Wall clock time and date at job start Sun Mar 7 2021 06:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 C 1.52995 * 109.47388 * 322.89434 * 3 2 1 5 5 H 1.09007 * 112.84867 * 43.80445 * 4 3 2 6 6 C 1.54052 * 113.61934 * 272.49690 * 4 3 2 7 7 C 1.53784 * 86.98581 * 220.02034 * 6 4 3 8 8 H 1.08999 * 113.61355 * 140.02205 * 7 6 4 9 9 N 1.46501 * 113.61283 * 270.84048 * 7 6 4 10 10 C 1.34780 * 119.99645 * 254.13671 * 9 7 6 11 11 O 1.21285 * 120.00313 * 359.97438 * 10 9 7 12 12 C 1.50708 * 119.99974 * 180.02562 * 10 9 7 13 13 C 1.50694 * 109.46999 * 179.97438 * 12 10 9 14 14 C 1.38279 * 119.93482 * 90.00095 * 13 12 10 15 15 C 1.38126 * 120.06609 * 179.97438 * 14 13 12 16 16 C 1.38828 * 119.93209 * 0.02562 * 15 14 13 17 17 N 1.40205 * 120.06118 * 180.02562 * 16 15 14 18 18 C 1.36567 * 125.66622 * 236.07198 * 17 16 15 19 19 C 1.34847 * 108.20045 * 179.83095 * 18 17 16 20 20 C 1.40935 * 107.46696 * 0.42465 * 19 18 17 21 21 C 1.34855 * 107.46885 * 359.73559 * 20 19 18 22 22 C 1.50703 * 125.89939 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.46858 * 218.22381 * 22 21 20 24 24 Si 1.86296 * 109.47201 * 338.22680 * 22 21 20 25 25 C 1.38821 * 119.87026 * 0.27270 * 16 15 14 26 26 C 1.38128 * 119.93544 * 359.42801 * 25 16 15 27 27 C 1.53779 * 113.61712 * 174.99987 * 4 3 2 28 28 H 1.08998 * 109.46932 * 202.89741 * 3 2 1 29 29 H 1.08999 * 109.46888 * 82.89449 * 3 2 1 30 30 H 1.09006 * 113.69501 * 105.50614 * 6 4 3 31 31 H 1.09000 * 113.61673 * 334.52601 * 6 4 3 32 32 H 0.96991 * 120.00460 * 74.13694 * 9 7 6 33 33 H 1.08994 * 109.47019 * 59.99601 * 12 10 9 34 34 H 1.08996 * 109.46402 * 300.00035 * 12 10 9 35 35 H 1.07998 * 119.96285 * 0.02562 * 14 13 12 36 36 H 1.07997 * 120.03019 * 180.02562 * 15 14 13 37 37 H 1.08002 * 125.89922 * 359.96168 * 18 17 16 38 38 H 1.07999 * 126.26691 * 180.13814 * 19 18 17 39 39 H 1.08003 * 126.26686 * 179.75376 * 20 19 18 40 40 H 1.09005 * 109.46772 * 98.22698 * 22 21 20 41 41 H 0.96702 * 113.99984 * 65.23299 * 23 22 21 42 42 H 1.48502 * 110.00133 * 58.68028 * 24 22 21 43 43 H 1.48501 * 110.00138 * 179.97438 * 24 22 21 44 44 H 1.08004 * 120.03650 * 179.73055 * 25 16 15 45 45 H 1.07996 * 119.96710 * 180.30151 * 26 25 16 46 46 H 1.09000 * 113.61023 * 25.43579 * 27 4 3 47 47 H 1.08997 * 113.69231 * 254.54137 * 27 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1186 -1.1495 0.8702 5 1 2.5766 -2.0802 0.7022 6 6 3.2662 -0.7791 2.3582 7 6 4.5676 -1.5985 2.3493 8 1 5.3744 -1.1427 2.9233 9 7 4.3716 -3.0147 2.6689 10 6 4.7441 -3.4915 3.8733 11 8 5.2419 -2.7483 4.6923 12 6 4.5430 -4.9485 4.2019 13 6 5.0394 -5.2216 5.5983 14 6 4.1783 -5.0982 6.6732 15 6 4.6303 -5.3483 7.9542 16 6 5.9507 -5.7234 8.1620 17 7 6.4122 -5.9785 9.4611 18 6 7.4742 -5.3666 10.0634 19 6 7.6035 -5.8740 11.3061 20 6 6.5921 -6.8407 11.4756 21 6 5.8781 -6.8844 10.3324 22 6 4.6956 -7.7789 10.0627 23 8 4.7430 -8.2362 8.7098 24 14 4.7479 -9.2418 11.2150 25 6 6.8144 -5.8405 7.0816 26 6 6.3551 -5.5950 5.8022 27 6 4.6474 -1.3129 0.8404 28 1 2.9709 0.9475 0.3998 29 1 2.9714 -0.1263 -1.0198 30 1 2.4884 -1.2020 2.9942 31 1 3.4220 0.2859 2.5298 32 1 3.9738 -3.6092 2.0139 33 1 5.0994 -5.5611 3.4926 34 1 3.4825 -5.1921 4.1387 35 1 3.1511 -4.8067 6.5108 36 1 3.9571 -5.2522 8.7933 37 1 8.1008 -4.6059 9.6216 38 1 8.3488 -5.5944 12.0359 39 1 6.4201 -7.4372 12.3594 40 1 3.7734 -7.2208 10.2255 41 1 5.4979 -8.8081 8.5142 42 1 4.7312 -8.7781 12.6257 43 1 3.5865 -10.1313 10.9596 44 1 7.8433 -6.1279 7.2406 45 1 7.0254 -5.6906 4.9608 46 1 5.1801 -0.3935 0.5976 47 1 4.9853 -2.1659 0.2518 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_13287746.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:55 Heat of formation + Delta-G solvation = 69.252474 kcal Electronic energy + Delta-G solvation = -29504.595588 eV Core-core repulsion = 25427.886026 eV Total energy + Delta-G solvation = -4076.709561 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.157 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.58209 -41.51848 -40.28775 -39.21039 -37.63931 -37.43670 -34.81863 -34.64799 -32.09477 -32.01341 -31.07953 -30.92651 -27.85784 -26.93562 -25.96787 -24.70172 -23.90114 -23.29969 -21.76817 -21.34145 -20.54017 -20.45567 -19.17378 -18.89083 -18.07149 -17.47949 -17.22912 -17.04319 -16.60119 -16.29505 -16.05846 -16.02546 -15.74597 -15.56889 -15.26997 -15.07875 -14.70532 -14.49336 -14.44977 -14.34279 -14.12658 -14.06861 -13.90954 -13.76441 -13.65783 -13.30214 -13.25792 -13.14158 -13.03667 -12.63296 -12.58041 -12.17567 -12.13610 -11.94935 -11.84794 -11.70717 -11.39729 -10.97106 -10.69192 -10.15917 -10.14805 -9.91953 -9.13980 -8.96298 -4.98668 0.08290 0.42413 1.13639 1.40286 1.57355 1.66378 1.76963 1.81565 1.91578 2.00366 2.08758 2.18912 2.75278 2.85246 3.24081 3.39656 3.39888 3.54822 3.61123 3.66792 3.73565 3.76318 3.86735 3.94009 4.04175 4.12882 4.22471 4.29372 4.30728 4.39201 4.40843 4.48524 4.52106 4.53316 4.53862 4.62973 4.68246 4.69850 4.84852 4.85634 4.88076 4.98507 5.00114 5.25987 5.28842 5.33780 5.46053 5.46384 5.53350 5.82613 6.03420 6.28448 6.37407 6.54118 6.58826 6.61441 7.16248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.202 3.798 3 C -0.018 4.018 4 C -0.110 4.110 5 H 0.097 0.903 6 C -0.150 4.150 7 C 0.119 3.881 8 H 0.106 0.894 9 N -0.717 5.717 10 C 0.517 3.483 11 O -0.525 6.525 12 C -0.103 4.103 13 C -0.063 4.063 14 C -0.088 4.088 15 C -0.094 4.094 16 C 0.132 3.868 17 N -0.390 5.390 18 C -0.004 4.004 19 C -0.190 4.190 20 C -0.192 4.192 21 C -0.011 4.011 22 C -0.046 4.046 23 O -0.537 6.537 24 Si 0.718 3.282 25 C -0.114 4.114 26 C -0.090 4.090 27 C -0.136 4.136 28 H 0.112 0.888 29 H 0.113 0.887 30 H 0.073 0.927 31 H 0.097 0.903 32 H 0.402 0.598 33 H 0.107 0.893 34 H 0.106 0.894 35 H 0.126 0.874 36 H 0.122 0.878 37 H 0.164 0.836 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.110 0.890 41 H 0.376 0.624 42 H -0.254 1.254 43 H -0.254 1.254 44 H 0.128 0.872 45 H 0.128 0.872 46 H 0.103 0.897 47 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.984 -2.546 -4.846 7.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.116 4.116 3 C -0.058 4.058 4 C -0.130 4.130 5 H 0.116 0.884 6 C -0.189 4.189 7 C 0.014 3.986 8 H 0.124 0.876 9 N -0.369 5.369 10 C 0.303 3.697 11 O -0.399 6.399 12 C -0.143 4.143 13 C -0.064 4.064 14 C -0.107 4.107 15 C -0.113 4.113 16 C 0.043 3.957 17 N -0.063 5.063 18 C -0.132 4.132 19 C -0.214 4.214 20 C -0.217 4.217 21 C -0.120 4.120 22 C -0.157 4.157 23 O -0.341 6.341 24 Si 0.618 3.382 25 C -0.133 4.133 26 C -0.109 4.109 27 C -0.174 4.174 28 H 0.130 0.870 29 H 0.131 0.869 30 H 0.091 0.909 31 H 0.115 0.885 32 H 0.236 0.764 33 H 0.125 0.875 34 H 0.124 0.876 35 H 0.144 0.856 36 H 0.140 0.860 37 H 0.181 0.819 38 H 0.159 0.841 39 H 0.160 0.840 40 H 0.128 0.872 41 H 0.223 0.777 42 H -0.178 1.178 43 H -0.179 1.179 44 H 0.146 0.854 45 H 0.146 0.854 46 H 0.121 0.879 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.572 -2.021 -3.942 5.122 hybrid contribution 0.016 0.494 -0.428 0.654 sum 2.588 -1.527 -4.370 5.303 Atomic orbital electron populations 1.81297 1.13160 1.08196 1.08514 1.29225 0.95346 0.93581 0.93413 1.19345 0.81676 1.01315 1.03427 1.22673 0.96703 0.98220 0.95367 0.88441 1.23635 0.98406 1.01327 0.95542 1.21796 0.98695 0.81554 0.96570 0.87636 1.45703 1.64523 1.10017 1.16690 1.20590 0.77538 0.90069 0.81477 1.90767 1.42421 1.59361 1.47378 1.20687 1.04298 0.93687 0.95639 1.19250 0.94008 0.99424 0.93682 1.20797 0.99671 0.98795 0.91400 1.20882 0.94294 0.98519 0.97588 1.17588 0.93779 1.01807 0.82563 1.41424 1.24815 1.30062 1.09975 1.22019 0.93715 1.02650 0.94799 1.20916 1.02365 1.01373 0.96744 1.20772 0.99042 1.04152 0.97725 1.21019 1.01131 0.98151 0.91734 1.24791 0.96070 1.02885 0.91934 1.86510 1.51442 1.69900 1.26259 0.94102 0.87094 0.79702 0.77334 1.20988 0.99710 1.01179 0.91443 1.20797 0.94813 0.98771 0.96486 1.23369 0.95006 1.03577 0.95485 0.87039 0.86901 0.90866 0.88471 0.76372 0.87483 0.87603 0.85636 0.86026 0.81871 0.84058 0.84039 0.87224 0.77676 1.17835 1.17922 0.85375 0.85413 0.87851 0.90159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -1.73 18.54 42.16 0.78 -0.95 16 2 C 0.20 -0.05 15.42 -20.76 -0.32 -0.37 16 3 C -0.02 0.09 5.54 -29.52 -0.16 -0.07 16 4 C -0.11 0.55 3.51 -89.67 -0.31 0.24 16 5 H 0.10 -0.47 8.12 -51.93 -0.42 -0.90 16 6 C -0.15 0.48 7.45 -25.77 -0.19 0.28 16 7 C 0.12 -0.34 4.30 -67.12 -0.29 -0.63 16 8 H 0.11 -0.09 7.50 -51.93 -0.39 -0.48 16 9 N -0.72 2.13 5.26 -53.01 -0.28 1.85 16 10 C 0.52 -0.09 7.82 -10.98 -0.09 -0.18 16 11 O -0.52 -2.34 15.65 5.55 0.09 -2.26 16 12 C -0.10 0.25 5.83 -29.03 -0.17 0.08 16 13 C -0.06 -0.03 4.37 -104.59 -0.46 -0.48 16 14 C -0.09 -0.13 9.69 -39.61 -0.38 -0.51 16 15 C -0.09 -0.24 8.62 -39.40 -0.34 -0.58 16 16 C 0.13 0.32 4.67 -83.59 -0.39 -0.07 16 17 N -0.39 -1.03 2.84 -56.73 -0.16 -1.20 16 18 C 0.00 -0.01 11.21 -16.65 -0.19 -0.20 16 19 C -0.19 -0.41 10.86 -39.76 -0.43 -0.84 16 20 C -0.19 -0.41 9.39 -39.76 -0.37 -0.79 16 21 C -0.01 -0.02 6.12 -81.68 -0.50 -0.52 16 22 C -0.05 -0.03 2.49 36.01 0.09 0.06 16 23 O -0.54 -0.37 11.01 -35.23 -0.39 -0.75 16 24 Si 0.72 -0.47 30.94 -169.99 -5.26 -5.72 16 25 C -0.11 -0.14 9.76 -39.41 -0.38 -0.52 16 26 C -0.09 -0.04 9.69 -39.61 -0.38 -0.42 16 27 C -0.14 0.76 7.38 -25.92 -0.19 0.57 16 28 H 0.11 -0.74 7.85 -51.93 -0.41 -1.15 16 29 H 0.11 -0.80 8.14 -51.93 -0.42 -1.22 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.10 -0.36 7.90 -51.93 -0.41 -0.77 16 32 H 0.40 -2.27 8.70 -40.82 -0.36 -2.62 16 33 H 0.11 -0.50 8.08 -51.93 -0.42 -0.92 16 34 H 0.11 -0.44 8.08 -51.93 -0.42 -0.86 16 35 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 36 H 0.12 0.31 8.06 -52.49 -0.42 -0.11 16 37 H 0.16 0.09 8.06 -52.49 -0.42 -0.33 16 38 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 39 H 0.14 0.13 6.43 -52.48 -0.34 -0.21 16 40 H 0.11 0.13 7.96 -51.93 -0.41 -0.28 16 41 H 0.38 -0.89 8.60 45.56 0.39 -0.50 16 42 H -0.25 -0.41 6.86 56.52 0.39 -0.02 16 43 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 44 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 45 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 46 H 0.10 -0.68 8.10 -51.93 -0.42 -1.10 16 47 H 0.08 -0.48 8.14 -51.93 -0.42 -0.90 16 LS Contribution 402.44 15.07 6.06 6.06 Total: 0.00 -11.50 402.44 -11.24 -22.74 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -6.62 Total: -14.82 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -5.47 Total: -4.95 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: 0.34 Total: -0.29 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.30 Total: -3.01 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.26 Total: -5.72 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -11.50 -11.24 -22.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13287746.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.988 kcal (2) G-P(sol) polarization free energy of solvation -11.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds