Wall clock time and date at job start Sun Mar 7 2021 06:08:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.52999 * 109.47191 * 291.04560 * 3 2 1 5 5 H 1.09007 * 112.85102 * 316.20034 * 4 3 2 6 6 C 1.53782 * 113.61420 * 185.00132 * 4 3 2 7 7 C 1.53784 * 87.07934 * 220.01888 * 6 4 3 8 8 H 1.09002 * 113.60950 * 140.06039 * 7 6 4 9 9 N 1.46499 * 113.61884 * 270.88274 * 7 6 4 10 10 C 1.34765 * 120.00218 * 203.47542 * 9 7 6 11 11 O 1.21624 * 120.00176 * 359.97438 * 10 9 7 12 12 C 1.47262 * 120.00253 * 179.97438 * 10 9 7 13 13 C 1.36332 * 126.97298 * 179.97438 * 12 10 9 14 14 C 1.51201 * 126.76311 * 0.04645 * 13 12 10 15 15 C 1.53392 * 108.15181 * 164.33767 * 14 13 12 16 16 C 1.53160 * 109.11241 * 48.44304 * 15 14 13 17 17 C 1.53126 * 109.52290 * 290.37688 * 16 15 14 18 18 N 1.35214 * 108.66529 * 180.02562 * 13 12 10 19 19 C 1.36431 * 109.89509 * 359.96069 * 18 13 12 20 20 C 1.50701 * 125.49321 * 180.02562 * 19 18 13 21 21 O 1.42910 * 109.46844 * 30.00091 * 20 19 18 22 22 Si 1.86301 * 109.47120 * 149.99963 * 20 19 18 23 23 C 1.34491 * 109.01259 * 0.03192 * 19 18 13 24 24 C 1.53781 * 87.17526 * 25.47554 * 7 6 4 25 25 H 1.09001 * 109.46811 * 171.04868 * 3 2 1 26 26 H 1.08993 * 109.46790 * 51.04736 * 3 2 1 27 27 H 1.08996 * 113.61147 * 105.47761 * 6 4 3 28 28 H 1.08998 * 113.61523 * 334.56809 * 6 4 3 29 29 H 0.97007 * 119.99406 * 23.47319 * 9 7 6 30 30 H 1.09004 * 109.80876 * 44.65117 * 14 13 12 31 31 H 1.09002 * 109.70428 * 283.97097 * 14 13 12 32 32 H 1.09002 * 109.54525 * 288.52966 * 15 14 13 33 33 H 1.08999 * 109.53833 * 168.35347 * 15 14 13 34 34 H 1.09004 * 109.46106 * 50.39644 * 16 15 14 35 35 H 1.09001 * 109.46267 * 170.36878 * 16 15 14 36 36 H 1.09004 * 109.56501 * 170.83574 * 17 16 15 37 37 H 1.09007 * 109.56464 * 291.05736 * 17 16 15 38 38 H 1.09002 * 109.47205 * 270.00235 * 20 19 18 39 39 H 0.96696 * 113.99842 * 60.00108 * 21 20 19 40 40 H 1.48497 * 109.99425 * 58.68473 * 22 20 19 41 41 H 1.48497 * 109.99814 * 180.02562 * 22 20 19 42 42 H 1.08008 * 126.81618 * 179.97438 * 23 19 18 43 43 H 1.08997 * 113.61465 * 89.06900 * 24 7 6 44 44 H 1.09000 * 113.61578 * 219.97916 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1183 -0.5171 1.3463 5 1 2.5756 -0.0986 2.1940 6 6 4.6470 -0.4423 1.4957 7 6 4.5676 -1.8135 2.1876 8 1 5.3750 -2.4906 1.9086 9 7 4.3709 -1.7291 3.6368 10 6 4.7437 -2.7542 4.4283 11 8 5.2430 -3.7496 3.9393 12 6 4.5465 -2.6692 5.8852 13 6 4.8684 -3.6151 6.8127 14 6 5.5012 -4.9627 6.5490 15 6 6.0333 -5.5094 7.8797 16 6 4.9415 -5.3827 8.9464 17 6 4.7264 -3.9050 9.2853 18 7 4.5276 -3.1539 8.0373 19 6 3.9826 -1.9079 7.9290 20 6 3.4821 -1.0690 9.0765 21 8 4.2321 -1.3760 10.2536 22 14 3.6874 0.7357 8.6624 23 6 3.9638 -1.5490 6.6330 24 6 3.2668 -2.0495 1.4021 25 1 2.9708 1.0160 -0.1599 26 1 2.9716 -0.6452 -0.7991 27 1 4.9826 0.3596 2.1532 28 1 5.1801 -0.4630 0.5453 29 1 3.9724 -0.9353 4.0268 30 1 6.3234 -4.8527 5.8418 31 1 4.7553 -5.6458 6.1428 32 1 6.9094 -4.9372 8.1849 33 1 6.3061 -6.5579 7.7601 34 1 4.0121 -5.8074 8.5670 35 1 5.2466 -5.9204 9.8441 36 1 3.8452 -3.8002 9.9184 37 1 5.6007 -3.5198 9.8102 38 1 2.4278 -1.2841 9.2511 39 1 5.1808 -1.2086 10.1702 40 1 2.9379 1.0606 7.4223 41 1 3.1981 1.5736 9.7865 42 1 3.5931 -0.6207 6.2238 43 1 3.4233 -2.5087 0.4260 44 1 2.4890 -2.5441 1.9839 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_16915396.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:30 Heat of formation + Delta-G solvation = 21.349621 kcal Electronic energy + Delta-G solvation = -26425.277233 eV Core-core repulsion = 22731.168869 eV Total energy + Delta-G solvation = -3694.108364 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.77815 -41.09342 -39.21302 -38.04418 -37.33883 -36.90396 -34.40539 -33.46323 -31.35120 -31.12177 -29.34485 -26.79555 -26.67924 -24.93963 -24.67536 -23.49030 -21.75599 -21.25810 -20.30101 -19.60284 -19.04755 -18.50990 -17.25621 -17.08037 -16.80478 -16.61825 -16.12430 -16.07326 -15.75252 -15.47926 -15.40320 -15.22653 -15.14185 -14.78098 -14.66986 -14.48735 -14.24618 -13.96816 -13.92986 -13.56286 -13.53324 -13.27530 -13.10776 -12.71064 -12.48550 -12.38304 -12.15880 -12.07027 -12.05148 -11.90594 -11.79597 -11.56092 -11.25791 -10.80968 -10.67697 -9.94724 -9.56222 -9.00955 -5.09835 0.84791 0.99076 1.34073 1.55747 1.73772 1.84679 1.88932 1.95083 2.40864 2.67960 2.95065 3.16395 3.38491 3.41936 3.50385 3.52546 3.61736 3.74181 3.76572 3.78464 3.81152 4.14641 4.16584 4.21210 4.29481 4.36222 4.38504 4.41287 4.49345 4.54379 4.64777 4.66027 4.66911 4.72342 4.78442 4.82403 4.90106 4.98142 5.00612 5.04110 5.11524 5.15087 5.21840 5.68365 5.75553 6.04608 6.20876 6.32986 6.66295 6.71418 7.49944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.203 3.797 3 C -0.017 4.017 4 C -0.111 4.111 5 H 0.096 0.904 6 C -0.137 4.137 7 C 0.123 3.877 8 H 0.106 0.894 9 N -0.713 5.713 10 C 0.598 3.402 11 O -0.546 6.546 12 C -0.235 4.235 13 C 0.122 3.878 14 C -0.055 4.055 15 C -0.129 4.129 16 C -0.140 4.140 17 C 0.108 3.892 18 N -0.426 5.426 19 C -0.010 4.010 20 C -0.045 4.045 21 O -0.544 6.544 22 Si 0.717 3.283 23 C -0.169 4.169 24 C -0.151 4.151 25 H 0.112 0.888 26 H 0.112 0.888 27 H 0.079 0.921 28 H 0.103 0.897 29 H 0.400 0.600 30 H 0.101 0.899 31 H 0.088 0.912 32 H 0.069 0.931 33 H 0.079 0.921 34 H 0.073 0.927 35 H 0.089 0.911 36 H 0.095 0.905 37 H 0.086 0.914 38 H 0.116 0.884 39 H 0.379 0.621 40 H -0.253 1.253 41 H -0.253 1.253 42 H 0.147 0.853 43 H 0.096 0.904 44 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.308 1.984 2.173 6.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.114 5.114 2 C -0.115 4.115 3 C -0.057 4.057 4 C -0.131 4.131 5 H 0.115 0.885 6 C -0.175 4.175 7 C 0.018 3.982 8 H 0.124 0.876 9 N -0.363 5.363 10 C 0.387 3.613 11 O -0.425 6.425 12 C -0.245 4.245 13 C 0.004 3.996 14 C -0.093 4.093 15 C -0.166 4.166 16 C -0.178 4.178 17 C -0.012 4.012 18 N -0.102 5.102 19 C -0.118 4.118 20 C -0.156 4.156 21 O -0.349 6.349 22 Si 0.617 3.383 23 C -0.193 4.193 24 C -0.190 4.190 25 H 0.130 0.870 26 H 0.130 0.870 27 H 0.098 0.902 28 H 0.121 0.879 29 H 0.234 0.766 30 H 0.119 0.881 31 H 0.106 0.894 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.092 0.908 35 H 0.107 0.893 36 H 0.114 0.886 37 H 0.104 0.896 38 H 0.133 0.867 39 H 0.227 0.773 40 H -0.177 1.177 41 H -0.178 1.178 42 H 0.164 0.836 43 H 0.115 0.885 44 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.991 1.729 2.273 4.907 hybrid contribution -0.369 -0.096 0.217 0.438 sum 3.622 1.633 2.490 4.689 Atomic orbital electron populations 1.81285 1.13193 1.08682 1.08194 1.29248 0.95375 0.93339 0.93512 1.19353 0.81609 1.05066 0.99694 1.22679 0.96807 0.97146 0.96437 0.88549 1.23375 0.94867 0.97298 1.01943 1.21739 0.98520 0.98198 0.79777 0.87581 1.45431 1.64576 1.20160 1.06165 1.17291 0.76678 0.82259 0.85043 1.90768 1.44733 1.31048 1.75945 1.19799 1.15312 0.97234 0.92117 1.20428 0.99415 0.96337 0.83382 1.20560 1.00986 0.89967 0.97787 1.21725 0.98037 1.02525 0.94357 1.21952 1.00565 0.94557 1.00720 1.22120 1.03771 0.91434 0.83921 1.43860 1.46561 1.13166 1.06625 1.20676 1.07152 0.87699 0.96297 1.24881 0.97677 1.09131 0.83897 1.86490 1.23738 1.89693 1.34960 0.94131 0.90879 0.73178 0.80093 1.21736 1.06617 0.99561 0.91425 1.23642 0.98666 0.95117 1.01550 0.86961 0.87041 0.90187 0.87889 0.76564 0.88083 0.89419 0.91186 0.90208 0.90788 0.89274 0.88645 0.89571 0.86678 0.77335 1.17719 1.17754 0.83594 0.88541 0.90892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -2.08 18.54 42.15 0.78 -1.30 16 2 C 0.20 0.12 15.42 -20.76 -0.32 -0.20 16 3 C -0.02 0.07 5.54 -29.52 -0.16 -0.09 16 4 C -0.11 0.42 3.51 -89.66 -0.31 0.10 16 5 H 0.10 -0.31 8.12 -51.92 -0.42 -0.73 16 6 C -0.14 0.60 7.38 -25.92 -0.19 0.41 16 7 C 0.12 -0.17 4.29 -67.12 -0.29 -0.46 16 8 H 0.11 0.02 7.50 -51.93 -0.39 -0.37 16 9 N -0.71 0.16 5.26 -54.14 -0.28 -0.12 16 10 C 0.60 1.75 7.81 -12.60 -0.10 1.65 16 11 O -0.55 -3.21 14.96 5.26 0.08 -3.13 16 12 C -0.24 -0.52 6.28 -103.48 -0.65 -1.17 16 13 C 0.12 0.22 6.57 -81.54 -0.54 -0.32 16 14 C -0.06 -0.04 5.33 -27.43 -0.15 -0.19 16 15 C -0.13 0.20 5.97 -26.45 -0.16 0.04 16 16 C -0.14 0.30 5.92 -26.58 -0.16 0.14 16 17 C 0.11 -0.18 5.32 -3.70 -0.02 -0.20 16 18 N -0.43 -0.14 3.11 -107.30 -0.33 -0.47 16 19 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 20 C -0.05 0.06 2.99 36.01 0.11 0.17 16 21 O -0.54 0.92 10.68 -35.23 -0.38 0.54 16 22 Si 0.72 -1.65 31.29 -169.99 -5.32 -6.97 16 23 C -0.17 -0.06 9.09 -37.47 -0.34 -0.40 16 24 C -0.15 0.29 7.45 -25.77 -0.19 0.09 16 25 H 0.11 -0.71 8.14 -51.93 -0.42 -1.13 16 26 H 0.11 -0.66 7.85 -51.93 -0.41 -1.07 16 27 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 28 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 29 H 0.40 -0.87 7.83 -40.82 -0.32 -1.19 16 30 H 0.10 0.19 7.41 -51.93 -0.38 -0.20 16 31 H 0.09 0.12 8.14 -51.93 -0.42 -0.31 16 32 H 0.07 -0.12 8.12 -51.93 -0.42 -0.54 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.09 8.11 -51.93 -0.42 -0.51 16 35 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 36 H 0.10 -0.12 7.69 -51.93 -0.40 -0.52 16 37 H 0.09 -0.26 7.94 -51.92 -0.41 -0.67 16 38 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 39 H 0.38 -1.88 8.63 45.56 0.39 -1.49 16 40 H -0.25 0.13 6.77 56.52 0.38 0.51 16 41 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 42 H 0.15 -0.22 6.30 -52.48 -0.33 -0.55 16 43 H 0.10 -0.28 7.90 -51.93 -0.41 -0.69 16 44 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 361.06 15.07 5.44 5.44 Total: 0.00 -9.74 361.06 -10.50 -20.24 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -6.51 Total: -13.30 kcal Atomic # 6 Polarization: 3.04 SS G_CDS: -3.97 Total: -0.93 kcal Atomic # 7 Polarization: -2.05 SS G_CDS: 0.16 Total: -1.89 kcal Atomic # 8 Polarization: -2.29 SS G_CDS: -0.30 Total: -2.59 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.32 Total: -6.97 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.74 -10.50 -20.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_16915396.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.591 kcal (2) G-P(sol) polarization free energy of solvation -9.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.241 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds