7.3427 26 6 5.0677 6.3566 7.2965 27 6 4.4667 5.9561 6.1170 28 6 3.2650 1.0045 2.2697 29 1 2.9719 -0.9030 0.4889 30 1 2.9713 0.0294 -1.0273 31 1 5.1797 0.4529 0.5568 32 1 4.9817 2.1841 0.0421 33 1 3.9528 3.7858 1.6663 34 1 5.0176 5.8736 2.8574 35 1 3.5037 5.5576 3.7386 36 1 8.7468 4.3763 4.7274 37 1 10.0992 4.0461 2.6990 38 1 10.2407 6.1731 -0.0063 39 1 8.5383 3.8908 -0.5737 40 1 10.5498 2.6988 1.0804 41 1 11.9750 3.7812 -0.5680 42 1 7.6588 6.8435 0.5972 43 1 6.2898 7.1784 2.6136 44 1 8.2668 6.5764 6.2476 45 1 6.8967 6.8916 8.2663 46 1 4.4696 6.4956 8.1849 47 1 3.4010 5.7840 6.0865 48 1 2.4857 1.4857 2.8607 49 1 3.4211 -0.0392 2.5427 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_13158394.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:36 Heat of formation + Delta-G solvation = 38.599163 kcal Electronic energy + Delta-G solvation = -32134.483777 eV Core-core repulsion = 27993.644759 eV Total energy + Delta-G solvation = -4140.839018 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -41.61483 -40.87815 -39.88086 -39.17157 -37.63845 -37.48621 -34.62087 -34.21652 -33.38634 -31.95008 -31.14472 -30.67939 -28.65939 -26.62119 -26.56273 -24.53810 -23.95612 -23.40231 -22.80518 -21.84996 -21.29616 -20.21240 -18.77730 -18.55907 -18.00329 -17.87362 -17.11642 -16.95473 -16.67946 -16.31762 -16.18326 -15.98106 -15.91559 -15.74314 -15.45223 -15.35987 -15.01471 -14.79394 -14.51544 -14.40552 -14.10512 -14.07281 -13.95459 -13.73204 -13.64531 -13.38434 -13.26724 -13.21744 -13.12337 -12.92395 -12.36615 -12.35530 -12.28791 -12.04778 -11.86861 -11.75163 -11.61238 -11.44744 -11.11620 -10.95795 -10.60433 -10.13349 -9.99759 -9.90559 -9.73102 -9.20268 -4.90902 -0.07147 0.41707 0.42219 0.63072 1.32996 1.60731 1.65556 1.81278 1.86214 1.95101 2.19675 2.65138 2.89619 3.06813 3.43319 3.54864 3.55517 3.67892 3.71380 3.78521 3.88662 3.91099 3.96607 3.98023 4.02322 4.07664 4.19351 4.31681 4.40400 4.40800 4.51885 4.54455 4.60142 4.64493 4.67237 4.70921 4.76332 4.86251 4.89547 4.92544 4.94689 5.00775 5.05974 5.10001 5.12232 5.18860 5.30469 5.37269 5.43894 5.50973 5.54638 5.59290 5.67675 5.69272 5.96834 6.06339 6.51739 6.56784 6.65874 7.29826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.517 5.517 2 C 0.233 3.767 3 C -0.015 4.015 4 C -0.098 4.098 5 H 0.098 0.902 6 C -0.118 4.118 7 C 0.109 3.891 8 H 0.079 0.921 9 N -0.704 5.704 10 C 0.519 3.481 11 O -0.572 6.572 12 C -0.111 4.111 13 C -0.064 4.064 14 C -0.050 4.050 15 C -0.041 4.041 16 C -0.108 4.108 17 C -0.115 4.115 18 C -0.117 4.117 19 C -0.073 4.073 20 O -0.542 6.542 21 Si 0.748 3.252 22 C -0.090 4.090 23 C -0.115 4.115 24 C -0.118 4.118 25 C -0.126 4.126 26 C -0.126 4.126 27 C -0.121 4.121 28 C -0.155 4.155 29 H 0.134 0.866 30 H 0.144 0.856 31 H 0.119 0.881 32 H 0.090 0.910 33 H 0.414 0.586 34 H 0.124 0.876 35 H 0.125 0.875 36 H 0.120 0.880 37 H 0.138 0.862 38 H 0.127 0.873 39 H 0.385 0.615 40 H -0.286 1.286 41 H -0.301 1.301 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.132 0.868 45 H 0.140 0.860 46 H 0.138 0.862 47 H 0.134 0.866 48 H 0.051 0.949 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.056 2.282 -1.939 5.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.195 5.195 2 C -0.083 4.083 3 C -0.055 4.055 4 C -0.118 4.118 5 H 0.116 0.884 6 C -0.156 4.156 7 C 0.003 3.997 8 H 0.097 0.903 9 N -0.356 5.356 10 C 0.306 3.694 11 O -0.450 6.450 12 C -0.150 4.150 13 C -0.064 4.064 14 C -0.050 4.050 15 C -0.041 4.041 16 C -0.126 4.126 17 C -0.133 4.133 18 C -0.117 4.117 19 C -0.183 4.183 20 O -0.350 6.350 21 Si 0.655 3.345 22 C -0.108 4.108 23 C -0.132 4.132 24 C -0.136 4.136 25 C -0.144 4.144 26 C -0.144 4.144 27 C -0.139 4.139 28 C -0.193 4.193 29 H 0.152 0.848 30 H 0.161 0.839 31 H 0.137 0.863 32 H 0.109 0.891 33 H 0.251 0.749 34 H 0.142 0.858 35 H 0.143 0.857 36 H 0.138 0.862 37 H 0.155 0.845 38 H 0.145 0.855 39 H 0.235 0.765 40 H -0.212 1.212 41 H -0.229 1.229 42 H 0.156 0.844 43 H 0.158 0.842 44 H 0.150 0.850 45 H 0.158 0.842 46 H 0.156 0.844 47 H 0.152 0.848 48 H 0.070 0.930 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 3.270 1.583 -1.808 4.058 hybrid contribution -1.034 -0.394 -0.242 1.133 sum 2.236 1.190 -2.050 3.258 Atomic orbital electron populations 1.81318 1.15798 1.10924 1.11466 1.30104 0.96126 0.91150 0.90918 1.19716 0.78349 1.01320 1.06088 1.22517 0.97161 0.97869 0.94223 0.88410 1.23326 0.94520 1.04057 0.93693 1.21854 0.98119 0.80473 0.99237 0.90312 1.45589 1.62307 1.08887 1.18827 1.20789 0.76842 0.90146 0.81593 1.90721 1.44230 1.66929 1.43154 1.20927 1.04280 0.92075 0.97684 1.19442 0.92579 0.99240 0.95174 1.18751 0.92550 1.00308 0.93372 1.18845 0.95154 0.97108 0.93041 1.21221 0.94814 0.97886 0.98687 1.21053 0.99714 0.99829 0.92689 1.20344 0.97927 0.98131 0.95284 1.25057 0.98731 1.07789 0.86694 1.86571 1.64728 1.42769 1.40966 0.94083 0.79595 0.77805 0.83061 1.21053 0.94198 0.97234 0.98334 1.21370 1.00490 0.99595 0.91768 1.21392 1.00515 0.99585 0.92096 1.21376 0.94264 0.99940 0.98832 1.21469 0.95398 0.99098 0.98460 1.21214 1.00556 0.99601 0.92496 1.23632 0.97415 1.01577 0.96699 0.84804 0.83873 0.86297 0.89093 0.74911 0.85805 0.85723 0.86159 0.84509 0.85501 0.76550 1.21216 1.22928 0.84432 0.84195 0.85008 0.84233 0.84398 0.84776 0.93021 0.87887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.77 18.54 20.01 0.37 -4.40 16 2 C 0.23 -0.11 15.42 89.44 1.38 1.27 16 3 C -0.02 0.18 5.54 28.79 0.16 0.34 16 4 C -0.10 1.06 3.49 -10.27 -0.04 1.02 16 5 H 0.10 -1.01 8.12 -2.39 -0.02 -1.03 16 6 C -0.12 1.42 7.39 31.12 0.23 1.65 16 7 C 0.11 -0.50 4.32 45.52 0.20 -0.30 16 8 H 0.08 0.09 7.46 -2.39 -0.02 0.08 16 9 N -0.70 2.99 5.27 -440.04 -2.32 0.68 16 10 C 0.52 1.16 7.60 87.66 0.67 1.83 16 11 O -0.57 -6.77 15.64 -3.04 -0.05 -6.82 16 12 C -0.11 0.24 5.31 29.10 0.15 0.40 16 13 C -0.06 -0.19 4.39 -19.65 -0.09 -0.28 16 14 C -0.05 -0.20 5.38 -20.04 -0.11 -0.31 16 15 C -0.04 -0.09 4.73 -20.04 -0.09 -0.18 16 16 C -0.11 -0.27 9.63 22.48 0.22 -0.06 16 17 C -0.12 0.05 8.65 22.24 0.19 0.24 16 18 C -0.12 0.19 5.40 -19.82 -0.11 0.08 16 19 C -0.07 0.20 2.82 71.24 0.20 0.40 16 20 O -0.54 0.50 12.76 -148.98 -1.90 -1.40 16 21 Si 0.75 -1.85 29.78 68.60 2.04 0.20 16 22 C -0.09 0.18 9.59 22.24 0.21 0.40 16 23 C -0.11 0.15 7.84 22.48 0.18 0.33 16 24 C -0.12 -0.42 9.63 22.48 0.22 -0.21 16 25 C -0.13 -0.31 10.03 22.24 0.22 -0.09 16 26 C -0.13 -0.31 10.04 22.31 0.22 -0.08 16 27 C -0.12 -0.34 9.66 22.24 0.21 -0.13 16 28 C -0.15 0.87 7.43 31.12 0.23 1.10 16 29 H 0.13 -2.09 7.84 -2.39 -0.02 -2.11 16 30 H 0.14 -2.45 8.14 -2.38 -0.02 -2.47 16 31 H 0.12 -1.75 8.10 -2.39 -0.02 -1.77 16 32 H 0.09 -1.21 8.14 -2.39 -0.02 -1.23 16 33 H 0.41 -4.14 8.70 -92.71 -0.81 -4.95 16 34 H 0.12 -0.72 4.85 -2.39 -0.01 -0.73 16 35 H 0.12 -0.84 8.01 -2.39 -0.02 -0.86 16 36 H 0.12 0.38 8.06 -2.91 -0.02 0.35 16 37 H 0.14 -0.46 4.86 -2.91 -0.01 -0.47 16 38 H 0.13 -0.54 7.96 -2.39 -0.02 -0.56 16 39 H 0.39 -2.46 8.70 -74.05 -0.64 -3.11 16 40 H -0.29 -0.51 7.11 99.48 0.71 0.19 16 41 H -0.30 -1.52 7.11 99.48 0.71 -0.81 16 42 H 0.14 -0.57 8.06 -2.91 -0.02 -0.59 16 43 H 0.14 -0.64 7.07 -2.91 -0.02 -0.67 16 44 H 0.13 0.12 8.06 -2.91 -0.02 0.10 16 45 H 0.14 -0.22 8.06 -2.91 -0.02 -0.25 16 46 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 47 H 0.13 -0.09 8.04 -2.91 -0.02 -0.12 16 48 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 49 H 0.10 -0.73 7.90 -2.39 -0.02 -0.75 16 Total: 0.00 -28.57 412.81 2.19 -26.38 By element: Atomic # 1 Polarization: -21.63 SS G_CDS: -0.41 Total: -22.04 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: 4.46 Total: 7.41 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -1.95 Total: -3.72 kcal Atomic # 8 Polarization: -6.28 SS G_CDS: -1.95 Total: -8.22 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: 2.04 Total: 0.20 kcal Total: -28.57 2.19 -26.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13158394.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.978 kcal (2) G-P(sol) polarization free energy of solvation -28.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.379 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds