Wall clock time and date at job start Sun Mar 7 2021 06:08:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.52999 * 109.47191 * 291.04560 * 3 2 1 5 5 H 1.09007 * 112.85102 * 316.20034 * 4 3 2 6 6 C 1.53782 * 113.61420 * 185.00132 * 4 3 2 7 7 C 1.53784 * 87.07934 * 220.01888 * 6 4 3 8 8 H 1.09002 * 113.60950 * 140.06039 * 7 6 4 9 9 N 1.46499 * 113.61884 * 270.88274 * 7 6 4 10 10 C 1.34765 * 120.00218 * 203.47542 * 9 7 6 11 11 O 1.21624 * 120.00176 * 359.97438 * 10 9 7 12 12 C 1.47262 * 120.00253 * 179.97438 * 10 9 7 13 13 C 1.36332 * 126.97298 * 179.97438 * 12 10 9 14 14 C 1.51201 * 126.76311 * 0.04645 * 13 12 10 15 15 C 1.53392 * 108.15181 * 164.33767 * 14 13 12 16 16 C 1.53160 * 109.11241 * 48.44304 * 15 14 13 17 17 C 1.53126 * 109.52290 * 290.37688 * 16 15 14 18 18 N 1.35214 * 108.66529 * 180.02562 * 13 12 10 19 19 C 1.36431 * 109.89509 * 359.96069 * 18 13 12 20 20 C 1.50701 * 125.49321 * 180.02562 * 19 18 13 21 21 O 1.42910 * 109.46844 * 30.00091 * 20 19 18 22 22 Si 1.86301 * 109.47120 * 149.99963 * 20 19 18 23 23 C 1.34491 * 109.01259 * 0.03192 * 19 18 13 24 24 C 1.53781 * 87.17526 * 25.47554 * 7 6 4 25 25 H 1.09001 * 109.46811 * 171.04868 * 3 2 1 26 26 H 1.08993 * 109.46790 * 51.04736 * 3 2 1 27 27 H 1.08996 * 113.61147 * 105.47761 * 6 4 3 28 28 H 1.08998 * 113.61523 * 334.56809 * 6 4 3 29 29 H 0.97007 * 119.99406 * 23.47319 * 9 7 6 30 30 H 1.09004 * 109.80876 * 44.65117 * 14 13 12 31 31 H 1.09002 * 109.70428 * 283.97097 * 14 13 12 32 32 H 1.09002 * 109.54525 * 288.52966 * 15 14 13 33 33 H 1.08999 * 109.53833 * 168.35347 * 15 14 13 34 34 H 1.09004 * 109.46106 * 50.39644 * 16 15 14 35 35 H 1.09001 * 109.46267 * 170.36878 * 16 15 14 36 36 H 1.09004 * 109.56501 * 170.83574 * 17 16 15 37 37 H 1.09007 * 109.56464 * 291.05736 * 17 16 15 38 38 H 1.09002 * 109.47205 * 270.00235 * 20 19 18 39 39 H 0.96696 * 113.99842 * 60.00108 * 21 20 19 40 40 H 1.48497 * 109.99425 * 58.68473 * 22 20 19 41 41 H 1.48497 * 109.99814 * 180.02562 * 22 20 19 42 42 H 1.08008 * 126.81618 * 179.97438 * 23 19 18 43 43 H 1.08997 * 113.61465 * 89.06900 * 24 7 6 44 44 H 1.09000 * 113.61578 * 219.97916 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1183 -0.5171 1.3463 5 1 2.5756 -0.0986 2.1940 6 6 4.6470 -0.4423 1.4957 7 6 4.5676 -1.8135 2.1876 8 1 5.3750 -2.4906 1.9086 9 7 4.3709 -1.7291 3.6368 10 6 4.7437 -2.7542 4.4283 11 8 5.2430 -3.7496 3.9393 12 6 4.5465 -2.6692 5.8852 13 6 4.8684 -3.6151 6.8127 14 6 5.5012 -4.9627 6.5490 15 6 6.0333 -5.5094 7.8797 16 6 4.9415 -5.3827 8.9464 17 6 4.7264 -3.9050 9.2853 18 7 4.5276 -3.1539 8.0373 19 6 3.9826 -1.9079 7.9290 20 6 3.4821 -1.0690 9.0765 21 8 4.2321 -1.3760 10.2536 22 14 3.6874 0.7357 8.6624 23 6 3.9638 -1.5490 6.6330 24 6 3.2668 -2.0495 1.4021 25 1 2.9708 1.0160 -0.1599 26 1 2.9716 -0.6452 -0.7991 27 1 4.9826 0.3596 2.1532 28 1 5.1801 -0.4630 0.5453 29 1 3.9724 -0.9353 4.0268 30 1 6.3234 -4.8527 5.8418 31 1 4.7553 -5.6458 6.1428 32 1 6.9094 -4.9372 8.1849 33 1 6.3061 -6.5579 7.7601 34 1 4.0121 -5.8074 8.5670 35 1 5.2466 -5.9204 9.8441 36 1 3.8452 -3.8002 9.9184 37 1 5.6007 -3.5198 9.8102 38 1 2.4278 -1.2841 9.2511 39 1 5.1808 -1.2086 10.1702 40 1 2.9379 1.0606 7.4223 41 1 3.1981 1.5736 9.7865 42 1 3.5931 -0.6207 6.2238 43 1 3.4233 -2.5087 0.4260 44 1 2.4890 -2.5441 1.9839 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_16915396.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:29 Heat of formation + Delta-G solvation = 22.236248 kcal Electronic energy + Delta-G solvation = -26425.238786 eV Core-core repulsion = 22731.168869 eV Total energy + Delta-G solvation = -3694.069916 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.79106 -41.02562 -39.27541 -37.93373 -37.45739 -36.84253 -34.46436 -33.46318 -31.25631 -31.04178 -29.31496 -26.63369 -26.56548 -24.87212 -24.63089 -23.44074 -21.71773 -21.25901 -20.23225 -19.52991 -18.99549 -18.42365 -17.28173 -17.03806 -16.72570 -16.56664 -16.05799 -15.94749 -15.68080 -15.46211 -15.36731 -15.17671 -15.08575 -14.75126 -14.68116 -14.46406 -14.27398 -14.01581 -13.90453 -13.61963 -13.30830 -13.21346 -13.04393 -12.66269 -12.32908 -12.30694 -12.11640 -11.99029 -11.84063 -11.81232 -11.74657 -11.40742 -11.05716 -10.88350 -10.69876 -10.01197 -9.57003 -9.05803 -4.93097 0.72183 1.06304 1.38584 1.66926 1.81478 1.83057 1.87909 2.03662 2.42450 2.53973 3.10546 3.34466 3.47473 3.57945 3.59500 3.69375 3.76886 3.80024 3.82998 3.96485 4.02097 4.17006 4.32548 4.35302 4.41105 4.43807 4.44253 4.60999 4.71616 4.74648 4.79285 4.80801 4.82240 4.91202 4.95249 4.98917 5.01703 5.03099 5.14428 5.19128 5.22791 5.24493 5.36465 5.69806 5.76710 6.03476 6.21580 6.61969 6.67518 6.68364 7.37904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.520 5.520 2 C 0.233 3.767 3 C -0.014 4.014 4 C -0.101 4.101 5 H 0.091 0.909 6 C -0.114 4.114 7 C 0.108 3.892 8 H 0.087 0.913 9 N -0.702 5.702 10 C 0.590 3.410 11 O -0.587 6.587 12 C -0.257 4.257 13 C 0.106 3.894 14 C -0.053 4.053 15 C -0.123 4.123 16 C -0.137 4.137 17 C 0.105 3.895 18 N -0.425 5.425 19 C -0.010 4.010 20 C -0.048 4.048 21 O -0.552 6.552 22 Si 0.800 3.200 23 C -0.173 4.173 24 C -0.156 4.156 25 H 0.146 0.854 26 H 0.138 0.862 27 H 0.091 0.909 28 H 0.126 0.874 29 H 0.410 0.590 30 H 0.085 0.915 31 H 0.074 0.926 32 H 0.075 0.925 33 H 0.087 0.913 34 H 0.061 0.939 35 H 0.109 0.891 36 H 0.094 0.906 37 H 0.105 0.895 38 H 0.109 0.891 39 H 0.394 0.606 40 H -0.274 1.274 41 H -0.295 1.295 42 H 0.163 0.837 43 H 0.108 0.892 44 H 0.044 0.956 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.614 3.237 2.417 8.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.198 5.198 2 C -0.083 4.083 3 C -0.053 4.053 4 C -0.121 4.121 5 H 0.110 0.890 6 C -0.152 4.152 7 C 0.002 3.998 8 H 0.105 0.895 9 N -0.352 5.352 10 C 0.380 3.620 11 O -0.469 6.469 12 C -0.266 4.266 13 C -0.012 4.012 14 C -0.091 4.091 15 C -0.160 4.160 16 C -0.174 4.174 17 C -0.015 4.015 18 N -0.101 5.101 19 C -0.119 4.119 20 C -0.157 4.157 21 O -0.359 6.359 22 Si 0.703 3.297 23 C -0.196 4.196 24 C -0.195 4.195 25 H 0.163 0.837 26 H 0.155 0.845 27 H 0.109 0.891 28 H 0.144 0.856 29 H 0.246 0.754 30 H 0.103 0.897 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.106 0.894 34 H 0.080 0.920 35 H 0.127 0.873 36 H 0.112 0.888 37 H 0.123 0.877 38 H 0.126 0.874 39 H 0.244 0.756 40 H -0.200 1.200 41 H -0.222 1.222 42 H 0.180 0.820 43 H 0.126 0.874 44 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges 5.306 2.992 2.518 6.592 hybrid contribution -0.762 -0.510 0.175 0.933 sum 4.545 2.482 2.693 5.837 Atomic orbital electron populations 1.81308 1.15902 1.11662 1.10957 1.30177 0.96217 0.90821 0.91061 1.19734 0.78156 1.07575 0.99865 1.22578 0.97513 0.95238 0.96789 0.89050 1.23326 0.94139 0.95116 1.02614 1.21929 0.98264 1.00374 0.79204 0.89515 1.45386 1.63478 1.19643 1.06678 1.17545 0.76407 0.82318 0.85700 1.90734 1.46837 1.32634 1.76670 1.19982 1.16251 0.98381 0.92015 1.20599 0.99901 0.96665 0.84076 1.20478 1.00076 0.89735 0.98806 1.21694 0.98286 1.02898 0.93133 1.21945 0.99758 0.94522 1.01181 1.22296 1.04491 0.91549 0.83137 1.44042 1.45987 1.13304 1.06747 1.20947 1.06590 0.87684 0.96653 1.25009 0.97429 1.09685 0.83612 1.86463 1.25092 1.89770 1.34588 0.93156 0.89559 0.70332 0.76693 1.21924 1.06545 0.99751 0.91426 1.23704 0.97427 0.96735 1.01588 0.83651 0.84472 0.89067 0.85566 0.75383 0.89706 0.90736 0.90617 0.89413 0.91970 0.87266 0.88806 0.87681 0.87365 0.75563 1.20028 1.22234 0.81990 0.87364 0.93710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.57 18.54 20.01 0.37 -5.20 16 2 C 0.23 0.22 15.42 89.44 1.38 1.59 16 3 C -0.01 0.15 5.54 28.79 0.16 0.31 16 4 C -0.10 0.89 3.51 -10.17 -0.04 0.86 16 5 H 0.09 -0.67 8.12 -2.38 -0.02 -0.69 16 6 C -0.11 1.23 7.38 31.12 0.23 1.46 16 7 C 0.11 -0.25 4.29 45.52 0.20 -0.06 16 8 H 0.09 0.16 7.50 -2.39 -0.02 0.14 16 9 N -0.70 -0.41 5.26 -443.47 -2.33 -2.74 16 10 C 0.59 4.67 7.81 86.62 0.68 5.35 16 11 O -0.59 -8.65 14.96 -4.11 -0.06 -8.71 16 12 C -0.26 -1.53 6.28 -19.12 -0.12 -1.65 16 13 C 0.11 0.53 6.57 41.75 0.27 0.81 16 14 C -0.05 -0.20 5.33 30.14 0.16 -0.03 16 15 C -0.12 0.32 5.97 30.78 0.18 0.50 16 16 C -0.14 0.60 5.92 30.69 0.18 0.78 16 17 C 0.10 -0.40 5.32 86.32 0.46 0.06 16 18 N -0.42 -0.42 3.11 -493.37 -1.53 -1.96 16 19 C -0.01 0.00 6.15 40.99 0.25 0.25 16 20 C -0.05 0.15 2.99 71.24 0.21 0.36 16 21 O -0.55 2.36 10.68 -148.98 -1.59 0.77 16 22 Si 0.80 -4.04 31.29 68.60 2.15 -1.89 16 23 C -0.17 -0.19 9.09 23.64 0.21 0.03 16 24 C -0.16 0.53 7.45 31.21 0.23 0.76 16 25 H 0.15 -2.40 8.14 -2.39 -0.02 -2.42 16 26 H 0.14 -2.08 7.85 -2.39 -0.02 -2.10 16 27 H 0.09 -1.10 8.14 -2.39 -0.02 -1.11 16 28 H 0.13 -1.86 8.10 -2.39 -0.02 -1.88 16 29 H 0.41 -1.64 7.83 -92.70 -0.73 -2.37 16 30 H 0.08 0.56 7.41 -2.38 -0.02 0.54 16 31 H 0.07 0.42 8.14 -2.39 -0.02 0.40 16 32 H 0.08 -0.26 8.12 -2.39 -0.02 -0.28 16 33 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 34 H 0.06 -0.11 8.11 -2.38 -0.02 -0.13 16 35 H 0.11 -0.89 8.14 -2.39 -0.02 -0.91 16 36 H 0.09 -0.29 7.69 -2.38 -0.02 -0.31 16 37 H 0.11 -0.79 7.94 -2.38 -0.02 -0.81 16 38 H 0.11 -0.16 7.96 -2.39 -0.02 -0.18 16 39 H 0.39 -4.47 8.63 -74.06 -0.64 -5.11 16 40 H -0.27 0.42 6.77 99.48 0.67 1.09 16 41 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 42 H 0.16 -0.52 6.30 -2.91 -0.02 -0.54 16 43 H 0.11 -0.65 7.90 -2.39 -0.02 -0.67 16 44 H 0.04 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -27.21 361.06 1.33 -25.88 By element: Atomic # 1 Polarization: -17.21 SS G_CDS: -0.33 Total: -17.54 kcal Atomic # 6 Polarization: 6.73 SS G_CDS: 4.66 Total: 11.39 kcal Atomic # 7 Polarization: -6.40 SS G_CDS: -3.50 Total: -9.90 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -1.65 Total: -7.94 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.15 Total: -1.89 kcal Total: -27.21 1.33 -25.88 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_16915396.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.120 kcal (2) G-P(sol) polarization free energy of solvation -27.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.884 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds