Wall clock time and date at job start Sun Mar 7 2021 06:08:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36416 * 125.80153 * 2 1 4 4 C 1.47375 * 127.19415 * 0.05057 * 3 2 1 5 5 O 1.21617 * 119.99766 * 359.97438 * 4 3 2 6 6 N 1.34774 * 120.00591 * 179.97438 * 4 3 2 7 7 C 1.46498 * 120.00636 * 179.97438 * 6 4 3 8 8 H 1.09009 * 112.84496 * 23.80195 * 7 6 4 9 9 C 1.53776 * 113.61954 * 155.00146 * 7 6 4 10 10 C 1.53776 * 87.08370 * 89.11721 * 9 7 6 11 11 H 1.09001 * 113.61794 * 270.88769 * 10 9 7 12 12 C 1.52999 * 113.61598 * 139.98286 * 10 9 7 13 13 C 1.47200 * 109.47161 * 175.00084 * 12 10 9 14 14 N 9.14589 * 116.36335 * 334.51449 * 2 1 3 15 15 C 1.53776 * 87.08230 * 25.43395 * 10 9 7 16 16 C 1.47026 * 105.61875 * 180.02562 * 3 2 1 17 17 C 1.34185 * 105.94931 * 0.02562 * 16 3 2 18 18 C 1.50700 * 125.43527 * 179.97438 * 17 16 3 19 19 O 1.42905 * 109.47251 * 300.00064 * 18 17 16 20 20 Si 1.86295 * 109.47250 * 180.02562 * 18 17 16 21 21 O 1.33659 * 125.80371 * 180.02562 * 2 1 3 22 22 H 1.09004 * 109.47359 * 89.99714 * 1 2 3 23 23 H 1.09002 * 109.46592 * 209.99464 * 1 2 3 24 24 H 1.08998 * 109.46838 * 329.99224 * 1 2 3 25 25 H 0.97009 * 119.99726 * 359.97438 * 6 4 3 26 26 H 1.09000 * 113.61723 * 203.66618 * 9 7 6 27 27 H 1.09008 * 113.61112 * 334.48257 * 9 7 6 28 28 H 1.08996 * 109.46813 * 295.00303 * 12 10 9 29 29 H 1.09006 * 109.46700 * 55.00356 * 12 10 9 30 30 H 1.09006 * 113.61896 * 220.02227 * 15 10 9 31 31 H 1.09000 * 113.61763 * 89.11057 * 15 10 9 32 32 H 1.07999 * 127.02436 * 179.74046 * 16 3 2 33 33 H 1.09006 * 109.47194 * 59.99671 * 18 17 16 34 34 H 0.96693 * 113.99693 * 300.00230 * 19 18 17 35 35 H 1.48499 * 110.00210 * 58.67905 * 20 18 17 36 36 H 1.48499 * 110.00117 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 0.0010 5 8 0.6890 2.7892 0.0016 6 7 2.7930 3.5016 0.0014 7 6 2.3646 4.9025 0.0019 8 1 1.3618 5.0383 0.4073 9 6 3.4055 5.8649 0.5976 10 6 3.9877 5.9880 -0.8203 11 1 4.7503 5.2424 -1.0455 12 6 4.4193 7.4099 -1.1844 13 6 5.0691 7.4025 -2.5052 14 7 5.5683 7.3973 -3.5260 15 6 2.5897 5.6160 -1.3417 16 6 3.6850 0.5991 -0.0006 17 6 3.5859 -0.7391 -0.0015 18 6 4.7459 -1.7010 -0.0030 19 8 5.5419 -1.4858 -1.1701 20 14 4.1028 -3.4494 -0.0046 21 8 2.2889 -1.0840 -0.0005 22 1 -0.3634 0.0001 -1.0277 23 1 -0.3632 -0.8901 0.5138 24 1 -0.3633 0.8899 0.5140 25 1 3.7382 3.2835 0.0014 26 1 2.9763 6.7929 0.9755 27 1 4.0817 5.3907 1.3092 28 1 3.5441 8.0589 -1.2136 29 1 5.1209 7.7794 -0.4364 30 1 2.6080 4.9405 -2.1971 31 1 1.9374 6.4759 -1.4940 32 1 4.5928 1.1841 -0.0047 33 1 5.3543 -1.5381 0.8867 34 1 5.0641 -1.6136 -2.0010 35 1 3.2462 -3.6745 -1.1966 36 1 5.2370 -4.4079 -0.0054 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_13308374.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:00 Heat of formation + Delta-G solvation = -1.555927 kcal Electronic energy + Delta-G solvation = -20862.440164 eV Core-core repulsion = 17508.921257 eV Total energy + Delta-G solvation = -3353.518906 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 277.115 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -43.76552 -41.30823 -39.48499 -38.23386 -37.39902 -34.78378 -33.99140 -33.11764 -31.25597 -29.41461 -26.89311 -26.16420 -24.93079 -23.82532 -22.34183 -20.86183 -20.28923 -19.12177 -18.66735 -17.97866 -17.72318 -17.05990 -16.82464 -16.26561 -16.16224 -15.98355 -15.80937 -15.41315 -14.95718 -14.60672 -14.25321 -14.10057 -14.01738 -13.96464 -13.87796 -13.66952 -13.61082 -13.19322 -12.99396 -12.86751 -12.56882 -12.14256 -12.11935 -11.66256 -11.36404 -11.10439 -10.91316 -10.75904 -10.11845 -9.58439 -5.03456 0.27736 0.79719 1.08725 1.39744 1.65773 1.79788 1.84366 1.87460 2.08981 2.31221 2.88760 3.04718 3.28505 3.30986 3.43689 3.64206 3.70502 3.74051 3.75692 4.07785 4.10077 4.24105 4.33772 4.38302 4.42466 4.52918 4.55855 4.57210 4.60411 4.70857 4.80468 4.88818 4.90270 5.01679 5.10700 5.19161 5.51514 5.87378 6.16150 6.45125 6.61880 7.20252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.255 4.255 4 C 0.597 3.403 5 O -0.537 6.537 6 N -0.708 5.708 7 C 0.121 3.879 8 H 0.109 0.891 9 C -0.137 4.137 10 C -0.111 4.111 11 H 0.097 0.903 12 C -0.017 4.017 13 C 0.202 3.798 14 N -0.435 5.435 15 C -0.150 4.150 16 C -0.149 4.149 17 C -0.054 4.054 18 C -0.035 4.035 19 O -0.521 6.521 20 Si 0.702 3.298 21 O -0.168 6.168 22 H 0.091 0.909 23 H 0.083 0.917 24 H 0.112 0.888 25 H 0.401 0.599 26 H 0.104 0.896 27 H 0.080 0.920 28 H 0.112 0.888 29 H 0.113 0.887 30 H 0.073 0.927 31 H 0.098 0.902 32 H 0.158 0.842 33 H 0.138 0.862 34 H 0.381 0.619 35 H -0.256 1.256 36 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.953 -0.347 5.745 5.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.359 5.359 7 C 0.015 3.985 8 H 0.127 0.873 9 C -0.175 4.175 10 C -0.131 4.131 11 H 0.115 0.885 12 C -0.057 4.057 13 C -0.116 4.116 14 N -0.112 5.112 15 C -0.189 4.189 16 C -0.168 4.168 17 C -0.102 4.102 18 C -0.144 4.144 19 O -0.327 6.327 20 Si 0.601 3.399 21 O -0.065 6.065 22 H 0.110 0.890 23 H 0.102 0.898 24 H 0.130 0.870 25 H 0.236 0.764 26 H 0.123 0.877 27 H 0.098 0.902 28 H 0.130 0.870 29 H 0.131 0.869 30 H 0.092 0.908 31 H 0.117 0.883 32 H 0.175 0.825 33 H 0.155 0.845 34 H 0.229 0.771 35 H -0.180 1.180 36 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -0.704 -1.093 4.224 4.420 hybrid contribution 0.728 0.666 -0.785 1.261 sum 0.024 -0.427 3.438 3.465 Atomic orbital electron populations 1.20713 0.83286 1.05556 1.04763 1.22935 0.94090 0.82835 0.95767 1.21096 0.93239 0.93746 1.17832 1.17145 0.85370 0.83659 0.75288 1.90782 1.16490 1.83952 1.50281 1.45438 1.09679 1.05148 1.75618 1.21809 0.99876 0.79833 0.96952 0.87311 1.23385 0.98021 1.00302 0.95769 1.22628 0.97660 0.95437 0.97327 0.88517 1.19343 1.00919 0.98851 0.86573 1.29247 0.93740 0.93567 0.95018 1.81309 1.09628 1.08094 1.12160 1.23598 0.96005 1.01220 0.98085 1.22573 0.96431 0.93516 1.04297 1.22557 0.82934 0.95564 1.09164 1.24347 0.90303 1.07675 0.92076 1.86664 1.38700 1.91718 1.15668 0.94381 0.81855 0.73686 0.89997 1.83682 1.16357 1.35041 1.71371 0.89021 0.89838 0.87013 0.76377 0.87738 0.90172 0.87001 0.86912 0.90848 0.88344 0.82464 0.84479 0.77069 1.18022 1.17252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.05 9.89 36.01 0.36 0.41 16 2 C 0.10 0.11 7.37 -34.97 -0.26 -0.15 16 3 C -0.25 -0.33 6.31 -103.28 -0.65 -0.98 16 4 C 0.60 1.11 7.81 -12.54 -0.10 1.02 16 5 O -0.54 -2.47 14.44 5.26 0.08 -2.39 16 6 N -0.71 0.80 5.26 -54.10 -0.28 0.51 16 7 C 0.12 -0.26 4.32 -67.12 -0.29 -0.55 16 8 H 0.11 -0.07 7.46 -51.92 -0.39 -0.46 16 9 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 10 C -0.11 0.48 3.49 -89.81 -0.31 0.17 16 11 H 0.10 -0.38 8.12 -51.93 -0.42 -0.80 16 12 C -0.02 0.08 5.54 -29.52 -0.16 -0.08 16 13 C 0.20 0.04 15.42 -20.75 -0.32 -0.28 16 14 N -0.44 -1.91 18.54 42.17 0.78 -1.12 16 15 C -0.15 0.40 7.43 -25.92 -0.19 0.21 16 16 C -0.15 0.02 10.46 -37.45 -0.39 -0.37 16 17 C -0.05 0.00 6.20 -35.74 -0.22 -0.22 16 18 C -0.03 0.05 2.98 36.01 0.11 0.15 16 19 O -0.52 0.12 12.86 -35.23 -0.45 -0.34 16 20 Si 0.70 -1.01 32.08 -169.99 -5.45 -6.46 16 21 O -0.17 -0.13 8.89 7.65 0.07 -0.06 16 22 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 23 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 24 H 0.11 0.05 6.48 -51.93 -0.34 -0.28 16 25 H 0.40 -1.23 7.87 -40.82 -0.32 -1.55 16 26 H 0.10 -0.65 8.10 -51.93 -0.42 -1.07 16 27 H 0.08 -0.41 8.14 -51.92 -0.42 -0.83 16 28 H 0.11 -0.72 7.84 -51.93 -0.41 -1.13 16 29 H 0.11 -0.75 8.14 -51.93 -0.42 -1.18 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.10 -0.36 7.90 -51.93 -0.41 -0.77 16 32 H 0.16 -0.33 7.74 -52.49 -0.41 -0.74 16 33 H 0.14 -0.41 7.96 -51.93 -0.41 -0.82 16 34 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 35 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 36 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 LS Contribution 319.79 15.07 4.82 4.82 Total: 0.00 -9.42 319.79 -7.52 -16.94 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -4.44 Total: -11.69 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -2.63 Total: -0.20 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: 0.50 Total: -0.61 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -0.31 Total: -2.79 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.45 Total: -6.46 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -9.42 -7.52 -16.94 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13308374.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.380 kcal (2) G-P(sol) polarization free energy of solvation -9.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds