Wall clock time and date at job start Sun Mar 7 2021 06:08:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35996 * 117.00135 * 2 1 4 4 C 1.38559 * 120.06421 * 0.23799 * 3 2 1 5 5 C 1.38278 * 120.01978 * 180.27391 * 4 3 2 6 6 C 1.50698 * 119.92467 * 179.74299 * 5 4 3 7 7 O 1.42901 * 109.46949 * 65.02149 * 6 5 4 8 8 Si 1.86292 * 109.47067 * 185.02048 * 6 5 4 9 9 C 1.38217 * 120.15128 * 359.76496 * 5 4 3 10 10 C 1.38376 * 120.13237 * 359.97438 * 9 5 4 11 11 Cl 1.73598 * 120.00866 * 180.02562 * 10 9 5 12 12 C 1.38624 * 119.98273 * 0.02562 * 10 9 5 13 13 O 1.36010 * 120.07846 * 180.02562 * 12 10 9 14 14 C 1.42905 * 117.00189 * 90.00061 * 13 12 10 15 15 C 1.53000 * 109.47224 * 89.99622 * 14 13 12 16 16 C 1.50694 * 109.47179 * 210.00005 * 14 13 12 17 17 O 1.21283 * 120.00363 * 359.97438 * 16 14 13 18 18 N 1.34784 * 119.99988 * 179.97438 * 16 14 13 19 19 C 1.46493 * 119.99864 * 179.72721 * 18 16 14 20 20 H 1.08998 * 112.85495 * 25.32884 * 19 18 16 21 21 C 1.53787 * 113.61479 * 156.52932 * 19 18 16 22 22 C 1.53784 * 87.08067 * 89.11450 * 21 19 18 23 23 H 1.09004 * 113.61163 * 270.80450 * 22 21 19 24 24 C 1.52992 * 113.61317 * 139.98609 * 22 21 19 25 25 C 1.47202 * 109.47244 * 175.00167 * 24 22 21 26 26 N 9.09631 * 106.54369 * 326.30631 * 13 1 2 27 27 C 1.53782 * 113.61314 * 254.13138 * 19 18 16 28 28 H 1.08999 * 109.46651 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.46736 * 299.99762 * 1 2 3 30 30 H 1.08997 * 109.47309 * 59.99717 * 1 2 3 31 31 H 1.08003 * 119.98826 * 0.02562 * 4 3 2 32 32 H 1.09001 * 109.46688 * 305.02377 * 6 5 4 33 33 H 0.96692 * 114.00398 * 59.99878 * 7 6 5 34 34 H 1.48503 * 110.00195 * 58.68445 * 8 6 5 35 35 H 1.48505 * 110.00013 * 179.97438 * 8 6 5 36 36 H 1.08000 * 119.92890 * 179.97438 * 9 5 4 37 37 H 1.09002 * 109.46814 * 329.99768 * 14 13 12 38 38 H 1.08995 * 109.47131 * 180.02562 * 15 14 13 39 39 H 1.08998 * 109.47544 * 300.00656 * 15 14 13 40 40 H 1.09007 * 109.46721 * 60.00565 * 15 14 13 41 41 H 0.97000 * 119.99339 * 0.02562 * 18 16 14 42 42 H 1.08997 * 113.61123 * 203.66007 * 21 19 18 43 43 H 1.09002 * 113.61306 * 334.48185 * 21 19 18 44 44 H 1.09010 * 109.47037 * 294.99264 * 24 22 21 45 45 H 1.08991 * 109.47660 * 54.99723 * 24 22 21 46 46 H 1.08999 * 113.61160 * 25.43919 * 27 19 18 47 47 H 1.09006 * 113.61519 * 156.33488 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2932 2.3746 0.0050 5 6 1.9219 3.6062 -0.0007 6 6 1.1005 4.8696 -0.0012 7 8 0.3684 4.9622 1.2226 8 14 2.2283 6.3435 -0.1631 9 6 3.3020 3.6811 -0.0065 10 6 4.0605 2.5237 -0.0061 11 17 5.7937 2.6215 -0.0127 12 6 3.4359 1.2862 -0.0004 13 8 4.1796 0.1473 0.0006 14 6 4.5384 -0.3921 1.2743 15 6 3.4587 -1.3732 1.7352 16 6 5.8569 -1.1130 1.1611 17 8 6.4325 -1.1606 0.0946 18 7 6.3967 -1.7049 2.2451 19 6 7.6755 -2.4107 2.1337 20 1 8.2917 -2.0434 1.3130 21 6 8.4323 -2.5287 3.4673 22 6 7.6662 -3.8424 3.6955 23 1 6.7127 -3.7087 4.2066 24 6 8.5209 -4.9510 4.3129 25 6 7.6744 -6.1202 4.6015 26 7 7.0237 -7.0313 4.8090 27 6 7.5385 -3.9421 2.1636 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 0.2146 2.3191 0.0093 32 1 0.4048 4.8504 -0.8401 33 1 0.9248 4.9839 2.0131 34 1 3.0185 6.2431 -1.4165 35 1 1.4302 7.5959 -0.1654 36 1 3.7893 4.6449 -0.0114 37 1 4.6277 0.4168 1.9994 38 1 3.7322 -1.7844 2.7069 39 1 2.5050 -0.8519 1.8170 40 1 3.3695 -2.1823 1.0101 41 1 5.9361 -1.6671 3.0980 42 1 9.5071 -2.6650 3.3487 43 1 8.1812 -1.7454 4.1825 44 1 9.3072 -5.2356 3.6136 45 1 8.9704 -4.5906 5.2380 46 1 6.5653 -4.3000 1.8274 47 1 8.3695 -4.4642 1.6892 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_13428712.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:12 Heat of formation + Delta-G solvation = -60.229150 kcal Electronic energy + Delta-G solvation = -32808.755830 eV Core-core repulsion = 28179.371679 eV Total energy + Delta-G solvation = -4629.384150 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.122 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.00880 -41.31426 -39.94588 -39.23003 -38.81371 -37.76637 -37.39047 -36.87575 -34.85416 -33.05853 -31.56260 -31.36043 -30.69234 -28.55174 -26.72460 -26.58115 -25.77182 -24.16080 -23.60160 -22.81087 -21.78131 -20.28097 -19.68222 -18.90461 -18.63883 -18.37404 -18.16344 -17.53191 -17.20251 -16.83733 -16.43815 -16.24863 -16.16167 -15.94726 -15.87072 -15.70671 -15.59454 -15.45121 -14.80700 -14.72070 -14.43830 -14.27974 -14.00667 -13.99854 -13.75178 -13.60904 -13.39697 -13.27724 -13.20039 -13.05592 -12.91043 -12.72428 -12.56457 -12.44397 -12.31148 -12.16997 -11.89819 -11.84227 -11.82759 -11.43718 -11.35258 -11.07687 -10.72802 -10.53327 -10.05693 -9.86509 -9.41604 -5.02589 -0.34535 -0.02714 0.86560 1.24640 1.48089 1.62088 1.68271 1.83851 1.88574 1.94886 2.16060 2.22558 2.69766 3.10950 3.34118 3.56260 3.56650 3.60168 3.72030 3.75545 3.81505 3.84549 3.93352 3.98361 4.01016 4.02622 4.04706 4.29319 4.34120 4.43628 4.45067 4.57503 4.68014 4.68811 4.71676 4.74031 4.80339 4.83757 4.89847 4.95948 4.99643 5.08125 5.14470 5.16299 5.22244 5.23067 5.30787 5.67072 5.92165 6.32714 6.51038 6.69948 6.74306 7.18702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.313 6.313 3 C 0.125 3.875 4 C -0.164 4.164 5 C -0.064 4.064 6 C -0.063 4.063 7 O -0.546 6.546 8 Si 0.761 3.239 9 C -0.133 4.133 10 C -0.023 4.023 11 Cl -0.047 7.047 12 C 0.054 3.946 13 O -0.309 6.309 14 C 0.073 3.927 15 C -0.161 4.161 16 C 0.518 3.482 17 O -0.561 6.561 18 N -0.696 5.696 19 C 0.106 3.894 20 H 0.082 0.918 21 C -0.114 4.114 22 C -0.099 4.099 23 H 0.100 0.900 24 C -0.015 4.015 25 C 0.233 3.767 26 N -0.519 5.519 27 C -0.156 4.156 28 H 0.117 0.883 29 H 0.074 0.926 30 H 0.063 0.937 31 H 0.159 0.841 32 H 0.120 0.880 33 H 0.398 0.602 34 H -0.288 1.288 35 H -0.291 1.291 36 H 0.158 0.842 37 H 0.107 0.893 38 H 0.099 0.901 39 H 0.080 0.920 40 H 0.054 0.946 41 H 0.416 0.584 42 H 0.123 0.877 43 H 0.094 0.906 44 H 0.135 0.865 45 H 0.146 0.854 46 H 0.050 0.950 47 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.545 4.712 7.857 9.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.226 6.226 3 C 0.078 3.922 4 C -0.183 4.183 5 C -0.065 4.065 6 C -0.174 4.174 7 O -0.355 6.355 8 Si 0.667 3.333 9 C -0.151 4.151 10 C -0.050 4.050 11 Cl -0.017 7.017 12 C 0.008 3.992 13 O -0.225 6.225 14 C 0.014 3.986 15 C -0.219 4.219 16 C 0.304 3.696 17 O -0.438 6.438 18 N -0.350 5.350 19 C 0.000 4.000 20 H 0.101 0.899 21 C -0.152 4.152 22 C -0.118 4.118 23 H 0.118 0.882 24 C -0.054 4.054 25 C -0.083 4.083 26 N -0.198 5.198 27 C -0.195 4.195 28 H 0.135 0.865 29 H 0.093 0.907 30 H 0.082 0.918 31 H 0.177 0.823 32 H 0.137 0.863 33 H 0.248 0.752 34 H -0.215 1.215 35 H -0.219 1.219 36 H 0.175 0.825 37 H 0.125 0.875 38 H 0.117 0.883 39 H 0.099 0.901 40 H 0.073 0.927 41 H 0.254 0.746 42 H 0.141 0.859 43 H 0.113 0.887 44 H 0.152 0.848 45 H 0.164 0.836 46 H 0.069 0.931 47 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 0.006 3.696 6.380 7.373 hybrid contribution -0.606 -0.188 -0.441 0.772 sum -0.600 3.508 5.939 6.923 Atomic orbital electron populations 1.23445 0.76099 1.05823 1.02681 1.86214 1.23398 1.25256 1.87766 1.19240 0.90532 0.86097 0.96305 1.21304 1.01627 0.90166 1.05224 1.20209 0.92674 0.96050 0.97575 1.25069 1.00861 1.00527 0.90948 1.86495 1.36991 1.96419 1.15554 0.93833 0.79299 0.74084 0.86107 1.20893 0.92920 0.97185 1.04109 1.21086 0.86099 0.93576 1.04236 1.98416 1.08295 1.98451 1.96578 1.17790 0.87291 0.85461 1.08621 1.86250 1.69835 1.38187 1.28249 1.22340 0.92818 0.97586 0.85808 1.22244 0.98400 0.98915 1.02310 1.20538 0.86228 0.78694 0.84180 1.90739 1.63173 1.60484 1.29404 1.45468 1.23168 1.54538 1.11798 1.21964 0.84833 0.92308 1.00859 0.89944 1.23326 1.01172 0.96298 0.94395 1.22591 0.99932 0.94691 0.94634 0.88220 1.19728 0.94798 0.84954 1.05942 1.30256 0.92922 0.94140 0.90967 1.81435 1.12504 1.13859 1.11973 1.23702 1.02766 0.96039 0.96979 0.86491 0.90711 0.91794 0.82317 0.86282 0.75155 1.21537 1.21870 0.82469 0.87522 0.88259 0.90132 0.92688 0.74607 0.85880 0.88733 0.84754 0.83637 0.93121 0.87683 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.61 8.22 -79.63 -0.65 -1.27 16 3 C 0.13 0.32 6.54 22.56 0.15 0.47 16 4 C -0.16 0.21 8.67 22.36 0.19 0.40 16 5 C -0.06 0.14 5.35 -19.86 -0.11 0.03 16 6 C -0.06 0.26 2.80 71.24 0.20 0.46 16 7 O -0.55 2.47 12.83 -148.98 -1.91 0.56 16 8 Si 0.76 -2.91 29.79 68.60 2.04 -0.87 16 9 C -0.13 0.10 8.45 22.30 0.19 0.29 16 10 C -0.02 -0.09 6.33 22.39 0.14 0.05 16 11 Cl -0.05 -0.26 28.50 -2.72 -0.08 -0.34 16 12 C 0.05 0.31 5.56 22.58 0.13 0.44 16 13 O -0.31 -2.89 8.48 -67.25 -0.57 -3.46 16 14 C 0.07 0.17 3.20 29.85 0.10 0.26 16 15 C -0.16 0.29 9.00 71.98 0.65 0.94 16 16 C 0.52 2.65 7.23 87.65 0.63 3.28 16 17 O -0.56 -8.74 16.12 16.00 0.26 -8.48 16 18 N -0.70 2.43 5.16 -440.04 -2.27 0.16 16 19 C 0.11 -0.48 4.30 45.52 0.20 -0.28 16 20 H 0.08 0.08 7.50 -2.39 -0.02 0.06 16 21 C -0.11 1.48 7.38 31.12 0.23 1.71 16 22 C -0.10 1.14 3.50 -10.18 -0.04 1.10 16 23 H 0.10 -1.14 8.12 -2.38 -0.02 -1.16 16 24 C -0.01 0.19 5.54 28.79 0.16 0.35 16 25 C 0.23 -0.22 15.43 89.41 1.38 1.16 16 26 N -0.52 -4.65 18.56 20.04 0.37 -4.28 16 27 C -0.16 0.88 7.45 31.21 0.23 1.12 16 28 H 0.12 -0.93 8.14 -2.39 -0.02 -0.94 16 29 H 0.07 -0.62 7.65 -2.39 -0.02 -0.64 16 30 H 0.06 -0.40 7.67 -2.39 -0.02 -0.42 16 31 H 0.16 -0.73 6.30 -2.91 -0.02 -0.75 16 32 H 0.12 -0.45 7.96 -2.39 -0.02 -0.47 16 33 H 0.40 -4.98 8.70 -74.06 -0.64 -5.62 16 34 H -0.29 -0.65 7.11 99.48 0.71 0.06 16 35 H -0.29 -0.93 7.11 99.48 0.71 -0.23 16 36 H 0.16 -0.70 4.89 -2.91 -0.01 -0.72 16 37 H 0.11 -0.23 7.91 -2.39 -0.02 -0.25 16 38 H 0.10 -0.81 7.57 -2.39 -0.02 -0.82 16 39 H 0.08 -0.14 6.31 -2.39 -0.02 -0.16 16 40 H 0.05 0.14 8.14 -2.38 -0.02 0.12 16 41 H 0.42 -4.24 8.12 -92.71 -0.75 -5.00 16 42 H 0.12 -1.97 8.10 -2.39 -0.02 -1.99 16 43 H 0.09 -1.39 8.14 -2.39 -0.02 -1.41 16 44 H 0.13 -2.19 7.85 -2.38 -0.02 -2.21 16 45 H 0.15 -2.65 8.14 -2.39 -0.02 -2.67 16 46 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 47 H 0.10 -0.76 7.90 -2.38 -0.02 -0.78 16 Total: 0.00 -33.62 411.67 2.42 -31.20 By element: Atomic # 1 Polarization: -25.73 SS G_CDS: -0.31 Total: -26.04 kcal Atomic # 6 Polarization: 7.27 SS G_CDS: 5.54 Total: 12.81 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -1.90 Total: -4.11 kcal Atomic # 8 Polarization: -9.77 SS G_CDS: -2.88 Total: -12.65 kcal Atomic # 14 Polarization: -2.91 SS G_CDS: 2.04 Total: -0.87 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -0.08 Total: -0.34 kcal Total: -33.62 2.42 -31.20 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13428712.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.029 kcal (2) G-P(sol) polarization free energy of solvation -33.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.200 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds