Wall clock time and date at job start Sun Mar 7 2021 06:07:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.53002 * 109.46559 * 186.50686 * 3 2 1 5 5 H 1.08999 * 112.85259 * 316.19866 * 4 3 2 6 6 C 1.53787 * 113.61308 * 184.99846 * 4 3 2 7 7 C 1.53781 * 87.08288 * 219.93723 * 6 4 3 8 8 H 1.08994 * 113.61654 * 140.06378 * 7 6 4 9 9 N 1.46506 * 113.61635 * 270.88837 * 7 6 4 10 10 C 1.34775 * 119.99779 * 204.99986 * 9 7 6 11 11 O 1.21583 * 120.00327 * 0.02562 * 10 9 7 12 12 C 1.47571 * 119.99721 * 179.97438 * 10 9 7 13 13 C 1.39425 * 120.12095 * 0.28109 * 12 10 9 14 14 C 1.39209 * 119.75315 * 180.26948 * 13 12 10 15 15 C 1.47824 * 119.99572 * 179.74593 * 14 13 12 16 16 C 1.35939 * 125.92674 * 179.44067 * 15 14 13 17 17 C 1.40965 * 106.73926 * 180.26371 * 16 15 14 18 18 C 1.34700 * 107.03332 * 359.97438 * 17 16 15 19 19 C 1.50695 * 125.66992 * 180.02562 * 18 17 16 20 20 O 1.42898 * 109.47430 * 65.00067 * 19 18 17 21 21 Si 1.86301 * 109.47630 * 185.00425 * 19 18 17 22 22 O 1.34342 * 108.66978 * 0.02562 * 18 17 16 23 23 C 1.39807 * 120.00375 * 359.47459 * 14 13 12 24 24 C 1.37813 * 120.24119 * 0.22375 * 23 14 13 25 25 C 1.38775 * 120.24581 * 0.05371 * 24 23 14 26 26 O 1.35644 * 120.00406 * 179.97438 * 25 24 23 27 27 C 1.53782 * 87.08087 * 25.43200 * 7 6 4 28 28 H 1.08997 * 109.47150 * 66.51313 * 3 2 1 29 29 H 1.08997 * 109.47535 * 306.50434 * 3 2 1 30 30 H 1.09004 * 113.60939 * 105.38847 * 6 4 3 31 31 H 1.08996 * 113.61335 * 334.48556 * 6 4 3 32 32 H 0.96999 * 119.99818 * 24.99411 * 9 7 6 33 33 H 1.08001 * 120.12167 * 359.97438 * 13 12 10 34 34 H 1.07998 * 126.62756 * 0.26385 * 16 15 14 35 35 H 1.08006 * 126.48269 * 180.02562 * 17 16 15 36 36 H 1.09005 * 109.47056 * 305.00384 * 19 18 17 37 37 H 0.96704 * 113.99759 * 59.99672 * 20 19 18 38 38 H 1.48496 * 110.00422 * 180.02562 * 21 19 18 39 39 H 1.48496 * 109.99886 * 301.32082 * 21 19 18 40 40 H 1.08000 * 119.87684 * 180.25674 * 23 14 13 41 41 H 1.08002 * 119.87489 * 180.02562 * 24 23 14 42 42 H 0.96702 * 114.00613 * 89.99462 * 26 25 24 43 43 H 1.09004 * 113.61087 * 89.11599 * 27 7 6 44 44 H 1.08999 * 113.62151 * 220.01487 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1172 1.4342 0.1635 5 1 2.5744 2.1493 -0.4547 6 6 4.6459 1.5610 0.0543 7 6 4.5652 2.5765 1.2063 8 1 5.3721 2.4783 1.9324 9 7 4.3676 3.9575 0.7587 10 6 4.7673 4.9820 1.5377 11 8 5.2922 4.7604 2.6118 12 6 4.5688 6.3730 1.0865 13 6 3.9629 6.6302 -0.1425 14 6 3.7845 7.9452 -0.5631 15 6 3.1478 8.2239 -1.8677 16 6 2.9054 9.4553 -2.3902 17 6 2.2838 9.2514 -3.6388 18 6 2.1792 7.9200 -3.8148 19 6 1.5759 7.2370 -5.0150 20 8 2.3701 7.5143 -6.1701 21 14 1.5255 5.3978 -4.7229 22 8 2.7021 7.3021 -2.7426 23 6 4.2025 9.0023 0.2508 24 6 4.7958 8.7482 1.4684 25 6 4.9838 7.4411 1.8952 26 8 5.5687 7.1966 3.0944 27 6 3.2642 1.8742 1.6297 28 1 2.9715 -0.4087 -0.9425 29 1 2.9716 -0.6105 0.8260 30 1 4.9818 1.9950 -0.8875 31 1 5.1796 0.6470 0.3146 32 1 3.9493 4.1343 -0.0984 33 1 3.6374 5.8122 -0.7680 34 1 3.1432 10.4059 -1.9363 35 1 1.9544 10.0177 -4.3250 36 1 0.5631 7.6077 -5.1730 37 1 3.2858 7.2114 -6.0998 38 1 0.9332 4.7126 -5.8997 39 1 2.8969 4.8852 -4.4745 40 1 4.0593 10.0218 -0.0757 41 1 5.1160 9.5693 2.0926 42 1 4.9456 7.1389 3.8316 43 1 3.4202 1.0458 2.3206 44 1 2.4847 2.5609 1.9597 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_13259648.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:41 Heat of formation + Delta-G solvation = -5.320326 kcal Electronic energy + Delta-G solvation = -30482.718131 eV Core-core repulsion = 26141.911615 eV Total energy + Delta-G solvation = -4340.806516 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.130 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.76115 -41.77949 -40.72113 -39.11860 -38.26041 -37.85708 -37.38931 -34.80278 -34.21985 -32.84414 -32.55991 -31.01285 -30.10078 -26.90824 -26.46709 -25.79134 -24.44267 -23.55435 -22.96686 -21.99630 -21.27404 -20.48223 -19.68843 -19.23468 -18.77347 -18.31915 -17.71392 -17.53427 -17.20735 -16.68158 -16.62329 -16.49915 -16.09017 -16.07165 -15.88690 -15.63860 -15.36318 -14.94545 -14.58261 -14.41822 -14.37492 -14.05167 -14.02229 -13.85153 -13.78218 -13.63478 -13.52756 -13.30357 -13.19596 -13.19162 -12.94171 -12.57599 -12.15409 -12.12878 -11.88411 -11.66877 -11.37539 -11.12176 -10.86753 -10.83529 -10.51858 -10.36937 -10.10185 -8.96855 -5.08512 -0.61685 -0.28248 0.71395 1.03928 1.38950 1.43528 1.61893 1.79390 1.84135 1.84254 1.88180 1.95049 2.57047 2.87856 3.03752 3.08780 3.21107 3.26361 3.41221 3.42521 3.52585 3.66894 3.69264 3.81397 3.91982 3.93155 4.06631 4.09963 4.25282 4.32014 4.32836 4.41606 4.53037 4.55137 4.55765 4.56604 4.69447 4.72612 4.77962 4.86882 4.88307 4.94962 4.98728 5.06025 5.10111 5.35141 5.38888 5.47375 5.91337 6.17407 6.36635 6.61377 6.62339 7.14773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.112 4.112 5 H 0.098 0.902 6 C -0.138 4.138 7 C 0.120 3.880 8 H 0.109 0.891 9 N -0.713 5.713 10 C 0.564 3.436 11 O -0.513 6.513 12 C -0.165 4.165 13 C -0.054 4.054 14 C -0.034 4.034 15 C 0.035 3.965 16 C -0.188 4.188 17 C -0.169 4.169 18 C -0.050 4.050 19 C -0.034 4.034 20 O -0.520 6.520 21 Si 0.696 3.304 22 O -0.166 6.166 23 C -0.052 4.052 24 C -0.148 4.148 25 C 0.181 3.819 26 O -0.475 6.475 27 C -0.149 4.149 28 H 0.113 0.887 29 H 0.112 0.888 30 H 0.079 0.921 31 H 0.105 0.895 32 H 0.399 0.601 33 H 0.135 0.865 34 H 0.155 0.845 35 H 0.154 0.846 36 H 0.137 0.863 37 H 0.380 0.620 38 H -0.248 1.248 39 H -0.253 1.253 40 H 0.140 0.860 41 H 0.146 0.854 42 H 0.400 0.600 43 H 0.098 0.902 44 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.036 0.677 -0.664 1.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.131 4.131 5 H 0.116 0.884 6 C -0.176 4.176 7 C 0.015 3.985 8 H 0.127 0.873 9 N -0.365 5.365 10 C 0.351 3.649 11 O -0.389 6.389 12 C -0.168 4.168 13 C -0.073 4.073 14 C -0.034 4.034 15 C -0.015 4.015 16 C -0.207 4.207 17 C -0.188 4.188 18 C -0.099 4.099 19 C -0.144 4.144 20 O -0.327 6.327 21 Si 0.595 3.405 22 O -0.064 6.064 23 C -0.070 4.070 24 C -0.167 4.167 25 C 0.134 3.866 26 O -0.287 6.287 27 C -0.188 4.188 28 H 0.131 0.869 29 H 0.130 0.870 30 H 0.098 0.902 31 H 0.123 0.877 32 H 0.235 0.765 33 H 0.153 0.847 34 H 0.172 0.828 35 H 0.172 0.828 36 H 0.155 0.845 37 H 0.229 0.771 38 H -0.172 1.172 39 H -0.177 1.177 40 H 0.158 0.842 41 H 0.164 0.836 42 H 0.259 0.741 43 H 0.117 0.883 44 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -0.038 -0.354 -0.632 0.725 hybrid contribution 0.718 0.853 -0.792 1.368 sum 0.679 0.499 -1.424 1.655 Atomic orbital electron populations 1.81293 1.13115 1.08044 1.08599 1.29208 0.95330 0.93606 0.93447 1.19336 0.81725 0.98724 1.05944 1.22647 0.96715 0.95231 0.98540 0.88408 1.23399 0.95060 0.99921 0.99213 1.21816 0.98895 0.80064 0.97728 0.87284 1.45599 1.62960 1.05307 1.22659 1.17962 0.78201 0.84309 0.84426 1.90841 1.41623 1.84994 1.21409 1.20263 1.05550 0.93764 0.97254 1.21286 0.95367 0.96334 0.94273 1.17571 1.01614 0.93557 0.90655 1.20273 1.02946 0.86957 0.91306 1.21866 1.04535 0.97734 0.96546 1.21574 1.03619 0.95574 0.98012 1.22837 1.04122 0.92606 0.90382 1.24337 0.96721 1.12367 0.80947 1.86673 1.26673 1.82656 1.36680 0.94562 0.85607 0.73075 0.87298 1.83919 1.60322 1.36594 1.25519 1.21136 0.94611 0.98893 0.92407 1.21406 1.01150 0.96439 0.97685 1.18593 0.90001 0.90536 0.87499 1.84748 1.35447 1.93524 1.14986 1.23589 0.98299 1.01021 0.95865 0.86944 0.87010 0.90232 0.87699 0.76489 0.84732 0.82778 0.82789 0.84515 0.77138 1.17233 1.17745 0.84199 0.83609 0.74094 0.88321 0.90733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.58 18.54 42.15 0.78 -0.80 16 2 C 0.20 -0.09 15.42 -20.76 -0.32 -0.41 16 3 C -0.02 0.09 5.54 -29.52 -0.16 -0.07 16 4 C -0.11 0.54 3.49 -89.80 -0.31 0.22 16 5 H 0.10 -0.46 8.12 -51.93 -0.42 -0.88 16 6 C -0.14 0.69 7.39 -25.92 -0.19 0.50 16 7 C 0.12 -0.29 4.33 -67.11 -0.29 -0.58 16 8 H 0.11 -0.07 7.46 -51.93 -0.39 -0.45 16 9 N -0.71 1.09 5.21 -54.04 -0.28 0.81 16 10 C 0.56 0.88 7.76 -12.45 -0.10 0.78 16 11 O -0.51 -2.53 14.74 -16.66 -0.25 -2.78 16 12 C -0.16 -0.09 5.88 -104.89 -0.62 -0.71 16 13 C -0.05 0.05 9.20 -38.78 -0.36 -0.31 16 14 C -0.03 0.02 5.87 -105.03 -0.62 -0.60 16 15 C 0.04 0.00 7.03 -36.49 -0.26 -0.25 16 16 C -0.19 0.06 10.26 -39.37 -0.40 -0.34 16 17 C -0.17 -0.01 10.78 -39.80 -0.43 -0.44 16 18 C -0.05 0.01 6.20 -35.56 -0.22 -0.22 16 19 C -0.03 0.04 2.98 36.00 0.11 0.15 16 20 O -0.52 0.01 12.88 -35.23 -0.45 -0.44 16 21 Si 0.70 -1.20 32.11 -169.99 -5.46 -6.66 16 22 O -0.17 -0.04 8.80 4.58 0.04 0.00 16 23 C -0.05 0.09 9.54 -39.15 -0.37 -0.29 16 24 C -0.15 0.18 9.96 -39.54 -0.39 -0.21 16 25 C 0.18 0.12 6.72 -38.63 -0.26 -0.14 16 26 O -0.48 -0.68 11.55 -40.58 -0.47 -1.15 16 27 C -0.15 0.48 7.43 -25.92 -0.19 0.29 16 28 H 0.11 -0.78 8.14 -51.93 -0.42 -1.21 16 29 H 0.11 -0.76 7.85 -51.93 -0.41 -1.16 16 30 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 31 H 0.10 -0.65 8.10 -51.93 -0.42 -1.07 16 32 H 0.40 -1.45 6.73 -40.82 -0.27 -1.72 16 33 H 0.13 -0.37 6.24 -52.49 -0.33 -0.70 16 34 H 0.15 -0.38 7.24 -52.49 -0.38 -0.76 16 35 H 0.15 -0.15 8.06 -52.48 -0.42 -0.57 16 36 H 0.14 -0.35 7.96 -51.93 -0.41 -0.76 16 37 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 38 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 39 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 40 H 0.14 -0.53 6.96 -52.49 -0.37 -0.89 16 41 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 42 H 0.40 -0.92 9.06 45.56 0.41 -0.50 16 43 H 0.10 -0.40 7.90 -51.93 -0.41 -0.81 16 44 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 386.68 15.07 5.83 5.83 Total: 0.00 -11.73 386.68 -9.96 -21.68 By element: Atomic # 1 Polarization: -9.57 SS G_CDS: -4.31 Total: -13.88 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -5.39 Total: -2.61 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: 0.50 Total: 0.00 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -1.13 Total: -4.37 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.46 Total: -6.66 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.73 -9.96 -21.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13259648.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.363 kcal (2) G-P(sol) polarization free energy of solvation -11.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.636 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds