Wall clock time and date at job start Sun Mar 7 2021 06:08:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 C 1.53005 * 109.46905 * 159.87224 * 3 2 1 5 5 H 1.08995 * 112.84826 * 43.80082 * 4 3 2 6 6 C 1.54057 * 113.61764 * 272.49519 * 4 3 2 7 7 C 1.53782 * 86.98318 * 220.01939 * 6 4 3 8 8 H 1.09006 * 113.60916 * 140.01736 * 7 6 4 9 9 N 1.46500 * 113.61502 * 270.83693 * 7 6 4 10 10 C 1.34771 * 119.99931 * 254.13501 * 9 7 6 11 11 O 1.21592 * 120.00029 * 0.02562 * 10 9 7 12 12 C 1.47536 * 119.99791 * 180.02562 * 10 9 7 13 13 C 1.39667 * 120.19418 * 359.97438 * 12 10 9 14 14 C 1.37825 * 119.90904 * 180.02562 * 13 12 10 15 15 C 1.38501 * 120.30104 * 359.97438 * 14 13 12 16 16 C 1.50706 * 119.80695 * 180.02562 * 15 14 13 17 17 O 1.42893 * 109.47276 * 245.00133 * 16 15 14 18 18 Si 1.86301 * 109.46651 * 5.00088 * 16 15 14 19 19 C 1.38099 * 120.39150 * 0.04528 * 15 14 13 20 20 C 1.38667 * 120.08093 * 359.95370 * 19 15 14 21 21 O 1.35658 * 120.15006 * 180.29424 * 20 19 15 22 22 C 1.53782 * 113.61314 * 175.00113 * 4 3 2 23 23 H 1.08994 * 109.47475 * 39.87145 * 3 2 1 24 24 H 1.09001 * 109.47062 * 279.87094 * 3 2 1 25 25 H 1.09002 * 113.69357 * 105.50585 * 6 4 3 26 26 H 1.09004 * 113.61021 * 334.52522 * 6 4 3 27 27 H 0.96994 * 119.99645 * 74.14272 * 9 7 6 28 28 H 1.08005 * 120.04268 * 359.97438 * 13 12 10 29 29 H 1.08004 * 119.84813 * 179.97438 * 14 13 12 30 30 H 1.08997 * 109.46654 * 124.99832 * 16 15 14 31 31 H 0.96706 * 114.00241 * 59.99561 * 17 16 15 32 32 H 1.48506 * 109.99476 * 179.97438 * 18 16 15 33 33 H 1.48497 * 110.00362 * 301.31677 * 18 16 15 34 34 H 1.07996 * 119.95988 * 180.02562 * 19 15 14 35 35 H 0.96693 * 114.00154 * 269.72957 * 21 20 19 36 36 H 1.08994 * 113.61740 * 25.43096 * 22 4 3 37 37 H 1.09006 * 113.61244 * 254.52559 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1174 1.3554 -0.4964 5 1 2.5746 2.1959 -0.0641 6 6 3.2651 1.4358 -2.0278 7 6 4.5657 2.2180 -1.7798 8 1 5.3729 1.9504 -2.4617 9 7 4.3683 3.6657 -1.6721 10 6 4.7402 4.4737 -2.6846 11 8 5.2391 4.0011 -3.6877 12 6 4.5419 5.9316 -2.5758 13 6 3.9687 6.4787 -1.4257 14 6 3.7858 7.8414 -1.3305 15 6 4.1683 8.6721 -2.3706 16 6 3.9636 10.1607 -2.2545 17 8 3.0157 10.5890 -3.2342 18 14 3.3251 10.5687 -0.5526 19 6 4.7359 8.1445 -3.5137 20 6 4.9274 6.7757 -3.6264 21 8 5.4903 6.2564 -4.7462 22 6 4.6461 1.5043 -0.4200 23 1 2.9718 -0.7878 -0.6587 24 1 2.9714 -0.1754 1.0125 25 1 2.4868 2.0251 -2.5126 26 1 3.4219 0.4672 -2.5027 27 1 3.9701 4.0426 -0.8720 28 1 3.6685 5.8346 -0.6123 29 1 3.3420 8.2634 -0.4409 30 1 4.9122 10.6717 -2.4190 31 1 2.1465 10.1739 -3.1484 32 1 3.1197 12.0340 -0.4251 33 1 2.0481 9.8528 -0.3039 34 1 5.0320 8.7987 -4.3203 35 1 4.8526 6.0200 -5.4336 36 1 5.1797 0.5546 -0.4562 37 1 4.9819 2.1490 0.3923 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:05 Heat of formation + Delta-G solvation = -24.720789 kcal Electronic energy + Delta-G solvation = -22085.454746 eV Core-core repulsion = 18602.705196 eV Total energy + Delta-G solvation = -3482.749551 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.83579 -40.85383 -39.35717 -38.42047 -37.41541 -37.25698 -34.74867 -32.87511 -31.16708 -31.11291 -27.63141 -26.92658 -24.83481 -24.01374 -23.40468 -21.84382 -20.49344 -19.51326 -18.99130 -18.48063 -18.32597 -17.38086 -16.74065 -16.63682 -16.47834 -16.22931 -15.97391 -15.90326 -15.61913 -15.21134 -15.02854 -14.73773 -14.33136 -14.06591 -13.79173 -13.74303 -13.64661 -13.31914 -13.16726 -13.03585 -12.58956 -12.44115 -12.18170 -12.12452 -11.71272 -11.64854 -11.38488 -10.92144 -10.68788 -10.24250 -10.08606 -9.84719 -5.08209 -0.46170 0.05513 1.12431 1.46317 1.70417 1.77180 1.81818 1.85182 1.95726 2.52088 2.85819 3.03165 3.23316 3.26388 3.37259 3.40589 3.54377 3.63220 3.67135 3.69962 3.93458 4.04407 4.15351 4.30418 4.31509 4.39819 4.52539 4.53280 4.54866 4.64363 4.69760 4.85152 4.86374 4.91004 4.97144 5.08005 5.14869 5.45964 5.48634 6.24826 6.37449 6.59040 6.66575 7.16124 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.111 4.111 5 H 0.097 0.903 6 C -0.150 4.150 7 C 0.121 3.879 8 H 0.108 0.892 9 N -0.713 5.713 10 C 0.562 3.438 11 O -0.515 6.515 12 C -0.165 4.165 13 C -0.065 4.065 14 C -0.137 4.137 15 C -0.073 4.073 16 C -0.081 4.081 17 O -0.526 6.526 18 Si 0.691 3.309 19 C -0.128 4.128 20 C 0.173 3.827 21 O -0.476 6.476 22 C -0.136 4.136 23 H 0.112 0.888 24 H 0.113 0.887 25 H 0.073 0.927 26 H 0.098 0.902 27 H 0.399 0.601 28 H 0.133 0.867 29 H 0.136 0.864 30 H 0.123 0.877 31 H 0.377 0.623 32 H -0.255 1.255 33 H -0.258 1.258 34 H 0.141 0.859 35 H 0.398 0.602 36 H 0.105 0.895 37 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.529 -0.416 4.831 5.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.130 4.130 5 H 0.115 0.885 6 C -0.189 4.189 7 C 0.015 3.985 8 H 0.126 0.874 9 N -0.365 5.365 10 C 0.349 3.651 11 O -0.390 6.390 12 C -0.168 4.168 13 C -0.084 4.084 14 C -0.155 4.155 15 C -0.074 4.074 16 C -0.191 4.191 17 O -0.332 6.332 18 Si 0.592 3.408 19 C -0.147 4.147 20 C 0.127 3.873 21 O -0.287 6.287 22 C -0.174 4.174 23 H 0.130 0.870 24 H 0.131 0.869 25 H 0.091 0.909 26 H 0.117 0.883 27 H 0.235 0.765 28 H 0.151 0.849 29 H 0.154 0.846 30 H 0.141 0.859 31 H 0.225 0.775 32 H -0.180 1.180 33 H -0.183 1.183 34 H 0.158 0.842 35 H 0.257 0.743 36 H 0.123 0.877 37 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.567 0.012 4.651 4.908 hybrid contribution -1.090 -0.141 -0.664 1.284 sum 0.477 -0.129 3.987 4.018 Atomic orbital electron populations 1.81294 1.13168 1.08106 1.08628 1.29231 0.95353 0.93582 0.93391 1.19346 0.81655 0.99512 1.05220 1.22683 0.96745 0.96491 0.97125 0.88507 1.23643 0.98353 1.01609 0.95264 1.21808 0.98803 0.79271 0.98611 0.87410 1.45582 1.64345 1.06499 1.20096 1.18032 0.78020 0.85803 0.83216 1.90843 1.42182 1.76361 1.29613 1.20405 1.05686 0.93436 0.97301 1.21134 0.95925 0.95211 0.96090 1.20998 1.02200 0.93439 0.98859 1.20383 0.96887 0.96324 0.93819 1.25160 0.97625 0.91950 1.04346 1.86638 1.24711 1.68981 1.52909 0.94879 0.85601 0.81167 0.79202 1.21357 0.99967 0.94222 0.99154 1.18505 0.90993 0.90170 0.87669 1.84761 1.35430 1.83116 1.25415 1.23380 0.94969 1.01926 0.97152 0.87002 0.86887 0.90854 0.88344 0.76501 0.84889 0.84637 0.85899 0.77526 1.17970 1.18322 0.84163 0.74328 0.87703 0.90119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -1.66 18.54 42.15 0.78 -0.88 16 2 C 0.20 -0.08 15.42 -20.76 -0.32 -0.40 16 3 C -0.02 0.09 5.54 -29.51 -0.16 -0.07 16 4 C -0.11 0.56 3.51 -89.66 -0.31 0.25 16 5 H 0.10 -0.48 8.12 -51.93 -0.42 -0.90 16 6 C -0.15 0.48 7.45 -25.77 -0.19 0.29 16 7 C 0.12 -0.32 4.29 -67.12 -0.29 -0.60 16 8 H 0.11 -0.07 7.50 -51.93 -0.39 -0.46 16 9 N -0.71 1.43 5.21 -54.05 -0.28 1.15 16 10 C 0.56 0.80 7.76 -12.47 -0.10 0.71 16 11 O -0.51 -2.65 14.78 -16.59 -0.25 -2.90 16 12 C -0.16 -0.06 5.89 -104.85 -0.62 -0.67 16 13 C -0.06 0.15 9.54 -39.20 -0.37 -0.22 16 14 C -0.14 0.32 8.64 -39.64 -0.34 -0.02 16 15 C -0.07 0.09 5.36 -104.57 -0.56 -0.47 16 16 C -0.08 0.13 2.79 36.01 0.10 0.23 16 17 O -0.53 0.00 12.83 -35.23 -0.45 -0.45 16 18 Si 0.69 -1.68 29.86 -169.99 -5.08 -6.75 16 19 C -0.13 -0.02 9.60 -39.47 -0.38 -0.40 16 20 C 0.17 0.22 6.72 -38.70 -0.26 -0.04 16 21 O -0.48 -1.10 11.58 -40.55 -0.47 -1.57 16 22 C -0.14 0.75 7.38 -25.92 -0.19 0.56 16 23 H 0.11 -0.77 7.85 -51.93 -0.41 -1.17 16 24 H 0.11 -0.82 8.14 -51.93 -0.42 -1.24 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.10 -0.39 7.90 -51.93 -0.41 -0.80 16 27 H 0.40 -1.84 6.73 -40.82 -0.27 -2.12 16 28 H 0.13 -0.71 6.40 -52.48 -0.34 -1.05 16 29 H 0.14 -0.57 4.81 -52.48 -0.25 -0.83 16 30 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 31 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 32 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 33 H -0.26 0.21 7.00 56.52 0.40 0.61 16 34 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 35 H 0.40 -0.49 9.06 45.56 0.41 -0.08 16 36 H 0.10 -0.69 8.10 -51.93 -0.42 -1.11 16 37 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 LS Contribution 322.41 15.07 4.86 4.86 Total: 0.00 -11.40 322.41 -8.29 -19.69 By element: Atomic # 1 Polarization: -8.88 SS G_CDS: -3.41 Total: -12.29 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -4.00 Total: -0.86 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: 0.50 Total: 0.27 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -1.17 Total: -4.91 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.08 Total: -6.75 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -11.40 -8.29 -19.69 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.031 kcal (2) G-P(sol) polarization free energy of solvation -11.396 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.721 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds