Wall clock time and date at job start Sun Mar 7 2021 06:08:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 C 1.52998 * 109.47095 * 153.65725 * 3 2 1 5 5 H 1.08998 * 112.91430 * 43.74408 * 4 3 2 6 6 C 1.54062 * 113.61745 * 272.49165 * 4 3 2 7 7 C 1.53780 * 86.98566 * 220.02237 * 6 4 3 8 8 H 1.09001 * 113.61408 * 140.02138 * 7 6 4 9 9 N 1.46499 * 113.61349 * 270.83860 * 7 6 4 10 10 C 1.34779 * 120.00024 * 254.13894 * 9 7 6 11 11 O 1.21606 * 119.99949 * 0.02562 * 10 9 7 12 12 C 1.47377 * 119.99860 * 179.97438 * 10 9 7 13 13 C 1.36423 * 127.18882 * 180.02562 * 12 10 9 14 14 C 1.50699 * 125.80387 * 359.97438 * 13 12 10 15 15 O 1.42894 * 109.47024 * 89.99917 * 14 13 12 16 16 C 1.35905 * 117.00217 * 180.02562 * 15 14 13 17 17 C 1.38728 * 120.05539 * 180.02562 * 16 15 14 18 18 C 1.38153 * 119.93918 * 180.02562 * 17 16 15 19 19 C 1.38260 * 120.05718 * 0.02562 * 18 17 16 20 20 C 1.50696 * 119.94431 * 179.97438 * 19 18 17 21 21 O 1.42903 * 109.47278 * 300.00307 * 20 19 18 22 22 Si 1.86300 * 109.47355 * 180.02562 * 20 19 18 23 23 C 1.38268 * 120.11273 * 0.25759 * 19 18 17 24 24 C 1.38148 * 120.05255 * 359.44588 * 23 19 18 25 25 O 1.33649 * 108.39481 * 180.24320 * 13 12 10 26 26 C 1.34221 * 110.91186 * 359.58871 * 25 13 12 27 27 C 1.34181 * 109.11771 * 0.41543 * 26 25 13 28 28 C 1.53777 * 87.17369 * 25.42973 * 7 6 4 29 29 H 1.09001 * 109.47571 * 33.65538 * 3 2 1 30 30 H 1.09005 * 109.47413 * 273.65133 * 3 2 1 31 31 H 1.08997 * 113.69020 * 105.50005 * 6 4 3 32 32 H 1.08999 * 113.60993 * 334.52814 * 6 4 3 33 33 H 0.97002 * 120.00558 * 74.13545 * 9 7 6 34 34 H 1.09003 * 109.46733 * 329.99926 * 14 13 12 35 35 H 1.08997 * 109.47329 * 210.00061 * 14 13 12 36 36 H 1.07991 * 120.03062 * 0.04023 * 17 16 15 37 37 H 1.08000 * 119.96925 * 179.97438 * 18 17 16 38 38 H 1.08997 * 109.47214 * 60.00282 * 20 19 18 39 39 H 0.96700 * 114.00022 * 180.02562 * 21 20 19 40 40 H 1.48506 * 110.00048 * 298.68478 * 22 20 19 41 41 H 1.48502 * 109.99996 * 59.99803 * 22 20 19 42 42 H 1.07998 * 119.97204 * 179.70510 * 23 19 18 43 43 H 1.08000 * 120.02468 * 180.29669 * 24 23 19 44 44 H 1.08001 * 125.44322 * 180.16842 * 26 25 13 45 45 H 1.08004 * 127.01630 * 179.73632 * 27 26 25 46 46 H 1.08991 * 113.61665 * 89.07465 * 28 7 6 47 47 H 1.09007 * 113.61033 * 219.89190 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 6 3.1173 1.2936 -0.6401 5 1 2.5746 2.1766 -0.3028 6 6 3.2652 1.2077 -2.1712 7 6 4.5658 2.0121 -2.0093 8 1 5.3730 1.6723 -2.6582 9 7 4.3685 3.4629 -2.0590 10 6 4.7404 4.1566 -3.1531 11 8 5.2394 3.5780 -4.0992 12 6 4.5414 5.6160 -3.2032 13 6 4.8606 6.4570 -4.2288 14 6 5.4916 6.0530 -5.5364 15 8 4.4677 5.7396 -6.4826 16 6 4.8701 5.3534 -7.7219 17 6 3.9291 5.0348 -8.6901 18 6 4.3408 4.6419 -9.9490 19 6 5.6894 4.5656 -10.2441 20 6 6.1357 4.1362 -11.6179 21 8 5.6475 2.8206 -11.8878 22 14 7.9971 4.1350 -11.6940 23 6 6.6294 4.8770 -9.2790 24 6 6.2227 5.2763 -8.0206 25 8 4.5240 7.7009 -3.8745 26 6 3.9810 7.7192 -2.6472 27 6 3.9573 6.4697 -2.1585 28 6 4.6460 1.4499 -0.5802 29 1 2.9717 -0.8546 -0.5695 30 1 2.9714 -0.0646 1.0256 31 1 2.4869 1.7410 -2.7170 32 1 3.4220 0.1935 -2.5384 33 1 3.9701 3.9244 -1.3045 34 1 6.1223 5.1778 -5.3803 35 1 6.0983 6.8749 -5.9163 36 1 2.8756 5.0941 -8.4601 37 1 3.6086 4.3934 -10.7030 38 1 5.7418 4.8295 -12.3611 39 1 5.8977 2.4789 -12.7572 40 1 8.5166 5.5040 -11.4462 41 1 8.5461 3.1933 -10.6855 42 1 7.6822 4.8120 -9.5105 43 1 6.9573 5.5240 -7.2686 44 1 3.6240 8.5994 -2.1333 45 1 3.5855 6.1556 -1.1944 46 1 5.1796 0.5019 -0.5133 47 1 4.9832 2.1784 0.1572 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:08:55 Heat of formation + Delta-G solvation = -1.305719 kcal Electronic energy + Delta-G solvation = -31928.188933 eV Core-core repulsion = 27432.018884 eV Total energy + Delta-G solvation = -4496.170048 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.145 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.78235 -41.43199 -41.25426 -39.56258 -39.21022 -37.50355 -37.26355 -34.90364 -33.94746 -32.98887 -32.14891 -31.57062 -31.05849 -28.03651 -26.64339 -26.22739 -25.39413 -24.06754 -23.81469 -22.46918 -22.22960 -21.14034 -20.17705 -19.65859 -19.31462 -18.53817 -18.36235 -17.73645 -17.29882 -17.15231 -17.06716 -16.79811 -16.68594 -16.14838 -16.12430 -15.87117 -15.66578 -15.51605 -15.44928 -14.94234 -14.61849 -14.54299 -14.31034 -14.08093 -14.04769 -13.91104 -13.87649 -13.69935 -13.48008 -13.38148 -13.23585 -13.08466 -12.55710 -12.37513 -12.24493 -12.11487 -11.91390 -11.87539 -11.49846 -11.22050 -11.13327 -11.02653 -10.31290 -10.22153 -10.15875 -9.87833 -9.36242 -4.95685 -0.11273 0.07816 0.13647 0.98132 1.30586 1.43617 1.63105 1.81249 1.86432 1.97037 1.99100 2.06857 2.37590 2.47012 3.07098 3.25296 3.39145 3.50267 3.53095 3.54827 3.64557 3.68939 3.69797 3.80999 3.89224 3.90694 3.95428 4.00200 4.11342 4.28813 4.38704 4.39279 4.39472 4.51828 4.55713 4.66476 4.74315 4.75782 4.77261 4.84663 4.90852 4.94555 4.99541 5.05822 5.08508 5.16265 5.21691 5.25404 5.31774 5.52707 5.60896 5.82788 6.10351 6.40973 6.66161 6.93023 7.07795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.518 5.518 2 C 0.233 3.767 3 C -0.015 4.015 4 C -0.099 4.099 5 H 0.097 0.903 6 C -0.157 4.157 7 C 0.104 3.896 8 H 0.086 0.914 9 N -0.690 5.690 10 C 0.584 3.416 11 O -0.573 6.573 12 C -0.222 4.222 13 C 0.038 3.962 14 C 0.134 3.866 15 O -0.319 6.319 16 C 0.125 3.875 17 C -0.158 4.158 18 C -0.053 4.053 19 C -0.128 4.128 20 C -0.074 4.074 21 O -0.565 6.565 22 Si 0.774 3.226 23 C -0.098 4.098 24 C -0.206 4.206 25 O -0.178 6.178 26 C -0.011 4.011 27 C -0.195 4.195 28 C -0.113 4.113 29 H 0.136 0.864 30 H 0.147 0.853 31 H 0.046 0.954 32 H 0.107 0.893 33 H 0.415 0.585 34 H 0.105 0.895 35 H 0.098 0.902 36 H 0.142 0.858 37 H 0.152 0.848 38 H 0.097 0.903 39 H 0.403 0.597 40 H -0.287 1.287 41 H -0.300 1.300 42 H 0.123 0.877 43 H 0.145 0.855 44 H 0.253 0.747 45 H 0.194 0.806 46 H 0.126 0.874 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.366 1.394 2.539 6.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.197 5.197 2 C -0.083 4.083 3 C -0.054 4.054 4 C -0.119 4.119 5 H 0.115 0.885 6 C -0.195 4.195 7 C -0.001 4.001 8 H 0.104 0.896 9 N -0.341 5.341 10 C 0.372 3.628 11 O -0.454 6.454 12 C -0.227 4.227 13 C -0.015 4.015 14 C 0.060 3.940 15 O -0.233 6.233 16 C 0.080 3.920 17 C -0.176 4.176 18 C -0.071 4.071 19 C -0.128 4.128 20 C -0.183 4.183 21 O -0.375 6.375 22 Si 0.681 3.319 23 C -0.116 4.116 24 C -0.224 4.224 25 O -0.073 6.073 26 C -0.077 4.077 27 C -0.214 4.214 28 C -0.150 4.150 29 H 0.154 0.846 30 H 0.165 0.835 31 H 0.065 0.935 32 H 0.126 0.874 33 H 0.253 0.747 34 H 0.123 0.877 35 H 0.116 0.884 36 H 0.160 0.840 37 H 0.169 0.831 38 H 0.115 0.885 39 H 0.255 0.745 40 H -0.214 1.214 41 H -0.228 1.228 42 H 0.141 0.859 43 H 0.162 0.838 44 H 0.269 0.731 45 H 0.211 0.789 46 H 0.144 0.856 47 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 4.349 1.463 2.812 5.382 hybrid contribution -0.374 0.449 0.742 0.945 sum 3.974 1.912 3.555 5.664 Atomic orbital electron populations 1.81317 1.15881 1.10907 1.11567 1.30138 0.96177 0.91129 0.90871 1.19724 0.78245 1.00467 1.06964 1.22585 0.97362 0.97533 0.94395 0.88519 1.23712 0.97197 1.01677 0.96963 1.22009 0.98548 0.78917 1.00620 0.89570 1.45352 1.62625 1.08039 1.18089 1.17434 0.77210 0.85534 0.82603 1.90784 1.46076 1.71254 1.37295 1.21417 1.09639 0.94067 0.97584 1.21965 1.01422 0.82258 0.95879 1.21125 0.88474 1.02063 0.82341 1.86051 1.35683 1.81876 1.19724 1.19121 0.93221 0.95384 0.84260 1.20736 0.99858 1.04551 0.92464 1.21033 0.95599 0.94816 0.95628 1.19680 0.94013 1.03297 0.95852 1.24758 1.11685 0.87458 0.94444 1.86447 1.79207 1.29589 1.42247 0.94511 0.72984 0.77481 0.86944 1.20827 0.98685 0.98911 0.93138 1.21312 0.94817 1.07505 0.98776 1.83790 1.61218 1.29066 1.33261 1.24951 0.98669 1.01608 0.82456 1.23261 1.05095 0.91777 1.01273 1.23323 0.94365 1.03598 0.93763 0.84634 0.83536 0.93535 0.87439 0.74739 0.87697 0.88385 0.84030 0.83060 0.88521 0.74535 1.21413 1.22837 0.85927 0.83782 0.73086 0.78878 0.85598 0.88798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.13 18.54 20.00 0.37 -4.76 16 2 C 0.23 0.00 15.42 89.44 1.38 1.38 16 3 C -0.01 0.17 5.54 28.79 0.16 0.33 16 4 C -0.10 1.01 3.51 -10.17 -0.04 0.98 16 5 H 0.10 -0.93 8.12 -2.39 -0.02 -0.95 16 6 C -0.16 0.66 7.45 31.22 0.23 0.89 16 7 C 0.10 -0.36 4.29 45.52 0.20 -0.16 16 8 H 0.09 0.11 7.50 -2.39 -0.02 0.09 16 9 N -0.69 1.02 5.26 -443.36 -2.33 -1.31 16 10 C 0.58 3.92 7.81 86.65 0.68 4.60 16 11 O -0.57 -8.31 14.46 -4.05 -0.06 -8.37 16 12 C -0.22 -1.03 6.31 -18.99 -0.12 -1.15 16 13 C 0.04 0.25 7.00 25.26 0.18 0.43 16 14 C 0.13 1.02 4.74 71.24 0.34 1.35 16 15 O -0.32 -3.88 10.12 -92.48 -0.94 -4.81 16 16 C 0.13 1.42 6.69 22.50 0.15 1.57 16 17 C -0.16 -1.51 9.99 22.37 0.22 -1.29 16 18 C -0.05 -0.40 9.60 22.25 0.21 -0.19 16 19 C -0.13 -1.02 5.42 -19.85 -0.11 -1.13 16 20 C -0.07 -0.11 2.81 71.23 0.20 0.09 16 21 O -0.56 -0.88 12.74 -148.98 -1.90 -2.78 16 22 Si 0.77 -0.20 29.78 68.60 2.04 1.84 16 23 C -0.10 -0.91 8.66 22.26 0.19 -0.71 16 24 C -0.21 -1.94 9.04 22.37 0.20 -1.74 16 25 O -0.18 -0.68 10.52 4.44 0.05 -0.63 16 26 C -0.01 0.04 12.03 66.89 0.80 0.85 16 27 C -0.20 0.63 10.60 23.65 0.25 0.88 16 28 C -0.11 1.36 7.38 31.12 0.23 1.59 16 29 H 0.14 -2.12 7.85 -2.39 -0.02 -2.14 16 30 H 0.15 -2.57 8.14 -2.38 -0.02 -2.59 16 31 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.11 -0.67 7.90 -2.39 -0.02 -0.68 16 33 H 0.42 -3.12 7.88 -92.71 -0.73 -3.85 16 34 H 0.11 0.95 6.00 -2.39 -0.01 0.93 16 35 H 0.10 0.30 7.67 -2.39 -0.02 0.28 16 36 H 0.14 1.00 8.06 -2.92 -0.02 0.98 16 37 H 0.15 0.54 8.06 -2.91 -0.02 0.51 16 38 H 0.10 -0.31 7.96 -2.39 -0.02 -0.33 16 39 H 0.40 -3.79 8.74 -74.06 -0.65 -4.44 16 40 H -0.29 -1.35 7.11 99.48 0.71 -0.64 16 41 H -0.30 -2.36 7.11 99.48 0.71 -1.65 16 42 H 0.12 0.92 4.87 -2.91 -0.01 0.91 16 43 H 0.14 0.78 6.30 -2.91 -0.02 0.76 16 44 H 0.25 -3.25 8.06 -2.91 -0.02 -3.28 16 45 H 0.19 -2.10 7.74 -2.91 -0.02 -2.12 16 46 H 0.13 -1.96 8.10 -2.39 -0.02 -1.98 16 47 H 0.09 -1.29 8.14 -2.38 -0.02 -1.31 16 Total: 0.00 -35.98 405.17 2.31 -33.67 By element: Atomic # 1 Polarization: -21.14 SS G_CDS: -0.29 Total: -21.43 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: 5.36 Total: 8.58 kcal Atomic # 7 Polarization: -4.11 SS G_CDS: -1.96 Total: -6.07 kcal Atomic # 8 Polarization: -13.74 SS G_CDS: -2.85 Total: -16.59 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: 2.04 Total: 1.84 kcal Total: -35.98 2.31 -33.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.369 kcal (2) G-P(sol) polarization free energy of solvation -35.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.675 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds