Wall clock time and date at job start Sun Mar 7 2021 06:36:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 C 1.81404 * 103.00143 * 2 1 4 4 C 1.53000 * 109.46946 * 180.02562 * 3 2 1 5 5 H 1.08990 * 112.85361 * 45.33479 * 4 3 2 6 6 C 1.53787 * 113.61270 * 176.53257 * 4 3 2 7 7 C 1.53778 * 87.08069 * 139.97924 * 6 4 3 8 8 H 1.09006 * 113.60963 * 220.01741 * 7 6 4 9 9 N 1.46498 * 113.61444 * 89.19909 * 7 6 4 10 10 C 1.34783 * 119.99720 * 154.99832 * 9 7 6 11 11 O 1.21592 * 120.00208 * 0.02562 * 10 9 7 12 12 C 1.47560 * 119.99998 * 179.97438 * 10 9 7 13 13 C 1.39836 * 119.99655 * 359.72359 * 12 10 9 14 14 C 1.36561 * 119.99594 * 179.74108 * 13 12 10 15 15 C 1.39827 * 120.00130 * 0.53776 * 14 13 12 16 16 C 1.47557 * 119.99994 * 179.71887 * 15 14 13 17 17 C 1.34981 * 125.27583 * 359.74014 * 16 15 14 18 18 C 1.37809 * 114.69714 * 179.79415 * 17 16 15 19 19 C 1.33740 * 115.07966 * 0.49488 * 18 17 16 20 20 C 1.50704 * 125.11699 * 179.74941 * 19 18 17 21 21 O 1.42895 * 109.47161 * 300.00817 * 20 19 18 22 22 Si 1.86293 * 109.47120 * 180.02562 * 20 19 18 23 23 S 1.75855 * 109.76478 * 359.73533 * 19 18 17 24 24 C 1.39824 * 120.00004 * 359.73317 * 15 14 13 25 25 C 1.36563 * 120.00250 * 359.97438 * 24 15 14 26 26 C 1.53783 * 113.61182 * 274.13530 * 4 3 2 27 27 H 1.08996 * 109.47605 * 179.97438 * 1 2 3 28 28 H 1.09007 * 109.46846 * 299.99983 * 1 2 3 29 29 H 1.09007 * 109.47453 * 59.99610 * 1 2 3 30 30 H 1.09002 * 109.47124 * 60.00087 * 3 2 1 31 31 H 1.09001 * 109.46975 * 300.00209 * 3 2 1 32 32 H 1.09000 * 113.61079 * 254.52465 * 6 4 3 33 33 H 1.09002 * 113.61333 * 25.42742 * 6 4 3 34 34 H 0.96997 * 120.00249 * 334.99374 * 9 7 6 35 35 H 1.07998 * 120.00354 * 359.97438 * 13 12 10 36 36 H 1.07994 * 120.00301 * 180.25007 * 14 13 12 37 37 H 1.07996 * 122.64687 * 0.02562 * 17 16 15 38 38 H 1.08002 * 122.45228 * 180.23191 * 18 17 16 39 39 H 1.08998 * 109.46947 * 60.00717 * 20 19 18 40 40 H 0.96705 * 114.00112 * 299.99901 * 21 20 19 41 41 H 1.48499 * 110.00245 * 58.67951 * 22 20 19 42 42 H 1.48500 * 109.99920 * 180.02562 * 22 20 19 43 43 H 1.08005 * 119.99806 * 180.02562 * 24 15 14 44 44 H 1.07996 * 120.00389 * 179.97438 * 25 24 15 45 45 H 1.09003 * 113.61584 * 334.56887 * 26 4 3 46 46 H 1.09000 * 113.61286 * 105.47141 * 26 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 6 3.7423 1.9399 -0.0006 5 1 4.2422 1.2861 -0.7152 6 6 4.1959 3.4069 -0.0859 7 6 5.2903 3.0456 0.9322 8 1 5.4569 3.8154 1.6857 9 7 6.5330 2.5745 0.3157 10 6 7.7018 2.6989 0.9753 11 8 7.7248 3.2017 2.0821 12 6 8.9534 2.2240 0.3546 13 6 8.9260 1.6396 -0.9155 14 6 10.0850 1.2048 -1.4922 15 6 11.2976 1.3338 -0.8079 16 6 12.5491 0.8584 -1.4284 17 6 12.6457 0.2804 -2.6444 18 6 13.9249 -0.0770 -3.0120 19 6 14.8713 0.1931 -2.1065 20 6 16.3392 -0.1062 -2.2711 21 8 16.5214 -1.5119 -2.4516 22 14 17.2604 0.4486 -0.7498 23 16 14.1453 0.9502 -0.6951 24 6 11.3242 1.9130 0.4644 25 6 10.1660 2.3532 1.0387 26 6 4.3664 1.9082 1.4045 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8901 29 1 -0.3634 0.5139 -0.8900 30 1 1.8032 2.2372 0.8900 31 1 1.8031 2.2371 -0.8900 32 1 4.5855 3.6872 -1.0646 33 1 3.4601 4.1143 0.2965 34 1 6.5146 2.1731 -0.5671 35 1 7.9888 1.5354 -1.4420 36 1 10.0645 0.7571 -2.4747 37 1 11.7888 0.1147 -3.2805 38 1 14.1461 -0.5448 -3.9600 39 1 16.7228 0.4247 -3.1423 40 1 16.2020 -2.0481 -1.7129 41 1 16.7251 -0.2448 0.4493 42 1 18.7092 0.1596 -0.8998 43 1 12.2609 2.0130 0.9928 44 1 10.1865 2.8002 2.0216 45 1 3.6774 2.2052 2.1952 46 1 4.8934 0.9804 1.6273 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:36:33 Heat of formation + Delta-G solvation = 17.281683 kcal Electronic energy + Delta-G solvation = -27403.063457 eV Core-core repulsion = 23477.718969 eV Total energy + Delta-G solvation = -3925.344488 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.095 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.60696 -40.47527 -39.46581 -38.84678 -37.48686 -34.85097 -33.45241 -32.30954 -30.91454 -30.28061 -29.70035 -27.28373 -26.83287 -25.01417 -24.13280 -23.83015 -23.27413 -21.85756 -20.36720 -20.31929 -19.24940 -18.67435 -17.71580 -17.44714 -17.03839 -16.70339 -16.39569 -16.31398 -16.21142 -16.18693 -15.75477 -15.61476 -15.36396 -15.07925 -14.98794 -14.63091 -14.48201 -14.41667 -14.23159 -14.00674 -13.81374 -13.70667 -13.65259 -13.42936 -13.32932 -13.11990 -12.88609 -12.56485 -12.35689 -12.19456 -12.13895 -11.61154 -11.55178 -11.31540 -10.97513 -10.93751 -10.88173 -10.65782 -10.23112 -10.10586 -9.58426 -9.05771 -8.67186 -5.12548 -0.90896 0.23536 0.30536 0.35518 0.65910 0.72268 1.16266 1.51474 1.55224 1.59139 1.84952 1.98816 2.01505 2.82308 3.21617 3.31994 3.38824 3.43571 3.58003 3.61668 3.63599 3.68972 3.75287 3.78034 4.13103 4.13471 4.14411 4.19150 4.25205 4.28185 4.32934 4.41647 4.44167 4.49384 4.56492 4.60370 4.63361 4.72577 4.74877 4.85298 4.92876 4.96021 4.98153 5.05399 5.07610 5.19940 5.24147 5.27233 5.42685 5.51800 5.69528 6.24967 6.41628 7.16897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.264 6.264 3 C -0.075 4.075 4 C -0.096 4.096 5 H 0.098 0.902 6 C -0.135 4.135 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.709 5.709 10 C 0.563 3.437 11 O -0.531 6.531 12 C -0.136 4.136 13 C -0.078 4.078 14 C -0.110 4.110 15 C 0.013 3.987 16 C -0.148 4.148 17 C -0.119 4.119 18 C -0.104 4.104 19 C -0.217 4.217 20 C -0.033 4.033 21 O -0.523 6.523 22 Si 0.648 3.352 23 S 0.134 5.866 24 C -0.120 4.120 25 C -0.048 4.048 26 C -0.142 4.142 27 H 0.102 0.898 28 H 0.077 0.923 29 H 0.076 0.924 30 H 0.083 0.917 31 H 0.083 0.917 32 H 0.078 0.922 33 H 0.099 0.901 34 H 0.401 0.599 35 H 0.130 0.870 36 H 0.134 0.866 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.128 0.872 40 H 0.378 0.622 41 H -0.240 1.240 42 H -0.234 1.234 43 H 0.131 0.869 44 H 0.142 0.858 45 H 0.094 0.906 46 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.362 1.769 -3.134 4.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.223 4.223 4 C -0.116 4.116 5 H 0.116 0.884 6 C -0.175 4.175 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.361 5.361 10 C 0.351 3.649 11 O -0.408 6.408 12 C -0.140 4.140 13 C -0.097 4.097 14 C -0.129 4.129 15 C 0.011 3.989 16 C -0.265 4.265 17 C -0.150 4.150 18 C -0.134 4.134 19 C -0.335 4.335 20 C -0.145 4.145 21 O -0.330 6.330 22 Si 0.547 3.453 23 S 0.401 5.599 24 C -0.139 4.139 25 C -0.067 4.067 26 C -0.181 4.181 27 H 0.120 0.880 28 H 0.096 0.904 29 H 0.095 0.905 30 H 0.102 0.898 31 H 0.102 0.898 32 H 0.097 0.903 33 H 0.118 0.882 34 H 0.236 0.764 35 H 0.147 0.853 36 H 0.152 0.848 37 H 0.162 0.838 38 H 0.163 0.837 39 H 0.146 0.854 40 H 0.226 0.774 41 H -0.164 1.164 42 H -0.157 1.157 43 H 0.149 0.851 44 H 0.160 0.840 45 H 0.113 0.887 46 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.316 1.746 -0.825 1.957 hybrid contribution -1.986 -0.909 -1.906 2.899 sum -2.302 0.836 -2.732 3.669 Atomic orbital electron populations 1.23395 0.94025 1.06732 1.04947 1.87033 1.07528 1.11238 1.98050 1.23427 0.99305 0.94562 1.05044 1.22390 0.92612 0.97461 0.99091 0.88377 1.23400 0.97798 0.96182 1.00142 1.21866 0.82744 0.97513 0.96472 0.87425 1.45572 1.06243 1.63110 1.21188 1.18207 0.83330 0.78288 0.85107 1.90811 1.86765 1.43810 1.19409 1.19989 0.93829 1.04173 0.95983 1.20957 0.98574 0.96241 0.93884 1.20869 0.91012 1.00648 1.00413 1.18298 0.90606 0.96395 0.93578 1.23089 0.96228 1.08048 0.99132 1.20395 0.98465 1.00504 0.95608 1.20005 0.91343 1.01332 1.00744 1.25039 1.00577 1.09268 0.98597 1.24374 0.92528 0.85305 1.12301 1.86628 1.84354 1.15515 1.46501 0.95221 0.82241 0.91844 0.76013 1.84169 0.98201 1.58995 1.18485 1.20979 0.98904 0.99483 0.94509 1.20946 0.90477 0.95386 0.99897 1.23532 0.98460 0.99738 0.96369 0.87976 0.90432 0.90470 0.89796 0.89848 0.90324 0.88230 0.76359 0.85260 0.84801 0.83755 0.83656 0.85432 0.77392 1.16385 1.15703 0.85119 0.84026 0.88729 0.90533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.25 16 2 S -0.26 -0.17 22.38 -107.50 -2.41 -2.58 16 3 C -0.08 0.12 5.76 37.16 0.21 0.34 16 4 C -0.10 0.20 3.52 -89.80 -0.32 -0.12 16 5 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 6 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 7 C 0.12 -0.08 4.33 -67.03 -0.29 -0.37 16 8 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 9 N -0.71 0.42 5.21 -53.96 -0.28 0.14 16 10 C 0.56 1.29 7.76 -12.46 -0.10 1.19 16 11 O -0.53 -3.20 15.93 5.28 0.08 -3.11 16 12 C -0.14 -0.13 5.88 -104.90 -0.62 -0.75 16 13 C -0.08 0.09 9.48 -39.59 -0.38 -0.28 16 14 C -0.11 0.10 9.48 -39.59 -0.38 -0.27 16 15 C 0.01 0.00 5.88 -104.91 -0.62 -0.61 16 16 C -0.15 -0.05 6.37 -36.94 -0.24 -0.28 16 17 C -0.12 0.04 9.64 -40.90 -0.39 -0.35 16 18 C -0.10 0.01 10.00 -41.32 -0.41 -0.40 16 19 C -0.22 0.04 5.73 -35.88 -0.21 -0.17 16 20 C -0.03 0.02 2.96 36.01 0.11 0.13 16 21 O -0.52 -0.34 12.86 -35.23 -0.45 -0.79 16 22 Si 0.65 -0.60 30.96 -169.99 -5.26 -5.86 16 23 S 0.13 -0.02 19.46 -107.50 -2.09 -2.12 16 24 C -0.12 -0.06 9.54 -39.59 -0.38 -0.44 16 25 C -0.05 -0.06 9.53 -39.59 -0.38 -0.44 16 26 C -0.14 0.12 7.44 -25.82 -0.19 -0.07 16 27 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 28 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 29 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 30 H 0.08 -0.17 7.88 -51.92 -0.41 -0.58 16 31 H 0.08 -0.18 8.14 -51.92 -0.42 -0.61 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 34 H 0.40 -1.22 6.71 -40.82 -0.27 -1.50 16 35 H 0.13 -0.52 6.38 -52.49 -0.34 -0.85 16 36 H 0.13 -0.40 6.74 -52.49 -0.35 -0.75 16 37 H 0.14 -0.33 6.88 -52.49 -0.36 -0.69 16 38 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.20 7.96 -51.93 -0.41 -0.62 16 40 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 41 H -0.24 -0.22 7.11 56.52 0.40 0.18 16 42 H -0.23 -0.40 7.11 56.52 0.40 0.00 16 43 H 0.13 -0.09 7.26 -52.48 -0.38 -0.48 16 44 H 0.14 0.18 7.64 -52.49 -0.40 -0.22 16 45 H 0.09 -0.11 7.92 -51.93 -0.41 -0.52 16 46 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 LS Contribution 407.14 15.07 6.14 6.14 Total: 0.00 -7.40 407.14 -14.27 -21.67 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -6.33 Total: -12.02 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -3.67 Total: -1.46 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.28 Total: 0.14 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.37 Total: -3.91 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.26 Total: -5.86 kcal Atomic # 16 Polarization: -0.20 SS G_CDS: -4.50 Total: -4.69 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -7.40 -14.27 -21.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.951 kcal (2) G-P(sol) polarization free energy of solvation -7.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.670 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds